FFCP PHASE1:Hg19::chr6:36652291..36652299,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=162bp_to_BC037414_5end | |||
|cluster_id=chr6:36652291..36652299,+ | |||
|coexpression_cluster_id=C672 | |||
|description=CAGE_peak_5_at_BC037414_5end | |||
|id=chr6:36652291..36652299,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.21e-22!42;CL:0000860!1.26e-21!45;CL:0002371!1.76e-15!591;CL:0000144!2.56e-15!625;CL:0002194!1.00e-13!63;CL:0000576!1.00e-13!63;CL:0000040!1.00e-13!63;CL:0000559!1.00e-13!63;CL:0002009!1.17e-13!65;CL:0000548!2.31e-13!679;CL:0000004!2.31e-13!679;CL:0000255!2.31e-13!679;CL:0000012!6.24e-13!682;CL:0000557!2.80e-12!71;CL:0000839!6.74e-12!70;CL:0000766!1.84e-10!76;CL:0000063!2.75e-09!578;CL:0000003!5.45e-08!722;CL:0000048!6.80e-08!430;CL:0000723!1.13e-07!436;CL:0000034!8.47e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.86e-48;33!CL:0002057;2.86e-48;33!CL:0000473;6.08e-33;39!CL:0000234;6.08e-33;39!CL:0000576;2.99e-21;48!CL:0000766;2.62e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.56e-41,42;CL:0002057,4.56e-41,42;CL:0000473,4.84e-35,48;CL:0000234,4.84e-35,48;CL:0002194,6.46e-29,59;CL:0000576,6.46e-29,59;CL:0000040,6.46e-29,59;CL:0000559,6.46e-29,59;CL:0002009,9.49e-28,61;CL:0000839,3.88e-25,66;CL:0000557,1.16e-24,67;CL:0000766,1.76e-22,72;CL:0000763,9.04e-13,108;CL:0000049,9.04e-13,108;CL:0002087,1.34e-11,115;CL:0002031,7.53e-11,120;CL:0000738,7.76e-09,136;CL:0000048,4.87e-07,427;CL:0000723,8.80e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;6.21e-29;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.24e-13!167;UBERON:0002371!1.76e-11!80;UBERON:0001474!2.48e-10!86;UBERON:0004765!4.68e-10!101;UBERON:0001434!4.68e-10!101;UBERON:0003081!6.58e-10!216;UBERON:0000926!1.02e-07!448;UBERON:0004120!1.02e-07!448;UBERON:0006603!1.02e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.61e-24,76;UBERON:0001474,4.23e-24,82;UBERON:0004765,2.74e-21,90;UBERON:0002405,2.72e-20,93;UBERON:0001434,6.22e-20,100;UBERON:0002390,2.16e-17,98;UBERON:0003061,2.16e-17,98;UBERON:0002204,6.32e-17,167;UBERON:0002193,1.94e-16,108;UBERON:0003081,4.43e-15,203;UBERON:0000926,1.46e-11,315;UBERON:0004120,1.46e-11,315;UBERON:0006603,1.46e-11,315 | |||
|phase1_expression=0.363356758541113,1.07050261945492,0.281908808191942,0,0.893922188854576,0,0,0,0.522371256399677,0.245733936501509,1.39560233594486,0,0.263766978228454,0.247532705920093,0.331397375727916,0,2.41077811209591,2.92124036154949,0.975865597581014,0,0,0,0,0.136874425072884,0.251085279189606,0,0.164201178899891,0,0,0,0.619264493264304,0.919421224478927,0.30120591877825,0.739508020333575,0,0,0,0,0.401088894940283,0.651032612147555,0,0,0,0.145398238779565,1.13362783106643,0.970336244751265,0.464858073811369,0.822335776043652,2.47765096716083,4.60307827715441,3.33008918487831,4.25668013799453,1.72372840368309,1.93645405075148,1.35426486594342,0.376484679085209,1.63743690034707,2.47195832889593,3.06083892370903,1.28371610830437,4.47535988059329,1.9791078011203,3.19141852194611,2.13112375266347,1.7412554317715,2.8369261234557,1.24564449799115,3.51748131359441,5.21482918420201,5.64690996233303,1.81619850790011,2.57794345191295,1.58231193720442,0,0.637812899895131,0.209658645508376,0.22465726229299,0.300353785683013,0.48217676009124,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0.361439152384566,0,0.434539556882471,0,0,0,0.221729397462564,0.175669571386252,0,0.364295288292542,1.48313777113772,0.649094787309367,0.348259474598534,1.32957960518865,0,0,0.371457501329565,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0.760272105718513,0,0,1.62028389576352,0,0,0,0,0,0.366403487860815,0,0,0,1.98788780678127,0.506522046658319,0,0.286836620748814,1.41867352879343,0,0,1.48000529050296,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0,0.469737994575059,0,0.140450806702248,0,0.245668634623536,0,0,0.741800787835671,0,1.43723628363248,0,0,0,0,0.30648779579902,0.45071417671979,0.113432183160021,0,0.213557388818567,0,0,0.412210116953756,0.515281080091258,0.18611685633159,0,0.0974370051611986,0,0.184099797284599,0.323292113637624,0.355009592516614,0.503760491138201,0,0.386521706326594,0.545492241181669,0.286804595389004,0,0,0,0,0,0,1.56449532329816,2.57296375277154,0,0.464367928031979,2.16563844500876,0,0,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0.201057944823262,0.0925884451585296,0,1.03993478527958,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0.268675568108545,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0.144119953416961,0,0.126995788584338,0.381988425558278,0,0,0.205654985406647,0,0.857479297891735,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,1.07057393278297,0.788512075169673,0.234282829985426,0.601892199455438,0,1.03473071292505,0,0,0.260650843404249,0,0.686286847621712,0,0,0.320182673410333,0.303127571446259,1.66435439510497,0.30239029332968,0.496215615637554,0.306923946576125,1.68396056659844,0.512556597022804,1.53512174720011,0.965123526861645,0,0,0.532685175939381,0.0821271560138091,0,0.464841513839837,0,0.40101294060657,1.10497186723076,0,0,0.524497659837696,0.451199612907412,0,0,0,0.211103257785751,0,0.340187410553031,0.215915916102139,0,0,0.501689773854853,0,1.66215201785745,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,0,0,1.6068392984416,0.193341436584244,0.154048617114644,0,0,0.107420244868274,0.725083469571143,0.170453254832202,0.267096106940212,0.165284915360978,0.768760269460425,0,0.30347334256665,1.39453664789186,0.31481234683064,0,0,0,0,0.18532421910392,0.858749320451947,0,0,0.762520775695299,0,0.42793898803392,0,0.78494864019923,0,1.92175920815238,0.824686816419805,0,0,0.421258456238981,0,0,2.11300293513511,0,0.989838023675989,0,0,0.66343897524122,1.31535265576129,0.578775534266688,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0.196498082026242,0,0.354761064070598,1.47775344708365,0.658589785919804,0.379473173765715,0,0.288666338176536,0,0,0.0941438007767792,0.86101074534246,3.36942951335251,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0.111443384277478,0,0.23874448473769,0.593929361665277,0,0,0,0,0.659215496907038,0,0.796991953004279,0,0,0,0,1.24415835064723,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0.31396051279005,0,0,0,0,0,0,0.843992258112108,0,0,0,0.995261931078505,0,0.611030144933625,0,0.247127877893006,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0.137041924646751,0,0,0,0,0.426905989478705,0,0.144090417154106,0,0,0,0.124252535565433,0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| |||
|short_description=p5@BC037414 | |||
}} |
Latest revision as of 01:10, 31 July 2015
Short description: | p5@BC037414 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BC037414_5end |
Coexpression cluster: | C672_CD14_Smooth_Mesenchymal_Placental_Fibroblast_mesenchymal_Alveolar |
Association with transcript: | 162bp_to_BC037414_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.56e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.56e-41 | 42 |
defensive cell | 4.84e-35 | 48 |
phagocyte | 4.84e-35 | 48 |
monopoietic cell | 6.46e-29 | 59 |
monocyte | 6.46e-29 | 59 |
monoblast | 6.46e-29 | 59 |
promonocyte | 6.46e-29 | 59 |
macrophage dendritic cell progenitor | 9.49e-28 | 61 |
myeloid lineage restricted progenitor cell | 3.88e-25 | 66 |
granulocyte monocyte progenitor cell | 1.16e-24 | 67 |
myeloid leukocyte | 1.76e-22 | 72 |
myeloid cell | 9.04e-13 | 108 |
common myeloid progenitor | 9.04e-13 | 108 |
nongranular leukocyte | 1.34e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 7.53e-11 | 120 |
leukocyte | 7.76e-09 | 136 |
multi fate stem cell | 4.87e-07 | 427 |
somatic stem cell | 8.80e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.61e-24 | 76 |
bone element | 4.23e-24 | 82 |
skeletal element | 2.74e-21 | 90 |
immune system | 2.72e-20 | 93 |
skeletal system | 6.22e-20 | 100 |
hematopoietic system | 2.16e-17 | 98 |
blood island | 2.16e-17 | 98 |
musculoskeletal system | 6.32e-17 | 167 |
hemolymphoid system | 1.94e-16 | 108 |
lateral plate mesoderm | 4.43e-15 | 203 |
mesoderm | 1.46e-11 | 315 |
mesoderm-derived structure | 1.46e-11 | 315 |
presumptive mesoderm | 1.46e-11 | 315 |