FFCP PHASE1:Hg19::chr6:36652080..36652094,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-34bp_to_BC037414_5end | |||
|cluster_id=chr6:36652080..36652094,+ | |||
|coexpression_cluster_id=C672 | |||
|description=CAGE_peak_1_at_BC037414_5end | |||
|id=chr6:36652080..36652094,+ | |||
|ontology_enrichment_celltype=CL:0002371!8.86e-23!591;CL:0000144!1.47e-21!625;CL:0000548!1.30e-19!679;CL:0000004!1.30e-19!679;CL:0000255!1.30e-19!679;CL:0000012!3.12e-19!682;CL:0000003!3.17e-14!722;CL:0002057!1.45e-13!42;CL:0000860!2.36e-12!45;CL:0000723!4.26e-11!436;CL:0000048!5.87e-11!430;CL:0000063!1.26e-10!578;CL:0000034!2.51e-10!444;CL:0000192!1.62e-09!42;CL:0000514!1.62e-09!42;CL:0002009!4.02e-09!65;CL:0002194!1.15e-08!63;CL:0000576!1.15e-08!63;CL:0000040!1.15e-08!63;CL:0000559!1.15e-08!63;CL:0000557!1.34e-08!71;CL:0000055!1.55e-08!180;CL:0000359!1.77e-08!32;CL:0000839!4.49e-08!70;CL:0000183!1.08e-07!59;CL:0000680!1.32e-07!57;CL:0000056!1.32e-07!57;CL:0000355!1.32e-07!57;CL:0000187!1.54e-07!54;CL:0000220!2.90e-07!246;CL:0002321!4.90e-07!248;CL:0000393!9.59e-07!60;CL:0000211!9.59e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.40e-24;33!CL:0002057;3.40e-24;33!CL:0000473;9.48e-18;39!CL:0000234;9.48e-18;39!CL:0000576;1.15e-10;48!CL:0000359;5.58e-08;32!CL:0002539;3.22e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.28e-20,42;CL:0002057,1.28e-20,42;CL:0000473,9.05e-19,48;CL:0000234,9.05e-19,48;CL:0000048,5.71e-16,427;CL:0000723,1.48e-15,433;CL:0002009,1.49e-15,61;CL:0002194,1.86e-15,59;CL:0000576,1.86e-15,59;CL:0000040,1.86e-15,59;CL:0000559,1.86e-15,59;CL:0000034,1.76e-14,441;CL:0000557,1.11e-13,67;CL:0000839,3.75e-13,66;CL:0000766,9.10e-12,72;CL:0002320,2.22e-11,361;CL:0000134,1.23e-10,354;CL:0000219,3.49e-08,386;CL:0000359,3.54e-08,32;CL:0000192,4.15e-08,43;CL:0000514,4.15e-08,43;CL:0002539,1.77e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.72e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.78e-15!167;UBERON:0003081!1.59e-12!216;UBERON:0000926!4.42e-11!448;UBERON:0004120!4.42e-11!448;UBERON:0006603!4.42e-11!448;UBERON:0001637!7.12e-09!42;UBERON:0003509!7.12e-09!42;UBERON:0004572!7.12e-09!42;UBERON:0004872!1.25e-08!84;UBERON:0001981!1.41e-08!60;UBERON:0007500!1.41e-08!60;UBERON:0004537!1.41e-08!60;UBERON:0006965!1.41e-08!60;UBERON:0004765!3.24e-08!101;UBERON:0001434!3.24e-08!101;UBERON:0002371!3.83e-08!80;UBERON:0000055!5.30e-08!69;UBERON:0004573!2.46e-07!33;UBERON:0004571!2.46e-07!33;UBERON:0001474!2.50e-07!86;UBERON:0000486!3.05e-07!82;UBERON:0000914!3.60e-07!83;UBERON:0002329!3.60e-07!83;UBERON:0003077!3.60e-07!83;UBERON:0003059!3.60e-07!83;UBERON:0007282!3.60e-07!83;UBERON:0009618!3.60e-07!83;UBERON:0007285!3.60e-07!83;UBERON:0002049!3.87e-07!79;UBERON:0007798!3.87e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;3.22e-07;10!UBERON:0004695;3.22e-07;10!UBERON:0002111;3.22e-07;10!UBERON:0004178;3.22e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,3.58e-17,315;UBERON:0004120,3.58e-17,315;UBERON:0006603,3.58e-17,315;UBERON:0002204,3.63e-16,167;UBERON:0003081,2.34e-15,203;UBERON:0002371,1.77e-13,76;UBERON:0001474,2.32e-12,82;UBERON:0004765,5.53e-12,90;UBERON:0001434,2.04e-11,100;UBERON:0002384,1.32e-10,371;UBERON:0002405,8.42e-10,93;UBERON:0001637,2.44e-09,42;UBERON:0003509,2.44e-09,42;UBERON:0004572,2.44e-09,42;UBERON:0002390,1.43e-08,98;UBERON:0003061,1.43e-08,98;UBERON:0007500,8.80e-08,59;UBERON:0001981,8.80e-08,59;UBERON:0004537,8.80e-08,59;UBERON:0006965,8.80e-08,59;UBERON:0002193,1.28e-07,108;UBERON:0004573,1.40e-07,33;UBERON:0004571,1.40e-07,33;UBERON:0004872,1.48e-07,83;UBERON:0004237,1.77e-07,10;UBERON:0004695,1.77e-07,10;UBERON:0002111,1.77e-07,10;UBERON:0004178,1.77e-07,10;UBERON:0000055,9.86e-07,68 | |||
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| |||
|short_description=p1@BC037414 | |||
}} |
Latest revision as of 01:10, 31 July 2015
Short description: | p1@BC037414 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC037414_5end |
Coexpression cluster: | C672_CD14_Smooth_Mesenchymal_Placental_Fibroblast_mesenchymal_Alveolar |
Association with transcript: | -34bp_to_BC037414_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.28e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.28e-20 | 42 |
defensive cell | 9.05e-19 | 48 |
phagocyte | 9.05e-19 | 48 |
multi fate stem cell | 5.71e-16 | 427 |
somatic stem cell | 1.48e-15 | 433 |
macrophage dendritic cell progenitor | 1.49e-15 | 61 |
monopoietic cell | 1.86e-15 | 59 |
monocyte | 1.86e-15 | 59 |
monoblast | 1.86e-15 | 59 |
promonocyte | 1.86e-15 | 59 |
stem cell | 1.76e-14 | 441 |
granulocyte monocyte progenitor cell | 1.11e-13 | 67 |
myeloid lineage restricted progenitor cell | 3.75e-13 | 66 |
myeloid leukocyte | 9.10e-12 | 72 |
connective tissue cell | 2.22e-11 | 361 |
mesenchymal cell | 1.23e-10 | 354 |
motile cell | 3.49e-08 | 386 |
vascular associated smooth muscle cell | 3.54e-08 | 32 |
smooth muscle cell | 4.15e-08 | 43 |
smooth muscle myoblast | 4.15e-08 | 43 |
aortic smooth muscle cell | 1.77e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 3.58e-17 | 315 |
mesoderm-derived structure | 3.58e-17 | 315 |
presumptive mesoderm | 3.58e-17 | 315 |
musculoskeletal system | 3.63e-16 | 167 |
lateral plate mesoderm | 2.34e-15 | 203 |
bone marrow | 1.77e-13 | 76 |
bone element | 2.32e-12 | 82 |
skeletal element | 5.53e-12 | 90 |
skeletal system | 2.04e-11 | 100 |
connective tissue | 1.32e-10 | 371 |
immune system | 8.42e-10 | 93 |
artery | 2.44e-09 | 42 |
arterial blood vessel | 2.44e-09 | 42 |
arterial system | 2.44e-09 | 42 |
hematopoietic system | 1.43e-08 | 98 |
blood island | 1.43e-08 | 98 |
epithelial tube open at both ends | 8.80e-08 | 59 |
blood vessel | 8.80e-08 | 59 |
blood vasculature | 8.80e-08 | 59 |
vascular cord | 8.80e-08 | 59 |
hemolymphoid system | 1.28e-07 | 108 |
systemic artery | 1.40e-07 | 33 |
systemic arterial system | 1.40e-07 | 33 |
splanchnic layer of lateral plate mesoderm | 1.48e-07 | 83 |
blood vessel smooth muscle | 1.77e-07 | 10 |
arterial system smooth muscle | 1.77e-07 | 10 |
artery smooth muscle tissue | 1.77e-07 | 10 |
aorta smooth muscle tissue | 1.77e-07 | 10 |
vessel | 9.86e-07 | 68 |