FFCP PHASE1:Hg19::chr7:120381624..120381637,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:120381624..120381637,+ | |||
|coexpression_cluster_id=C42 | |coexpression_cluster_id=C42 | ||
|description=CAGE_peak_at_chr7:120381624..120381637,+ | |description=CAGE_peak_at_chr7:120381624..120381637,+ | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000167;4.61e-26;1!CL:0000164;4.61e-26;1!CL:0000502;4.61e-26;1!CL:0000172;4.61e-26;1!CL:0000173;4.61e-26;1!CL:0002553;8.64e-26;1!CL:0000082;1.99e-12;19 | |ontology_enrichment_celltype_v019=CL:0000167;4.61e-26;1!CL:0000164;4.61e-26;1!CL:0000502;4.61e-26;1!CL:0000172;4.61e-26;1!CL:0000173;4.61e-26;1!CL:0002553;8.64e-26;1!CL:0000082;1.99e-12;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000167,4.61e-26,1;CL:0000164,4.61e-26,1;CL:0000502,4.61e-26,1;CL:0000172,4.61e-26,1;CL:0000173,4.61e-26,1;CL:0002351,4.61e-26,1;CL:0002553,7.62e-26,1;CL:0000082,1.99e-12,19 | |||
|ontology_enrichment_development_v019=CL:0002351;4.61e-26;1!UBERON:0008947;2.27e-08;29!UBERON:0001041;4.12e-08;30 | |ontology_enrichment_development_v019=CL:0002351;4.61e-26;1!UBERON:0008947;2.27e-08;29!UBERON:0001041;4.12e-08;30 | ||
|ontology_enrichment_disease=DOID:5409!3.80e-12!4;DOID:0050615!8.05e-08!16;DOID:1325!4.10e-07!7;DOID:3904!4.10e-07!7 | |ontology_enrichment_disease=DOID:5409!3.80e-12!4;DOID:0050615!8.05e-08!16;DOID:1325!4.10e-07!7;DOID:3904!4.10e-07!7 | ||
|ontology_enrichment_disease_v019=DOID:0050619;3.58e-26;1!DOID:1357;3.58e-26;1!DOID:4430;4.61e-26;1!DOID:5409;9.22e-26;4!DOID:0050615;3.58e-25;16!DOID:1324;1.52e-15;15!DOID:1325;3.41e-15;7!DOID:3904;3.41e-15;7!DOID:3905;4.80e-12;9 | |ontology_enrichment_disease_v019=DOID:0050619;3.58e-26;1!DOID:1357;3.58e-26;1!DOID:4430;4.61e-26;1!DOID:5409;9.22e-26;4!DOID:0050615;3.58e-25;16!DOID:1324;1.52e-15;15!DOID:1325;3.41e-15;7!DOID:3904;3.41e-15;7!DOID:3905;4.80e-12;9 | ||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.58e-26,1;DOID:1357,3.58e-26,1;DOID:4430,4.61e-26,1;DOID:5409,9.82e-26,4;DOID:0050615,3.58e-25,16;DOID:1324,1.52e-15,15;DOID:1325,3.53e-15,7;DOID:3904,3.53e-15,7;DOID:3905,4.94e-12,9 | |||
|ontology_enrichment_uberon=UBERON:0003076!2.19e-24!15;UBERON:0003057!2.19e-24!15;UBERON:0002240!3.04e-15!3;UBERON:0006331!1.96e-14!3;UBERON:0002298!2.39e-14!8;UBERON:0000988!3.14e-14!3;UBERON:0004733!8.17e-14!12;UBERON:0002028!8.17e-14!12;UBERON:0007277!8.17e-14!12;UBERON:0002680!4.94e-13!9;UBERON:0001895!4.94e-13!9;UBERON:0010092!4.94e-13!9;UBERON:0001049!5.47e-13!57;UBERON:0005068!5.47e-13!57;UBERON:0006241!5.47e-13!57;UBERON:0007135!5.47e-13!57;UBERON:0004732!1.05e-12!13;UBERON:0001017!2.06e-12!82;UBERON:0005743!1.11e-11!86;UBERON:0000073!2.95e-10!94;UBERON:0001016!2.95e-10!94;UBERON:0002148!3.80e-10!2;UBERON:0009662!3.80e-10!2;UBERON:0005174!2.44e-09!5;UBERON:0001137!2.44e-09!5;UBERON:0003075!1.06e-07!86;UBERON:0007284!1.06e-07!86;UBERON:0002616!2.16e-07!59;UBERON:0002346!3.07e-07!90;UBERON:0000955!4.03e-07!69;UBERON:0006238!4.03e-07!69;UBERON:0000025!4.90e-07!194 | |ontology_enrichment_uberon=UBERON:0003076!2.19e-24!15;UBERON:0003057!2.19e-24!15;UBERON:0002240!3.04e-15!3;UBERON:0006331!1.96e-14!3;UBERON:0002298!2.39e-14!8;UBERON:0000988!3.14e-14!3;UBERON:0004733!8.17e-14!12;UBERON:0002028!8.17e-14!12;UBERON:0007277!8.17e-14!12;UBERON:0002680!4.94e-13!9;UBERON:0001895!4.94e-13!9;UBERON:0010092!4.94e-13!9;UBERON:0001049!5.47e-13!57;UBERON:0005068!5.47e-13!57;UBERON:0006241!5.47e-13!57;UBERON:0007135!5.47e-13!57;UBERON:0004732!1.05e-12!13;UBERON:0001017!2.06e-12!82;UBERON:0005743!1.11e-11!86;UBERON:0000073!2.95e-10!94;UBERON:0001016!2.95e-10!94;UBERON:0002148!3.80e-10!2;UBERON:0009662!3.80e-10!2;UBERON:0005174!2.44e-09!5;UBERON:0001137!2.44e-09!5;UBERON:0003075!1.06e-07!86;UBERON:0007284!1.06e-07!86;UBERON:0002616!2.16e-07!59;UBERON:0002346!3.07e-07!90;UBERON:0000955!4.03e-07!69;UBERON:0006238!4.03e-07!69;UBERON:0000025!4.90e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;3.58e-26;1!UBERON:0001825;3.58e-26;1!UBERON:0004802;1.99e-12;19!UBERON:0000115;1.99e-12;19!UBERON:0002048;7.93e-11;22!UBERON:0004807;7.93e-11;22!UBERON:0000117;7.93e-11;22!UBERON:0000171;7.93e-11;22!UBERON:0000170;7.93e-11;22!UBERON:0005181;2.51e-07;35!UBERON:0000072;4.33e-07;37 | |ontology_enrichment_uberon_v019=UBERON:0001764;3.58e-26;1!UBERON:0001825;3.58e-26;1!UBERON:0004802;1.99e-12;19!UBERON:0000115;1.99e-12;19!UBERON:0002048;7.93e-11;22!UBERON:0004807;7.93e-11;22!UBERON:0000117;7.93e-11;22!UBERON:0000171;7.93e-11;22!UBERON:0000170;7.93e-11;22!UBERON:0005181;2.51e-07;35!UBERON:0000072;4.33e-07;37 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,3.58e-26,1;UBERON:0001825,3.58e-26,1;UBERON:0004802,1.99e-12,19;UBERON:0000115,1.99e-12,19;UBERON:0002048,7.93e-11,22;UBERON:0000117,7.93e-11,22;UBERON:0000171,7.93e-11,22;UBERON:0000170,7.93e-11,22;UBERON:0005597,7.93e-11,22;UBERON:0000118,7.93e-11,22;UBERON:0004807,1.20e-08,28;UBERON:0005178,3.15e-07,34;UBERON:0002224,3.15e-07,34;UBERON:0005181,4.88e-07,35 | |||
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|short_description=p@chr7:120381624..120381637,+ | |short_description=p@chr7:120381624..120381637,+ | ||
}} | }} |
Latest revision as of 05:26, 31 July 2015
Short description: | p@chr7:120381624..120381637, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:120381624..120381637, + |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 4.61e-26 | 1 |
enteroendocrine cell | 4.61e-26 | 1 |
type D enteroendocrine cell | 4.61e-26 | 1 |
somatostatin secreting cell | 4.61e-26 | 1 |
pancreatic D cell | 4.61e-26 | 1 |
progenitor cell of endocrine pancreas | 4.61e-26 | 1 |
lung fibroblast | 7.62e-26 | 1 |
epithelial cell of lung | 1.99e-12 | 19 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 3.58e-26 | 1 |
paranasal sinus | 3.58e-26 | 1 |
respiratory tract epithelium | 1.99e-12 | 19 |
lung epithelium | 1.99e-12 | 19 |
lung | 7.93e-11 | 22 |
respiratory tube | 7.93e-11 | 22 |
respiration organ | 7.93e-11 | 22 |
pair of lungs | 7.93e-11 | 22 |
lung primordium | 7.93e-11 | 22 |
lung bud | 7.93e-11 | 22 |
respiratory system epithelium | 1.20e-08 | 28 |
thoracic cavity element | 3.15e-07 | 34 |
thoracic cavity | 3.15e-07 | 34 |
thoracic segment organ | 4.88e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.58e-26 | 1 |
maxillary sinus cancer | 3.58e-26 | 1 |
somatostatinoma | 4.61e-26 | 1 |
lung small cell carcinoma | 9.82e-26 | 4 |
respiratory system cancer | 3.58e-25 | 16 |
lung cancer | 1.52e-15 | 15 |
bronchus cancer | 3.53e-15 | 7 |
bronchogenic carcinoma | 3.53e-15 | 7 |
lung carcinoma | 4.94e-12 | 9 |