FFCP PHASE1:Hg19::chr6:153603882..153603892,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000492974_5end | |association_with_transcript=1bp_to_ENST00000492974_5end | ||
|cluster_id=chr6:153603882..153603892,- | |||
|coexpression_cluster_id=C527 | |coexpression_cluster_id=C527 | ||
|description=CAGE_peak_1_at_ENST00000492974_5end | |description=CAGE_peak_1_at_ENST00000492974_5end | ||
|id=chr6:153603882..153603892,- | |id=chr6:153603882..153603892,- | ||
|ontology_enrichment_celltype=CL:0000542;4.48e-11;53!CL:0000791;6.52e-10;18!CL:0000789;6.52e-10;18!CL:0002419;6.52e-10;18!CL:0000084;1.02e-08;25!CL:0000236;1.58e-08;13!CL:0000945;3.01e-08;24!CL:0000625;6.94e-07;11 | |ontology_enrichment_celltype=CL:0000542!6.43e-17!53;CL:0000051!6.43e-17!53;CL:0000838!1.14e-16!52;CL:0000144!1.14e-13!625;CL:0002371!1.50e-13!591;CL:0000003!3.44e-13!722;CL:0002087!1.50e-12!119;CL:0000012!4.61e-12!682;CL:0000548!6.35e-11!679;CL:0000004!6.35e-11!679;CL:0000255!6.35e-11!679;CL:0000037!1.45e-10!172;CL:0000566!1.45e-10!172;CL:0000988!5.67e-10!182;CL:0000791!6.50e-10!18;CL:0000789!6.50e-10!18;CL:0002420!6.50e-10!18;CL:0002419!6.50e-10!18;CL:0000790!6.50e-10!18;CL:0002031!1.33e-09!124;CL:0002032!1.89e-09!165;CL:0000837!1.89e-09!165;CL:0000084!1.01e-08!25;CL:0000827!1.01e-08!25;CL:0000945!3.02e-08!24;CL:0000826!3.02e-08!24;CL:0000034!3.90e-08!444;CL:0000236!4.53e-08!14;CL:0000738!4.78e-08!140;CL:0000048!3.48e-07!430;CL:0000723!5.47e-07!436;CL:0000625!6.96e-07!11 | ||
| | |ontology_enrichment_celltype_v019=CL:0000542;4.48e-11;53!CL:0000791;6.52e-10;18!CL:0000789;6.52e-10;18!CL:0002419;6.52e-10;18!CL:0000084;1.02e-08;25!CL:0000236;1.58e-08;13!CL:0000945;3.01e-08;24!CL:0000625;6.94e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.43e-17,53;CL:0000051,6.43e-17,53;CL:0000838,1.14e-16,52;CL:0002087,3.04e-12,115;CL:0000037,3.03e-10,168;CL:0000791,6.50e-10,18;CL:0000789,6.50e-10,18;CL:0002420,6.50e-10,18;CL:0002419,6.50e-10,18;CL:0000790,6.50e-10,18;CL:0000988,9.45e-10,177;CL:0002031,2.67e-09,120;CL:0002032,3.87e-09,161;CL:0000837,3.87e-09,161;CL:0000084,1.01e-08,25;CL:0000827,1.01e-08,25;CL:0000945,3.02e-08,24;CL:0000826,3.02e-08,24;CL:0000236,4.53e-08,14;CL:0000034,6.54e-08,441;CL:0000738,9.41e-08,136;CL:0000048,5.59e-07,427;CL:0000625,6.96e-07,11;CL:0000723,8.74e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000051;4.48e-11;53!CL:0000790;6.52e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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170998173,1983.3572618801 | ||
|short_description=p1@ENST00000492974 | |short_description=p1@ENST00000492974 | ||
}} | }} |
Latest revision as of 21:08, 30 July 2015
Short description: | p1@ENST00000492974 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000492974_5end |
Coexpression cluster: | C527_CD4_CD8_CD19_CD34_CD133_skeletal_Mesenchymal |
Association with transcript: | 1bp_to_ENST00000492974_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.43e-17 | 53 |
common lymphoid progenitor | 6.43e-17 | 53 |
lymphoid lineage restricted progenitor cell | 1.14e-16 | 52 |
nongranular leukocyte | 3.04e-12 | 115 |
hematopoietic stem cell | 3.03e-10 | 168 |
mature alpha-beta T cell | 6.50e-10 | 18 |
alpha-beta T cell | 6.50e-10 | 18 |
immature T cell | 6.50e-10 | 18 |
mature T cell | 6.50e-10 | 18 |
immature alpha-beta T cell | 6.50e-10 | 18 |
hematopoietic cell | 9.45e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 2.67e-09 | 120 |
hematopoietic oligopotent progenitor cell | 3.87e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.87e-09 | 161 |
T cell | 1.01e-08 | 25 |
pro-T cell | 1.01e-08 | 25 |
lymphocyte of B lineage | 3.02e-08 | 24 |
pro-B cell | 3.02e-08 | 24 |
B cell | 4.53e-08 | 14 |
stem cell | 6.54e-08 | 441 |
leukocyte | 9.41e-08 | 136 |
multi fate stem cell | 5.59e-07 | 427 |
CD8-positive, alpha-beta T cell | 6.96e-07 | 11 |
somatic stem cell | 8.74e-07 | 433 |