FFCP PHASE1:Hg19::chr6:133691193..133691218,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:133691193..133691218,+ | |||
|coexpression_cluster_id=C980 | |coexpression_cluster_id=C980 | ||
|description=CAGE_peak_at_chr6:133691193..133691218,+ | |description=CAGE_peak_at_chr6:133691193..133691218,+ | ||
|id=chr6:133691193..133691218,+ | |id=chr6:133691193..133691218,+ | ||
|ontology_enrichment_celltype=CL:0002150!1.27e-20!3;CL:0000861!1.27e-20!3;CL:0002553!7.26e-08!1 | |ontology_enrichment_celltype=CL:0002150!1.27e-20!3;CL:0000861!1.27e-20!3;CL:0002553!7.26e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0002553;8.02e-18;1!CL:1000415;7.98e-10;2!CL:0000123;9.07e-10;2!CL:0000242;9.07e-10;2!CL:0000082;2.17e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.03e-17,1;CL:1000415,7.98e-10,2;CL:0000242,9.46e-10,2;CL:0000082,2.20e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.19e-09;29!UBERON:0001041;4.40e-09;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1324;1.79e-10;15!DOID:1325;2.58e-10;7!DOID:3904;2.58e-10;7!DOID:0050615;7.42e-10;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,1.82e-10,15;DOID:1325,2.46e-10,7;DOID:3904,2.46e-10,7;DOID:0050615,7.54e-10,16;DOID:305,1.74e-09,106;DOID:0050687,7.33e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000065!3.45e-10!53;UBERON:0008947!1.43e-09!38;UBERON:0003258!1.43e-09!38;UBERON:0001896!6.05e-09!3;UBERON:0005290!6.05e-09!3;UBERON:0010096!6.05e-09!3;UBERON:0001557!5.73e-08!19;UBERON:0002171!6.37e-08!1;UBERON:0006518!6.37e-08!1;UBERON:0008949!6.37e-08!1;UBERON:0000101!6.37e-08!1;UBERON:0002167!6.37e-08!1;UBERON:0000072!1.30e-07!46;UBERON:0002336!2.80e-07!1;UBERON:0001018!2.80e-07!1;UBERON:0002473!2.80e-07!1;UBERON:0005340!2.80e-07!1;UBERON:0002316!2.80e-07!1;UBERON:0003544!2.80e-07!1;UBERON:0001020!2.80e-07!1;UBERON:0005970!2.80e-07!1;UBERON:0002437!2.80e-07!1;UBERON:0002048!3.45e-07!22;UBERON:0000117!3.45e-07!22;UBERON:0000171!3.45e-07!22;UBERON:0000170!3.45e-07!22;UBERON:0005597!3.45e-07!22;UBERON:0000118!3.45e-07!22;UBERON:0002370!4.08e-07!4;UBERON:0005058!4.08e-07!4;UBERON:0009113!4.08e-07!4;UBERON:0003295!4.08e-07!4;UBERON:0005562!4.08e-07!4;UBERON:0001004!4.74e-07!72 | |ontology_enrichment_uberon=UBERON:0000065!3.45e-10!53;UBERON:0008947!1.43e-09!38;UBERON:0003258!1.43e-09!38;UBERON:0001896!6.05e-09!3;UBERON:0005290!6.05e-09!3;UBERON:0010096!6.05e-09!3;UBERON:0001557!5.73e-08!19;UBERON:0002171!6.37e-08!1;UBERON:0006518!6.37e-08!1;UBERON:0008949!6.37e-08!1;UBERON:0000101!6.37e-08!1;UBERON:0002167!6.37e-08!1;UBERON:0000072!1.30e-07!46;UBERON:0002336!2.80e-07!1;UBERON:0001018!2.80e-07!1;UBERON:0002473!2.80e-07!1;UBERON:0005340!2.80e-07!1;UBERON:0002316!2.80e-07!1;UBERON:0003544!2.80e-07!1;UBERON:0001020!2.80e-07!1;UBERON:0005970!2.80e-07!1;UBERON:0002437!2.80e-07!1;UBERON:0002048!3.45e-07!22;UBERON:0000117!3.45e-07!22;UBERON:0000171!3.45e-07!22;UBERON:0000170!3.45e-07!22;UBERON:0005597!3.45e-07!22;UBERON:0000118!3.45e-07!22;UBERON:0002370!4.08e-07!4;UBERON:0005058!4.08e-07!4;UBERON:0009113!4.08e-07!4;UBERON:0003295!4.08e-07!4;UBERON:0005562!4.08e-07!4;UBERON:0001004!4.74e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;8.02e-18;1!UBERON:0006518;8.02e-18;1!UBERON:0008949;8.02e-18;1!UBERON:0000101;8.02e-18;1!UBERON:0002167;8.02e-18;1!UBERON:0002048;2.83e-12;22!UBERON:0000117;2.83e-12;22!UBERON:0000171;2.83e-12;22!UBERON:0000170;2.83e-12;22!UBERON:0002370;1.94e-09;2!UBERON:0005058;1.94e-09;2!UBERON:0009113;1.94e-09;2!UBERON:0004802;2.17e-08;19!UBERON:0000115;2.17e-08;19!UBERON:0005178;2.11e-07;34!UBERON:0002224;2.11e-07;34!UBERON:0004807;2.55e-07;22!UBERON:0005181;2.70e-07;35!UBERON:0002110;5.80e-07;3!UBERON:0000065;8.52e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,7.37e-18,1;UBERON:0006518,7.37e-18,1;UBERON:0008949,7.37e-18,1;UBERON:0000101,7.37e-18,1;UBERON:0002167,7.37e-18,1;UBERON:0002048,2.83e-12,22;UBERON:0000117,2.83e-12,22;UBERON:0000171,2.83e-12,22;UBERON:0000170,2.83e-12,22;UBERON:0005597,2.83e-12,22;UBERON:0000118,2.83e-12,22;UBERON:0004807,1.14e-09,28;UBERON:0004802,2.20e-08,19;UBERON:0000115,2.20e-08,19;UBERON:0005178,4.80e-08,34;UBERON:0002224,4.80e-08,34;UBERON:0005181,8.02e-08,35;UBERON:0000065,1.25e-07,54;UBERON:0005153,2.06e-07,37;UBERON:0008947,3.18e-07,38;UBERON:0003258,3.18e-07,38;UBERON:0005911,4.92e-07,82;UBERON:0002110,5.80e-07,3;UBERON:0006242,5.80e-07,3 | |||
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|short_description=p@chr6:133691193..133691218,+ | |short_description=p@chr6:133691193..133691218,+ | ||
}} | }} |
Latest revision as of 19:37, 30 July 2015
Short description: | p@chr6:133691193..133691218, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:133691193..133691218, + |
Coexpression cluster: | C980_gall_epitheloid_merkel_Hep2_cervical_bronchogenic_leiomyoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.03e-17 | 1 |
epithelial cell of gall bladder | 7.98e-10 | 2 |
Merkel cell | 9.46e-10 | 2 |
epithelial cell of lung | 2.20e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 7.37e-18 | 1 |
right lung lobe | 7.37e-18 | 1 |
lower lobe of lung | 7.37e-18 | 1 |
lobe of lung | 7.37e-18 | 1 |
right lung | 7.37e-18 | 1 |
lung | 2.83e-12 | 22 |
respiratory tube | 2.83e-12 | 22 |
respiration organ | 2.83e-12 | 22 |
pair of lungs | 2.83e-12 | 22 |
lung primordium | 2.83e-12 | 22 |
lung bud | 2.83e-12 | 22 |
respiratory system epithelium | 1.14e-09 | 28 |
respiratory tract epithelium | 2.20e-08 | 19 |
lung epithelium | 2.20e-08 | 19 |
thoracic cavity element | 4.80e-08 | 34 |
thoracic cavity | 4.80e-08 | 34 |
thoracic segment organ | 8.02e-08 | 35 |
respiratory tract | 1.25e-07 | 54 |
epithelial bud | 2.06e-07 | 37 |
respiratory primordium | 3.18e-07 | 38 |
endoderm of foregut | 3.18e-07 | 38 |
endo-epithelium | 4.92e-07 | 82 |
gallbladder | 5.80e-07 | 3 |
gall bladder primordium | 5.80e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 1.82e-10 | 15 |
bronchus cancer | 2.46e-10 | 7 |
bronchogenic carcinoma | 2.46e-10 | 7 |
respiratory system cancer | 7.54e-10 | 16 |
carcinoma | 1.74e-09 | 106 |
cell type cancer | 7.33e-07 | 143 |