FFCP PHASE1:Hg19::chr7:119353807..119353812,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:119353807..119353812,- | |||
|coexpression_cluster_id=C510 | |||
|description=CAGE_peak_at_chr7:119353807..119353812,- | |description=CAGE_peak_at_chr7:119353807..119353812,- | ||
|id=chr7:119353807..119353812,- | |id=chr7:119353807..119353812,- | ||
|ontology_enrichment_celltype=CL:0000054!1.82e-11!2;CL:0000137!1.82e-11!2;CL:0000092!1.82e-11!2;CL:0000594!7.76e-08!3 | |ontology_enrichment_celltype=CL:0000054!1.82e-11!2;CL:0000137!1.82e-11!2;CL:0000092!1.82e-11!2;CL:0000594!7.76e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000054;3.61e-34;2!CL:0000137;3.61e-34;2!CL:0000092;3.61e-34;2!CL:0000333;1.60e-14;5!CL:0002092;5.73e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,3.61e-34,2;CL:0000137,3.61e-34,2;CL:0000092,3.61e-34,2;CL:0002092,5.73e-08,10;CL:0000062,2.32e-07,11;CL:0000375,2.32e-07,11;CL:0000335,2.32e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000335;2.32e-07;11 | |||
|ontology_enrichment_disease=DOID:154!2.46e-40!2;DOID:4236!2.46e-40!2;DOID:1192!1.22e-27!3;DOID:0060085!1.53e-21!1;DOID:3165!1.53e-21!1;DOID:0060121!1.53e-21!1;DOID:2438!1.53e-21!1;DOID:4418!1.53e-21!1;DOID:3369!2.82e-21!1;DOID:171!1.36e-18!10;DOID:200!1.82e-11!2;DOID:4305!1.82e-11!2;DOID:3193!2.02e-11!2;DOID:962!2.02e-11!2;DOID:1115!1.24e-09!20;DOID:3095!8.25e-09!22;DOID:2994!8.25e-09!22;DOID:3093!1.20e-07!11 | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.23e-66;1!DOID:3165;1.23e-66;1!DOID:0060121;1.23e-66;1!DOID:2438;1.23e-66;1!DOID:4418;1.23e-66;1!DOID:200;3.61e-34;2!DOID:4305;3.61e-34;2!DOID:3193;5.04e-34;2!DOID:962;5.04e-34;2!DOID:171;2.72e-27;10!DOID:1192;3.27e-23;3!DOID:0060072;7.35e-18;4!DOID:3095;4.26e-13;22!DOID:2994;4.26e-13;22!DOID:201;2.19e-12;6!DOID:0060100;2.19e-12;6!DOID:169;2.45e-12;6!DOID:3093;7.92e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.23e-66,1;DOID:3165,1.23e-66,1;DOID:0060121,1.23e-66,1;DOID:2438,1.23e-66,1;DOID:4418,1.23e-66,1;DOID:200,3.61e-34,2;DOID:4305,3.61e-34,2;DOID:3193,5.04e-34,2;DOID:962,5.04e-34,2;DOID:171,2.72e-27,10;DOID:1192,3.27e-23,3;DOID:0060072,7.35e-18,4;DOID:3095,4.26e-13,22;DOID:2994,4.26e-13,22;DOID:201,2.19e-12,6;DOID:0060100,2.19e-12,6;DOID:169,2.45e-12,6;DOID:3093,7.92e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0003714!2.02e-11!2;UBERON:0001723!6.34e-08!3;UBERON:0001033!6.34e-08!3;UBERON:0010056!6.34e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;5.04e-34;2!UBERON:0000014;7.35e-18;4!UBERON:0002346;1.03e-17;4!UBERON:0000923;1.03e-17;4!UBERON:0010316;1.03e-17;4!UBERON:0005291;1.03e-17;4!UBERON:0000013;1.60e-14;5!UBERON:0002410;1.60e-14;5!UBERON:0002050;1.83e-14;5!UBERON:0005423;1.83e-14;5!UBERON:0000010;1.12e-08;8!UBERON:0002371;7.48e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,5.04e-34,2;UBERON:0000014,7.35e-18,4;UBERON:0000013,1.60e-14,5;UBERON:0002410,1.60e-14,5;UBERON:0000010,1.12e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76915068087175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,1.48722917110803,2.23457967189298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76915068087175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,1.48722917110803,2.23457967189298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:119353807..119353812,- | |short_description=p@chr7:119353807..119353812,- | ||
}} | }} |
Latest revision as of 05:24, 31 July 2015
Short description: | p@chr7:119353807..119353812, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:119353807..119353812, - |
Coexpression cluster: | C510_fibrous_mesothelioma_cholangiocellular_liposarcoma_Fibroblast_mesenchymal_leukemia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 3.61e-34 | 2 |
osteocyte | 3.61e-34 | 2 |
osteoclast | 3.61e-34 | 2 |
bone marrow cell | 5.73e-08 | 10 |
osteoblast | 2.32e-07 | 11 |
osteoprogenitor cell | 2.32e-07 | 11 |
mesenchyme condensation cell | 2.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 5.04e-34 | 2 |
zone of skin | 7.35e-18 | 4 |
sympathetic nervous system | 1.60e-14 | 5 |
autonomic nervous system | 1.60e-14 | 5 |
peripheral nervous system | 1.12e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.23e-66 | 1 |
skin benign neoplasm | 1.23e-66 | 1 |
integumentary system benign neoplasm | 1.23e-66 | 1 |
dermis tumor | 1.23e-66 | 1 |
cutaneous fibrous histiocytoma | 1.23e-66 | 1 |
giant cell tumor | 3.61e-34 | 2 |
bone giant cell tumor | 3.61e-34 | 2 |
peripheral nerve sheath neoplasm | 5.04e-34 | 2 |
neurofibroma | 5.04e-34 | 2 |
neuroectodermal tumor | 2.72e-27 | 10 |
peripheral nervous system neoplasm | 3.27e-23 | 3 |
benign neoplasm | 7.35e-18 | 4 |
germ cell and embryonal cancer | 4.26e-13 | 22 |
germ cell cancer | 4.26e-13 | 22 |
connective tissue cancer | 2.19e-12 | 6 |
musculoskeletal system cancer | 2.19e-12 | 6 |
neuroendocrine tumor | 2.45e-12 | 6 |
nervous system cancer | 7.92e-07 | 11 |