FFCP PHASE1:Hg19::chr7:100141221..100141230,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:100141221..100141230,- | |||
|description=CAGE_peak_at_chr7:100141221..100141230,- | |description=CAGE_peak_at_chr7:100141221..100141230,- | ||
|id=chr7:100141221..100141230,- | |id=chr7:100141221..100141230,- | ||
|ontology_enrichment_celltype=CL:0000542!4.55e-09!53;CL:0000051!4.55e-09!53;CL:0000838!3.20e-08!52;CL:0000945!1.26e-07!24;CL:0000826!1.26e-07!24 | |ontology_enrichment_celltype=CL:0000542!4.55e-09!53;CL:0000051!4.55e-09!53;CL:0000838!3.20e-08!52;CL:0000945!1.26e-07!24;CL:0000826!1.26e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000946;1.30e-19;1!CL:0000786;1.30e-19;1!CL:0002127;3.25e-19;1!CL:0000911;3.25e-19;1!CL:0000814;3.25e-19;1!CL:0002593;2.72e-10;2!CL:0002202;6.35e-09;9!CL:0002632;6.35e-09;9!CL:0000322;2.79e-07;3!CL:0000307;2.79e-07;3 | |ontology_enrichment_celltype_v019=CL:0000946;1.30e-19;1!CL:0000786;1.30e-19;1!CL:0002127;3.25e-19;1!CL:0000911;3.25e-19;1!CL:0000814;3.25e-19;1!CL:0002593;2.72e-10;2!CL:0002202;6.35e-09;9!CL:0002632;6.35e-09;9!CL:0000322;2.79e-07;3!CL:0000307;2.79e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000946,1.08e-19,1;CL:0000786,1.08e-19,1;CL:0000980,1.08e-19,1;CL:0002127,3.25e-19,1;CL:0000914,3.25e-19,1;CL:0000911,3.25e-19,1;CL:0000814,3.25e-19,1;CL:0002042,3.25e-19,1;CL:0002039,3.25e-19,1;CL:0002040,3.25e-19,1;CL:0002041,3.25e-19,1;CL:0000785,1.57e-10,2;CL:0000955,1.57e-10,2;CL:0000818,1.57e-10,2;CL:0000954,1.57e-10,2;CL:0000816,1.57e-10,2;CL:0000893,2.72e-10,2;CL:0002489,2.72e-10,2;CL:0000809,2.72e-10,2;CL:0000808,2.72e-10,2;CL:0000894,2.72e-10,2;CL:0000806,2.72e-10,2;CL:0000807,2.72e-10,2;CL:0000805,2.72e-10,2;CL:0002425,2.72e-10,2;CL:0002593,3.58e-10,2;CL:0002202,6.61e-09,9;CL:0002632,6.61e-09,9;CL:0000817,1.93e-07,3;CL:0000322,2.63e-07,3;CL:0000068,3.16e-07,3;CL:0000069,3.16e-07,3;CL:0000307,3.16e-07,3;CL:0000377,3.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000954;1.72e-10;2!CL:0002425;2.72e-10;2!UBERON:0008814;2.72e-10;2!UBERON:0010056;2.72e-10;2!CL:0000377;2.79e-07;3 | |ontology_enrichment_development_v019=CL:0000954;1.72e-10;2!CL:0002425;2.72e-10;2!UBERON:0008814;2.72e-10;2!UBERON:0010056;2.72e-10;2!CL:0000377;2.79e-07;3 | ||
|ontology_enrichment_disease=DOID:14566!9.89e-17!239;DOID:162!9.12e-16!235;DOID:0050686!1.08e-10!137;DOID:0060058!1.36e-10!10;DOID:1749!1.51e-09!14;DOID:2531!2.39e-08!51;DOID:0060083!2.39e-08!51;DOID:0050687!2.43e-08!143;DOID:305!6.98e-08!106 | |ontology_enrichment_disease=DOID:14566!9.89e-17!239;DOID:162!9.12e-16!235;DOID:0050686!1.08e-10!137;DOID:0060058!1.36e-10!10;DOID:1749!1.51e-09!14;DOID:2531!2.39e-08!51;DOID:0060083!2.39e-08!51;DOID:0050687!2.43e-08!143;DOID:305!6.98e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:4074;1.72e-10;2!DOID:4905;1.72e-10;2!DOID:3498;1.72e-10;2!DOID:3910;2.72e-10;2 | |ontology_enrichment_disease_v019=DOID:4074;1.72e-10;2!DOID:4905;1.72e-10;2!DOID:3498;1.72e-10;2!DOID:3910;2.72e-10;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4074,1.72e-10,2;DOID:4905,1.72e-10,2;DOID:3498,1.72e-10,2;DOID:3910,2.49e-10,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.72e-10;2!UBERON:0002456;2.72e-10;2!UBERON:0002173;2.72e-10;2!UBERON:0002186;2.72e-10;2!UBERON:0002106;2.79e-07;3!UBERON:0001723;2.79e-07;3!UBERON:0004821;2.79e-07;3!UBERON:0007499;2.79e-07;3!UBERON:0003215;2.79e-07;3!UBERON:0010368;2.79e-07;3!UBERON:0009911;2.79e-07;3!UBERON:0002299;2.79e-07;3!UBERON:0001033;2.79e-07;3!UBERON:0006524;2.79e-07;3!UBERON:0008874;2.79e-07;3!UBERON:0002169;2.79e-07;3!UBERON:0004894;2.79e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0004903;2.72e-10;2!UBERON:0002456;2.72e-10;2!UBERON:0002173;2.72e-10;2!UBERON:0002186;2.72e-10;2!UBERON:0002106;2.79e-07;3!UBERON:0001723;2.79e-07;3!UBERON:0004821;2.79e-07;3!UBERON:0007499;2.79e-07;3!UBERON:0003215;2.79e-07;3!UBERON:0010368;2.79e-07;3!UBERON:0009911;2.79e-07;3!UBERON:0002299;2.79e-07;3!UBERON:0001033;2.79e-07;3!UBERON:0006524;2.79e-07;3!UBERON:0008874;2.79e-07;3!UBERON:0002169;2.79e-07;3!UBERON:0004894;2.79e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.48e-11,7;UBERON:0005057,3.48e-11,7;UBERON:0004903,2.49e-10,2;UBERON:0002173,2.49e-10,2;UBERON:0002186,2.49e-10,2;UBERON:0002456,3.58e-10,2;UBERON:0000974,3.63e-08,10;UBERON:0001042,3.63e-08,10;UBERON:0009145,3.63e-08,10;UBERON:0006562,1.67e-07,11;UBERON:0001723,2.32e-07,3;UBERON:0001033,2.32e-07,3;UBERON:0010056,2.32e-07,3;UBERON:0004821,2.63e-07,3;UBERON:0003215,2.63e-07,3;UBERON:0010368,2.63e-07,3;UBERON:0009911,2.63e-07,3;UBERON:0002299,2.63e-07,3;UBERON:0006524,2.63e-07,3;UBERON:0008874,2.63e-07,3;UBERON:0002169,2.63e-07,3;UBERON:0004894,2.63e-07,3;UBERON:0002106,2.97e-07,3;UBERON:0004854,2.97e-07,3;UBERON:0009034,2.97e-07,3;UBERON:0002095,2.97e-07,3;UBERON:0004782,2.97e-07,3;UBERON:0003281,2.97e-07,3;UBERON:0009664,2.97e-07,3;UBERON:0002296,2.97e-07,3;UBERON:0005602,2.97e-07,3;UBERON:0001179,2.97e-07,3;UBERON:0006293,2.97e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.328402357799783,0.0787107813136792,0,0,0,0,0,0,0,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56919201590938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.413509717453592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84566656058903,0,0.490080431962063,0.185803175125719,0,0.213425530045242,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0.121360521749513,0.111443384277478,1.70481688083848,0,0,0,0,0,0,0.329607748453519,0.422250816255987,0,0,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38966241399549,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0.110579259931225,0.295547618953547,0,0.10893846351899,0,0,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0.948768663620925,0,0.421996129056054,0,0.141353071433941,0,0,0,0,0.889563386041866,0,0,0,0,0,0,0,2.42780379534093,0,0,0,0,0.150323419414493,0.207376382794494,0,0,0,0,0.284609546029793,0,0.173559738335131,0,0.609414446062818,0,0.687944129886466,0,0,0,0,0,0,0.274083849293502,0.19871461170299,0,0,0,0,0,0.432271251462318,0.80175617316141,0,0,0,0,0,0,0,0,0,0,0,0,1.8402114799552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.931406652723629,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0.197611631897944,0.852548188666271,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0.39997479170986,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,1.96393632455575,0,0,0,0,0,0,0,0.327543835020193,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88084968889448,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19929387109915,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.244209805832924,0,0,0.449126010532934,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.328402357799783,0.0787107813136792,0,0,0,0,0,0,0,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56919201590938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.413509717453592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84566656058903,0,0.490080431962063,0.185803175125719,0,0.213425530045242,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0.121360521749513,0.111443384277478,1.70481688083848,0,0,0,0,0,0,0.329607748453519,0.422250816255987,0,0,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38966241399549,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0.110579259931225,0.295547618953547,0,0.10893846351899,0,0,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0.948768663620925,0,0.421996129056054,0,0.141353071433941,0,0,0,0,0.889563386041866,0,0,0,0,0,0,0,2.42780379534093,0,0,0,0,0.150323419414493,0.207376382794494,0,0,0,0,0.284609546029793,0,0.173559738335131,0,0.609414446062818,0,0.687944129886466,0,0,0,0,0,0,0.274083849293502,0.19871461170299,0,0,0,0,0,0.432271251462318,0.80175617316141,0,0,0,0,0,0,0,0,0,0,0,0,1.8402114799552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.931406652723629,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0.197611631897944,0.852548188666271,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0.39997479170986,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,1.96393632455575,0,0,0,0,0,0,0,0.327543835020193,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88084968889448,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19929387109915,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.244209805832924,0,0,0.449126010532934,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr7:100141221..100141230,- | |short_description=p@chr7:100141221..100141230,- | ||
}} | }} |
Latest revision as of 04:02, 31 July 2015
Short description: | p@chr7:100141221..100141230, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:100141221..100141230, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 3.48e-11 | 7 |
immune organ | 3.48e-11 | 7 |
bronchoalveolar duct junction | 2.49e-10 | 2 |
alveolar duct | 2.49e-10 | 2 |
bronchiole | 2.49e-10 | 2 |
internal thoracic artery | 3.58e-10 | 2 |
neck | 3.63e-08 | 10 |
chordate pharynx | 3.63e-08 | 10 |
pharyngeal region of foregut | 3.63e-08 | 10 |
pharynx | 1.67e-07 | 11 |
tongue | 2.32e-07 | 3 |
gustatory system | 2.32e-07 | 3 |
future tongue | 2.32e-07 | 3 |
pulmonary alveolus epithelium | 2.63e-07 | 3 |
alveolus | 2.63e-07 | 3 |
pulmonary lobule | 2.63e-07 | 3 |
lobule | 2.63e-07 | 3 |
alveolus of lung | 2.63e-07 | 3 |
alveolar system | 2.63e-07 | 3 |
pulmonary acinus | 2.63e-07 | 3 |
alveolar sac | 2.63e-07 | 3 |
alveolar wall | 2.63e-07 | 3 |
spleen | 2.97e-07 | 3 |
gastrointestinal system mesentery | 2.97e-07 | 3 |
stomach region | 2.97e-07 | 3 |
mesentery | 2.97e-07 | 3 |
gastrointestinal system serosa | 2.97e-07 | 3 |
mesentery of stomach | 2.97e-07 | 3 |
gut mesentery | 2.97e-07 | 3 |
dorsal mesentery | 2.97e-07 | 3 |
dorsal mesogastrium | 2.97e-07 | 3 |
peritoneal cavity | 2.97e-07 | 3 |
spleen primordium | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 1.72e-10 | 2 |
pancreatic carcinoma | 1.72e-10 | 2 |
pancreatic ductal adenocarcinoma | 1.72e-10 | 2 |
lung adenocarcinoma | 2.49e-10 | 2 |