FFCP PHASE1:Hg19::chr6:56456776..56456780,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:56456776..56456780,- | |||
|description=CAGE_peak_at_chr6:56456776..56456780,- | |description=CAGE_peak_at_chr6:56456776..56456780,- | ||
|id=chr6:56456776..56456780,- | |id=chr6:56456776..56456780,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!4.06e-11!143;DOID:305!2.99e-10!106 | |ontology_enrichment_disease=DOID:0050687!4.06e-11!143;DOID:305!2.99e-10!106 | ||
|ontology_enrichment_disease_v019=DOID:6193;7.74e-12;1!DOID:3908;2.46e-09;5!DOID:3307;8.92e-07;2 | |ontology_enrichment_disease_v019=DOID:6193;7.74e-12;1!DOID:3908;2.46e-09;5!DOID:3307;8.92e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:6193,1.47e-11,1;DOID:3908,2.17e-09,5;DOID:3307,8.93e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000955!4.88e-11!69;UBERON:0006238!4.88e-11!69;UBERON:0001049!1.41e-09!57;UBERON:0005068!1.41e-09!57;UBERON:0006241!1.41e-09!57;UBERON:0007135!1.41e-09!57;UBERON:0002616!1.45e-09!59;UBERON:0001017!3.81e-09!82;UBERON:0000033!3.95e-09!123;UBERON:0000153!8.84e-09!129;UBERON:0007811!8.84e-09!129;UBERON:0005743!1.30e-08!86;UBERON:0002780!1.97e-08!41;UBERON:0001890!1.97e-08!41;UBERON:0006240!1.97e-08!41;UBERON:0000073!3.67e-08!94;UBERON:0001016!3.67e-08!94;UBERON:0003080!4.86e-08!42;UBERON:0002020!7.43e-08!34;UBERON:0003528!7.43e-08!34;UBERON:0000475!1.35e-07!365;UBERON:0001893!2.94e-07!34;UBERON:0003075!4.50e-07!86;UBERON:0007284!4.50e-07!86;UBERON:0002791!6.63e-07!33;UBERON:0002346!9.47e-07!90 | |ontology_enrichment_uberon=UBERON:0000955!4.88e-11!69;UBERON:0006238!4.88e-11!69;UBERON:0001049!1.41e-09!57;UBERON:0005068!1.41e-09!57;UBERON:0006241!1.41e-09!57;UBERON:0007135!1.41e-09!57;UBERON:0002616!1.45e-09!59;UBERON:0001017!3.81e-09!82;UBERON:0000033!3.95e-09!123;UBERON:0000153!8.84e-09!129;UBERON:0007811!8.84e-09!129;UBERON:0005743!1.30e-08!86;UBERON:0002780!1.97e-08!41;UBERON:0001890!1.97e-08!41;UBERON:0006240!1.97e-08!41;UBERON:0000073!3.67e-08!94;UBERON:0001016!3.67e-08!94;UBERON:0003080!4.86e-08!42;UBERON:0002020!7.43e-08!34;UBERON:0003528!7.43e-08!34;UBERON:0000475!1.35e-07!365;UBERON:0001893!2.94e-07!34;UBERON:0003075!4.50e-07!86;UBERON:0007284!4.50e-07!86;UBERON:0002791!6.63e-07!33;UBERON:0002346!9.47e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0002784;3.91e-24;4!UBERON:0001905;6.65e-22;2!UBERON:0002757;6.65e-22;2!UBERON:0010134;6.65e-22;2!UBERON:0005408;6.65e-22;2!UBERON:0001899;6.65e-22;2!UBERON:0001894;4.53e-14;7!UBERON:0002038;7.74e-12;1!UBERON:0009661;7.74e-12;1!UBERON:0002950;7.74e-12;1!UBERON:0001891;7.74e-12;1!UBERON:0003296;1.91e-11;4!UBERON:0010133;1.91e-11;4!UBERON:0009663;6.57e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0002784;3.91e-24;4!UBERON:0001905;6.65e-22;2!UBERON:0002757;6.65e-22;2!UBERON:0010134;6.65e-22;2!UBERON:0005408;6.65e-22;2!UBERON:0001899;6.65e-22;2!UBERON:0001894;4.53e-14;7!UBERON:0002038;7.74e-12;1!UBERON:0009661;7.74e-12;1!UBERON:0002950;7.74e-12;1!UBERON:0001891;7.74e-12;1!UBERON:0003296;1.91e-11;4!UBERON:0010133;1.91e-11;4!UBERON:0009663;6.57e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002784,1.51e-24,4;UBERON:0001905,3.93e-22,2;UBERON:0002757,3.93e-22,2;UBERON:0010134,3.93e-22,2;UBERON:0005408,3.93e-22,2;UBERON:0001899,3.93e-22,2;UBERON:0001894,2.65e-14,7;UBERON:0006222,2.65e-14,7;UBERON:0003296,1.47e-11,4;UBERON:0010133,1.47e-11,4;UBERON:0002038,1.81e-11,1;UBERON:0009661,1.81e-11,1;UBERON:0002950,1.81e-11,1;UBERON:0001891,1.81e-11,1;UBERON:0009616,1.81e-11,1;UBERON:0010286,1.81e-11,1;UBERON:0009663,8.10e-07,7 | |||
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| ||
|short_description=p@chr6:56456776..56456780,- | |short_description=p@chr6:56456776..56456780,- | ||
}} | }} |
Latest revision as of 02:29, 31 July 2015
Short description: | p@chr6:56456776..56456780, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:56456776..56456780, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of diencephalon | 1.51e-24 | 4 |
pineal body | 3.93e-22 | 2 |
regional part of epithalamus | 3.93e-22 | 2 |
secretory circumventricular organ | 3.93e-22 | 2 |
circumventricular organ | 3.93e-22 | 2 |
epithalamus | 3.93e-22 | 2 |
diencephalon | 2.65e-14 | 7 |
future diencephalon | 2.65e-14 | 7 |
gland of diencephalon | 1.47e-11 | 4 |
neuroendocrine gland | 1.47e-11 | 4 |
substantia nigra | 1.81e-11 | 1 |
midbrain nucleus | 1.81e-11 | 1 |
regional part of midbrain | 1.81e-11 | 1 |
midbrain | 1.81e-11 | 1 |
presumptive midbrain | 1.81e-11 | 1 |
midbrain neural tube | 1.81e-11 | 1 |
telencephalic nucleus | 8.10e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.47e-11 | 1 |
non-small cell lung carcinoma | 2.17e-09 | 5 |
teratoma | 8.93e-07 | 2 |