FFCP PHASE1:Hg19::chr6:170151887..170151902,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:170151887..170151902,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr6:170151887..170151902,+ | |||
|id=chr6:170151887..170151902,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000307;1.04e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.09e-10,3;CL:0000069,1.09e-10,3;CL:0000307,1.09e-10,3;CL:0000377,1.09e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.73e-29;1!UBERON:0009117;1.89e-12;10!UBERON:0005564;1.89e-12;10!CL:0000377;1.04e-10;3!UBERON:0003056;1.04e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!3.42e-08!34;UBERON:0002020!5.07e-08!34;UBERON:0003528!5.07e-08!34;UBERON:0001049!9.71e-08!57;UBERON:0005068!9.71e-08!57;UBERON:0006241!9.71e-08!57;UBERON:0007135!9.71e-08!57;UBERON:0002791!2.10e-07!33;UBERON:0002616!3.01e-07!59;UBERON:0002780!7.28e-07!41;UBERON:0001890!7.28e-07!41;UBERON:0006240!7.28e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.73e-29;1!UBERON:0001785;2.73e-29;1!UBERON:0002464;2.73e-29;1!UBERON:0004904;2.73e-29;1!UBERON:0001021;2.73e-29;1!UBERON:0003714;2.21e-15;2!UBERON:0005162;2.21e-15;2!UBERON:0000122;2.21e-15;2!UBERON:0000473;2.65e-15;8!UBERON:0003135;2.07e-11;11!UBERON:0000945;5.38e-07;5!UBERON:0010039;5.38e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.78e-29,1;UBERON:0001785,1.78e-29,1;UBERON:0002464,1.78e-29,1;UBERON:0004904,1.78e-29,1;UBERON:0001021,1.78e-29,1;UBERON:0003902,1.78e-29,1;UBERON:0005425,1.78e-29,1;UBERON:0003714,1.78e-15,2;UBERON:0005162,1.78e-15,2;UBERON:0000122,1.78e-15,2;UBERON:0000473,2.65e-15,8;UBERON:0003135,2.07e-11,11;UBERON:0001781,2.11e-08,4 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.376627918784408,0,0,0,0,0,0,0,0.30120591877825,0,0.0774672005803016,0,0,0,0,0,0,0.32389366601898,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0.32145117339416,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.0478326039817,0,0,0,0.348259474598534,0,0,0,0.371457501329565,0.39752481473341,0,0,0,0,0,0,0,0.71153252537342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.397227542439656,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0.506328996723799,0,0.252433774244115,0,0,0,0,0.169560592310488,0.386521706326594,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0.264145302039678,0.414656231081544,0.144119953416961,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0.206768026122887,0,0,0.303127571446259,0,0,0.496215615637554,0,0.561320188866147,0.128139149255701,0,0.160853921143607,0,0,0,0.0821271560138091,0.519254429183621,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.382838137483752,0,0,0,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0,0,0.144269212976445,0.142283686696828,0,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0.422250816255987,0.19924798825107,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0.216388639742091,0,0.0884575645033392,0,0,0.247127877893006,0.104421949505455,0.741412462787447,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0.379864775735272,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.387848869084652,0.26446520348538,0,0,0.213574825135389,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.221858103073705,0.310482014706917,0.138348634936231,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0.107824811396682,0,0,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0,0.252071696221718,0.207471757392654,0,1.42769420259154,0.294443155503077,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0.271878931907327,0.460409414939944,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.214429632529969,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0.196300467230486,0.243835849964539,0,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0.235676547101626,0,0,0,0.169927114687817,0,0.128915775947154,0.0999411559249289,0.178553938605658,0,0,2.19100916473955,0,0.286679166302903,0,0.271965960763659,0.436350690340377,0,0.371995018166751,0,0,0,0,0,0,0,0,0,3.10692662694782,3.7514978221865,0,0.310298987585686,0.213233981900981,0,0,0,0,0.12729431655633,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr6:170151887..170151902,+ | |||
}} |
Latest revision as of 22:19, 30 July 2015
Short description: | p@chr6:170151887..170151902, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:170151887..170151902, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.09e-10 | 3 |
branched duct epithelial cell | 1.09e-10 | 3 |
tracheal epithelial cell | 1.09e-10 | 3 |
tracheoblast | 1.09e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.78e-29 | 1 |
cranial nerve | 1.78e-29 | 1 |
nerve trunk | 1.78e-29 | 1 |
nerve connecting eye with brain | 1.78e-29 | 1 |
nerve | 1.78e-29 | 1 |
retinal neural layer | 1.78e-29 | 1 |
presumptive neural retina | 1.78e-29 | 1 |
neural tissue | 1.78e-15 | 2 |
multi cell component structure | 1.78e-15 | 2 |
neuron projection bundle | 1.78e-15 | 2 |
testis | 2.65e-15 | 8 |
male reproductive organ | 2.07e-11 | 11 |
layer of retina | 2.11e-08 | 4 |