FFCP PHASE1:Hg19::chr6:31239406..31239455,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:31239406..31239455,+ to FFCP PHASE1:Hg19::chr6:31239406..31239455,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:31239406..31239455,+ | |||
|coexpression_cluster_id=C500 | |||
|description=CAGE_peak_at_chr6:31239406..31239455,+ | |||
|id=chr6:31239406..31239455,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.69e-30!140;CL:0002087!3.68e-27!119;CL:0002057!1.75e-23!42;CL:0002031!2.03e-23!124;CL:0000766!8.63e-23!76;CL:0002009!1.14e-22!65;CL:0002194!5.87e-22!63;CL:0000576!5.87e-22!63;CL:0000040!5.87e-22!63;CL:0000559!5.87e-22!63;CL:0000860!3.99e-20!45;CL:0000557!3.70e-19!71;CL:0000037!4.59e-18!172;CL:0000566!4.59e-18!172;CL:0000988!4.87e-18!182;CL:0000839!5.15e-18!70;CL:0002032!1.15e-17!165;CL:0000837!1.15e-17!165;CL:0000763!8.18e-12!112;CL:0000049!8.18e-12!112;CL:0000134!1.31e-08!358;CL:0002320!3.06e-08!365;CL:0000048!4.76e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.76e-21;33!CL:0002057;5.76e-21;33!CL:0000473;9.84e-20;39!CL:0000234;9.84e-20;39!CL:0000576;2.94e-17;48!CL:0000766;2.15e-12;69!CL:0002087;4.04e-10;104!CL:0000738;3.65e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.47e-35,136;CL:0002087,1.90e-33,115;CL:0002009,1.16e-30,61;CL:0002194,8.08e-30,59;CL:0000576,8.08e-30,59;CL:0000040,8.08e-30,59;CL:0000559,8.08e-30,59;CL:0000473,1.89e-29,48;CL:0000234,1.89e-29,48;CL:0000766,2.28e-29,72;CL:0002031,3.41e-28,120;CL:0000860,1.83e-27,42;CL:0002057,1.83e-27,42;CL:0000557,2.87e-25,67;CL:0000839,1.23e-23,66;CL:0000037,2.16e-22,168;CL:0000988,2.87e-22,177;CL:0002032,4.44e-22,161;CL:0000837,4.44e-22,161;CL:0000763,4.26e-16,108;CL:0000049,4.26e-16,108;CL:0000134,9.82e-10,354;CL:0002320,4.25e-09,361;CL:0000048,2.67e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;7.27e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.20e-22!102;UBERON:0003061!1.20e-22!102;UBERON:0002193!1.71e-21!112;UBERON:0002371!2.13e-16!80;UBERON:0001474!3.49e-14!86;UBERON:0003081!1.03e-12!216;UBERON:0002405!1.35e-12!115;UBERON:0004765!1.02e-10!101;UBERON:0001434!1.02e-10!101;UBERON:0000178!5.72e-08!15;UBERON:0000179!5.72e-08!15;UBERON:0000463!5.72e-08!15;UBERON:0002384!9.01e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.29e-09;15!UBERON:0000179;6.29e-09;15!UBERON:0000463;6.29e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.88e-28,98;UBERON:0003061,1.88e-28,98;UBERON:0002193,6.15e-27,108;UBERON:0002371,1.54e-21,76;UBERON:0002405,1.39e-19,93;UBERON:0001474,9.88e-19,82;UBERON:0003081,8.48e-17,203;UBERON:0004765,3.23e-15,90;UBERON:0001434,3.57e-13,100;UBERON:0000926,4.49e-10,315;UBERON:0004120,4.49e-10,315;UBERON:0006603,4.49e-10,315;UBERON:0000178,3.94e-09,15;UBERON:0000179,3.94e-09,15;UBERON:0000463,3.94e-09,15;UBERON:0002384,6.83e-09,371;UBERON:0002204,7.79e-07,167 | |||
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| ||
|short_description=p@chr6:31239406..31239455,+ | |||
}} | }} |
Latest revision as of 23:50, 30 July 2015
Short description: | p@chr6:31239406..31239455, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:31239406..31239455, + |
Coexpression cluster: | C500_Neutrophils_Monocytederived_blood_CD14_Eosinophils_lung_mixed |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.47e-35 | 136 |
nongranular leukocyte | 1.90e-33 | 115 |
macrophage dendritic cell progenitor | 1.16e-30 | 61 |
monopoietic cell | 8.08e-30 | 59 |
monocyte | 8.08e-30 | 59 |
monoblast | 8.08e-30 | 59 |
promonocyte | 8.08e-30 | 59 |
defensive cell | 1.89e-29 | 48 |
phagocyte | 1.89e-29 | 48 |
myeloid leukocyte | 2.28e-29 | 72 |
hematopoietic lineage restricted progenitor cell | 3.41e-28 | 120 |
classical monocyte | 1.83e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.83e-27 | 42 |
granulocyte monocyte progenitor cell | 2.87e-25 | 67 |
myeloid lineage restricted progenitor cell | 1.23e-23 | 66 |
hematopoietic stem cell | 2.16e-22 | 168 |
hematopoietic cell | 2.87e-22 | 177 |
hematopoietic oligopotent progenitor cell | 4.44e-22 | 161 |
hematopoietic multipotent progenitor cell | 4.44e-22 | 161 |
myeloid cell | 4.26e-16 | 108 |
common myeloid progenitor | 4.26e-16 | 108 |
mesenchymal cell | 9.82e-10 | 354 |
connective tissue cell | 4.25e-09 | 361 |
multi fate stem cell | 2.67e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.88e-28 | 98 |
blood island | 1.88e-28 | 98 |
hemolymphoid system | 6.15e-27 | 108 |
bone marrow | 1.54e-21 | 76 |
immune system | 1.39e-19 | 93 |
bone element | 9.88e-19 | 82 |
lateral plate mesoderm | 8.48e-17 | 203 |
skeletal element | 3.23e-15 | 90 |
skeletal system | 3.57e-13 | 100 |
mesoderm | 4.49e-10 | 315 |
mesoderm-derived structure | 4.49e-10 | 315 |
presumptive mesoderm | 4.49e-10 | 315 |
blood | 3.94e-09 | 15 |
haemolymphatic fluid | 3.94e-09 | 15 |
organism substance | 3.94e-09 | 15 |
connective tissue | 6.83e-09 | 371 |
musculoskeletal system | 7.79e-07 | 167 |