FFCP PHASE1:Hg19::chr6:133007791..133007805,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:133007791..133007805,- | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_at_chr6:133007791..133007805,- | |description=CAGE_peak_at_chr6:133007791..133007805,- | ||
|id=chr6:133007791..133007805,- | |id=chr6:133007791..133007805,- | ||
|ontology_enrichment_celltype=CL:0002619!3.80e-14!3;CL:0002097!7.46e-10!2;CL:0002595!5.03e-08!5;CL:0000077!2.16e-07!19;CL:0000235!3.50e-07!10;CL:0000174!8.03e-07!3 | |ontology_enrichment_celltype=CL:0002619!3.80e-14!3;CL:0002097!7.46e-10!2;CL:0002595!5.03e-08!5;CL:0000077!2.16e-07!19;CL:0000235!3.50e-07!10;CL:0000174!8.03e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002619;7.85e-67;3!CL:0000235;2.29e-33;6!CL:0002097;1.65e-12;2!CL:0000174;8.96e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,9.82e-67,3;CL:0000235,2.56e-33,6;CL:0002194,3.03e-13,59;CL:0000576,3.03e-13,59;CL:0000040,3.03e-13,59;CL:0000559,3.03e-13,59;CL:0002009,8.10e-13,61;CL:0002097,1.48e-12,2;CL:0000839,7.31e-12,66;CL:0000557,1.09e-11,67;CL:0000766,6.91e-11,72;CL:0000174,8.31e-09,3;CL:0002078,2.57e-08,45;CL:0000763,2.87e-07,108;CL:0000049,2.87e-07,108;CL:0002087,8.01e-07,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.58e-07!14;DOID:170!4.41e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.55e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.44e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003834!5.03e-08!5;UBERON:0001533!5.03e-08!5;UBERON:0002369!8.03e-07!3;UBERON:0001235!8.03e-07!3;UBERON:0006858!8.03e-07!3 | |ontology_enrichment_uberon=UBERON:0003834!5.03e-08!5;UBERON:0001533!5.03e-08!5;UBERON:0002369!8.03e-07!3;UBERON:0001235!8.03e-07!3;UBERON:0006858!8.03e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002369;8.96e-09;3!UBERON:0001235;8.96e-09;3!UBERON:0006858;8.96e-09;3!UBERON:0002119;9.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.55e-10,76;UBERON:0001474,1.43e-09,82;UBERON:0002369,8.31e-09,3;UBERON:0001235,8.31e-09,3;UBERON:0006858,8.31e-09,3;UBERON:0004765,1.00e-08,90;UBERON:0002405,1.92e-08,93;UBERON:0002390,5.16e-08,98;UBERON:0003061,5.16e-08,98;UBERON:0001434,7.47e-08,100;UBERON:0002193,2.87e-07,108;UBERON:0002119,9.63e-07,4 | |||
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| ||
|short_description=p@chr6:133007791..133007805,- | |short_description=p@chr6:133007791..133007805,- | ||
}} | }} |
Latest revision as of 19:33, 30 July 2015
Short description: | p@chr6:133007791..133007805, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:133007791..133007805, - |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 9.82e-67 | 3 |
macrophage | 2.56e-33 | 6 |
monopoietic cell | 3.03e-13 | 59 |
monocyte | 3.03e-13 | 59 |
monoblast | 3.03e-13 | 59 |
promonocyte | 3.03e-13 | 59 |
macrophage dendritic cell progenitor | 8.10e-13 | 61 |
cortical cell of adrenal gland | 1.48e-12 | 2 |
myeloid lineage restricted progenitor cell | 7.31e-12 | 66 |
granulocyte monocyte progenitor cell | 1.09e-11 | 67 |
myeloid leukocyte | 6.91e-11 | 72 |
steroid hormone secreting cell | 8.31e-09 | 3 |
meso-epithelial cell | 2.57e-08 | 45 |
myeloid cell | 2.87e-07 | 108 |
common myeloid progenitor | 2.87e-07 | 108 |
nongranular leukocyte | 8.01e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.55e-10 | 76 |
bone element | 1.43e-09 | 82 |
adrenal gland | 8.31e-09 | 3 |
adrenal cortex | 8.31e-09 | 3 |
adrenal/interrenal gland | 8.31e-09 | 3 |
skeletal element | 1.00e-08 | 90 |
immune system | 1.92e-08 | 93 |
hematopoietic system | 5.16e-08 | 98 |
blood island | 5.16e-08 | 98 |
skeletal system | 7.47e-08 | 100 |
hemolymphoid system | 2.87e-07 | 108 |
left ovary | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.44e-07 | 14 |