FFCP PHASE1:Hg19::chr6:138200237..138200251,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:138200237..138200251,+ | |||
|coexpression_cluster_id=C2120 | |||
|description=CAGE_peak_at_chr6:138200237..138200251,+ | |description=CAGE_peak_at_chr6:138200237..138200251,+ | ||
|id=chr6:138200237..138200251,+ | |id=chr6:138200237..138200251,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.00e-25!140;CL:0002057!6.57e-25!42;CL:0000860!1.09e-22!45;CL:0000766!6.93e-22!76;CL:0002087!1.19e-18!119;CL:0002031!8.84e-18!124;CL:0000037!1.20e-17!172;CL:0000566!1.20e-17!172;CL:0000839!1.03e-16!70;CL:0000988!1.21e-16!182;CL:0000557!2.36e-16!71;CL:0002032!3.32e-16!165;CL:0000837!3.32e-16!165;CL:0002194!8.07e-15!63;CL:0000576!8.07e-15!63;CL:0000040!8.07e-15!63;CL:0000559!8.07e-15!63;CL:0002009!3.97e-14!65;CL:0000763!2.61e-13!112;CL:0000049!2.61e-13!112;CL:0000623!7.33e-07!3;CL:0000825!7.33e-07!3 | |ontology_enrichment_celltype=CL:0000738!3.00e-25!140;CL:0002057!6.57e-25!42;CL:0000860!1.09e-22!45;CL:0000766!6.93e-22!76;CL:0002087!1.19e-18!119;CL:0002031!8.84e-18!124;CL:0000037!1.20e-17!172;CL:0000566!1.20e-17!172;CL:0000839!1.03e-16!70;CL:0000988!1.21e-16!182;CL:0000557!2.36e-16!71;CL:0002032!3.32e-16!165;CL:0000837!3.32e-16!165;CL:0002194!8.07e-15!63;CL:0000576!8.07e-15!63;CL:0000040!8.07e-15!63;CL:0000559!8.07e-15!63;CL:0002009!3.97e-14!65;CL:0000763!2.61e-13!112;CL:0000049!2.61e-13!112;CL:0000623!7.33e-07!3;CL:0000825!7.33e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.26e-21;33!CL:0002057;9.26e-21;33!CL:0000094;3.12e-20;8!CL:0000097;4.82e-19;5!CL:0000473;1.61e-16;39!CL:0000234;1.61e-16;39!CL:0000081;8.60e-15;11!CL:0000766;2.10e-14;69!CL:0000775;2.19e-14;3!CL:0000163;7.77e-11;9!CL:0000763;3.40e-10;100!CL:0000576;1.19e-08;48!CL:0002087;3.54e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.55e-33,72;CL:0000738,1.01e-23,136;CL:0000763,3.40e-21,108;CL:0000049,3.40e-21,108;CL:0000094,2.56e-20,8;CL:0000839,8.81e-20,66;CL:0002032,1.16e-19,161;CL:0000837,1.16e-19,161;CL:0000557,1.83e-19,67;CL:0000097,4.40e-19,5;CL:0002028,4.40e-19,5;CL:0000037,9.69e-19,168;CL:0000860,4.32e-18,42;CL:0002057,4.32e-18,42;CL:0000988,1.17e-17,177;CL:0002031,2.88e-16,120;CL:0000473,1.10e-15,48;CL:0000234,1.10e-15,48;CL:0000081,7.45e-15,11;CL:0000775,1.73e-14,3;CL:0002194,2.59e-12,59;CL:0000576,2.59e-12,59;CL:0000040,2.59e-12,59;CL:0000559,2.59e-12,59;CL:0002009,7.07e-12,61;CL:0000163,7.39e-11,9;CL:0002087,1.75e-10,115;CL:0000134,1.48e-08,354;CL:0002320,2.47e-08,361;CL:0000219,1.49e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;9.17e-12;42!CL:0000049;6.38e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.23e-15!102;UBERON:0003061!4.23e-15!102;UBERON:0002371!1.53e-13!80;UBERON:0002193!7.85e-13!112;UBERON:0001474!5.20e-12!86;UBERON:0002405!1.31e-10!115;UBERON:0004765!4.98e-09!101;UBERON:0001434!4.98e-09!101;UBERON:0003081!5.71e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!4.23e-15!102;UBERON:0003061!4.23e-15!102;UBERON:0002371!1.53e-13!80;UBERON:0002193!7.85e-13!112;UBERON:0001474!5.20e-12!86;UBERON:0002405!1.31e-10!115;UBERON:0004765!4.98e-09!101;UBERON:0001434!4.98e-09!101;UBERON:0003081!5.71e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.59e-17,76;UBERON:0001474,1.28e-15,82;UBERON:0004765,4.36e-14,90;UBERON:0002405,1.41e-13,93;UBERON:0002390,8.45e-13,98;UBERON:0003061,8.45e-13,98;UBERON:0001434,1.65e-12,100;UBERON:0002193,1.87e-11,108;UBERON:0002384,4.95e-08,371;UBERON:0002204,8.98e-07,167 | |||
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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,1.15148819429164,0.154816123316076,0,0,0,0,0,0,0,0.802177789880567,0.434021741431704,0.223915474239924,0,0,0,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0.575384784644301,0.768482119587302,0,2.75796544589295,4.51839278508678,6.77132432971709,0.941211697713023,0,0.674170453335254,2.44867113896722,2.24650318953266,3.83602275479425,0.329851300186716,0,0,1.45104619314292,0.56738522469114,3.73693349397345,0.251248665256743,0,0.217188844705117,0,1.10483290796269,0.632924774881769,0,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0.786021525498329,1.02800749499755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0.80642697289893,1.06976078313403,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.46381215946779,9.80015683235338,2.77733353538036,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,1.50939302401662,0.385029108839245,0,0,0,0,0,0,8.97484377612075,1.65766205374414,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.192190067365106,0,0,0,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0.492339221844278,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.115233987555779,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0,0,0,0,0.217716747896961,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:138200237..138200251,+ | |short_description=p@chr6:138200237..138200251,+ | ||
}} | }} |
Latest revision as of 20:05, 30 July 2015
Short description: | p@chr6:138200237..138200251, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:138200237..138200251, + |
Coexpression cluster: | C2120_CD14_Mast_Neutrophils_CD4_Natural_CD8_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.55e-33 | 72 |
leukocyte | 1.01e-23 | 136 |
myeloid cell | 3.40e-21 | 108 |
common myeloid progenitor | 3.40e-21 | 108 |
granulocyte | 2.56e-20 | 8 |
myeloid lineage restricted progenitor cell | 8.81e-20 | 66 |
hematopoietic oligopotent progenitor cell | 1.16e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.16e-19 | 161 |
granulocyte monocyte progenitor cell | 1.83e-19 | 67 |
mast cell | 4.40e-19 | 5 |
basophil mast progenitor cell | 4.40e-19 | 5 |
hematopoietic stem cell | 9.69e-19 | 168 |
classical monocyte | 4.32e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.32e-18 | 42 |
hematopoietic cell | 1.17e-17 | 177 |
hematopoietic lineage restricted progenitor cell | 2.88e-16 | 120 |
defensive cell | 1.10e-15 | 48 |
phagocyte | 1.10e-15 | 48 |
blood cell | 7.45e-15 | 11 |
neutrophil | 1.73e-14 | 3 |
monopoietic cell | 2.59e-12 | 59 |
monocyte | 2.59e-12 | 59 |
monoblast | 2.59e-12 | 59 |
promonocyte | 2.59e-12 | 59 |
macrophage dendritic cell progenitor | 7.07e-12 | 61 |
endocrine cell | 7.39e-11 | 9 |
nongranular leukocyte | 1.75e-10 | 115 |
mesenchymal cell | 1.48e-08 | 354 |
connective tissue cell | 2.47e-08 | 361 |
motile cell | 1.49e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.59e-17 | 76 |
bone element | 1.28e-15 | 82 |
skeletal element | 4.36e-14 | 90 |
immune system | 1.41e-13 | 93 |
hematopoietic system | 8.45e-13 | 98 |
blood island | 8.45e-13 | 98 |
skeletal system | 1.65e-12 | 100 |
hemolymphoid system | 1.87e-11 | 108 |
connective tissue | 4.95e-08 | 371 |
musculoskeletal system | 8.98e-07 | 167 |