FFCP PHASE1:Hg19::chr7:135002482..135002487,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:135002482..135002487,- | |||
|description=CAGE_peak_at_chr7:135002482..135002487,- | |description=CAGE_peak_at_chr7:135002482..135002487,- | ||
|id=chr7:135002482..135002487,- | |id=chr7:135002482..135002487,- | ||
|ontology_enrichment_celltype=CL:0002202!1.92e-09!9;CL:0002632!1.92e-09!9;CL:0002368!1.96e-08!13;CL:0000068!3.27e-08!3;CL:0000069!3.27e-08!3;CL:0000307!3.27e-08!3;CL:0000377!3.27e-08!3;CL:0002328!4.03e-08!3 | |ontology_enrichment_celltype=CL:0002202!1.92e-09!9;CL:0002632!1.92e-09!9;CL:0002368!1.96e-08!13;CL:0000068!3.27e-08!3;CL:0000069!3.27e-08!3;CL:0000307!3.27e-08!3;CL:0000377!3.27e-08!3;CL:0002328!4.03e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000307;7.42e-25;3!CL:0002202;2.40e-22;9!CL:0002632;2.40e-22;9!CL:0002368;7.91e-22;13!CL:0000575;5.07e-17;2!CL:0002328;8.82e-12;3!CL:0002336;3.25e-09;1!CL:0002261;3.25e-09;1!CL:0002170;3.25e-09;1!CL:0002076;6.81e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.42e-24,3;CL:0000069,1.42e-24,3;CL:0000307,1.42e-24,3;CL:0000377,1.42e-24,3;CL:0002202,3.93e-22,9;CL:0002632,3.93e-22,9;CL:0002368,9.87e-22,13;CL:0000575,7.61e-17,2;CL:0002328,1.04e-11,3;CL:0002076,4.32e-11,42;CL:0002336,1.99e-09,1;CL:0002261,1.99e-09,1;CL:0002170,1.99e-09,1;CL:0000223,9.68e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000377;7.42e-25;3!UBERON:0004874;3.25e-09;1!UBERON:0003918;6.21e-08;10!UBERON:0007687;6.21e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.88e-14!115;UBERON:0004815!4.03e-08!3;UBERON:0002031!4.03e-08!3;UBERON:0001896!5.19e-08!3;UBERON:0005290!5.19e-08!3;UBERON:0010096!5.19e-08!3;UBERON:0006947!6.83e-08!3;UBERON:0004054!6.83e-08!3;UBERON:0000365!9.37e-08!5;UBERON:0001008!1.03e-07!45;UBERON:0007196!1.20e-07!14;UBERON:0001558!1.20e-07!14;UBERON:0006554!9.46e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;2.30e-13;15!UBERON:0001558;2.30e-13;15!UBERON:0006947;8.35e-12;3!UBERON:0004054;8.35e-12;3!UBERON:0004815;8.82e-12;3!UBERON:0002031;8.82e-12;3!UBERON:0001896;9.56e-12;3!UBERON:0005290;9.56e-12;3!UBERON:0003126;5.48e-11;7!UBERON:0001005;5.48e-11;7!UBERON:0001301;9.43e-10;1!UBERON:0001000;3.25e-09;1!UBERON:0000989;3.25e-09;1!UBERON:0000996;3.25e-09;1!UBERON:0002134;3.25e-09;1!UBERON:0008811;3.25e-09;1!UBERON:0005208;3.25e-09;1!UBERON:0004145;3.25e-09;1!UBERON:0005946;3.25e-09;1!UBERON:0005352;3.25e-09;1!UBERON:0005965;3.25e-09;1!UBERON:0002078;3.25e-09;1!UBERON:0005904;4.50e-09;4!UBERON:0000964;5.73e-09;4!UBERON:0010409;5.73e-09;4!UBERON:0010313;1.00e-07;10!UBERON:0002185;2.07e-07;5!UBERON:0003135;4.06e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,3.07e-13,15;UBERON:0001558,3.07e-13,15;UBERON:0001896,9.32e-12,3;UBERON:0005290,9.32e-12,3;UBERON:0010096,9.32e-12,3;UBERON:0004815,1.04e-11,3;UBERON:0002031,1.04e-11,3;UBERON:0006947,1.04e-11,3;UBERON:0004054,1.04e-11,3;UBERON:0003126,7.20e-11,7;UBERON:0001005,7.20e-11,7;UBERON:0001301,9.44e-10,1;UBERON:0000996,1.84e-09,1;UBERON:0000989,2.77e-09,1;UBERON:0008811,2.77e-09,1;UBERON:0006258,2.77e-09,1;UBERON:0005876,2.77e-09,1;UBERON:0004874,2.77e-09,1;UBERON:0002134,3.25e-09,1;UBERON:0005208,3.25e-09,1;UBERON:0005946,3.25e-09,1;UBERON:0005965,3.25e-09,1;UBERON:0002078,3.25e-09,1;UBERON:0001000,4.50e-09,1;UBERON:0005352,4.50e-09,1;UBERON:0005904,5.30e-09,4;UBERON:0000964,7.00e-09,4;UBERON:0010409,7.00e-09,4;UBERON:0004348,7.00e-09,4;UBERON:0005427,7.00e-09,4;UBERON:0010313,1.13e-07,10;UBERON:0002342,1.13e-07,10;UBERON:0005062,1.13e-07,10;UBERON:0002185,2.28e-07,5;UBERON:0003135,4.24e-07,11 | |||
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| ||
|short_description=p@chr7:135002482..135002487,- | |short_description=p@chr7:135002482..135002487,- | ||
}} | }} |
Latest revision as of 06:23, 31 July 2015
Short description: | p@chr7:135002482..135002487, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:135002482..135002487, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.42e-24 | 3 |
branched duct epithelial cell | 1.42e-24 | 3 |
tracheal epithelial cell | 1.42e-24 | 3 |
tracheoblast | 1.42e-24 | 3 |
epithelial cell of tracheobronchial tree | 3.93e-22 | 9 |
epithelial cell of lower respiratory tract | 3.93e-22 | 9 |
respiratory epithelial cell | 9.87e-22 | 13 |
corneal epithelial cell | 7.61e-17 | 2 |
bronchial epithelial cell | 1.04e-11 | 3 |
endo-epithelial cell | 4.32e-11 | 42 |
buccal mucosa cell | 1.99e-09 | 1 |
endothelial cell of viscerocranial mucosa | 1.99e-09 | 1 |
keratinized cell of the oral mucosa | 1.99e-09 | 1 |
endodermal cell | 9.68e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 3.07e-13 | 15 |
lower respiratory tract | 3.07e-13 | 15 |
medulla oblongata | 9.32e-12 | 3 |
myelencephalon | 9.32e-12 | 3 |
future myelencephalon | 9.32e-12 | 3 |
lower respiratory tract epithelium | 1.04e-11 | 3 |
epithelium of bronchus | 1.04e-11 | 3 |
male genital duct | 1.04e-11 | 3 |
internal male genitalia | 1.04e-11 | 3 |
trachea | 7.20e-11 | 7 |
respiratory airway | 7.20e-11 | 7 |
epididymis | 9.44e-10 | 1 |
vagina | 1.84e-09 | 1 |
penis | 2.77e-09 | 1 |
intromittent organ | 2.77e-09 | 1 |
lateral plate mesenchyme | 2.77e-09 | 1 |
undifferentiated genital tubercle | 2.77e-09 | 1 |
somatopleure | 2.77e-09 | 1 |
tricuspid valve | 3.25e-09 | 1 |
right atrium valve | 3.25e-09 | 1 |
outflow tract of atrium | 3.25e-09 | 1 |
outflow part of right atrium | 3.25e-09 | 1 |
right cardiac atrium | 3.25e-09 | 1 |
vas deferens | 4.50e-09 | 1 |
spermatic cord | 4.50e-09 | 1 |
duct of male reproductive system | 5.30e-09 | 4 |
cornea | 7.00e-09 | 4 |
eye surface | 7.00e-09 | 4 |
optic eminence | 7.00e-09 | 4 |
corneal primordium | 7.00e-09 | 4 |
neural crest-derived structure | 1.13e-07 | 10 |
neural crest | 1.13e-07 | 10 |
neural fold | 1.13e-07 | 10 |
bronchus | 2.28e-07 | 5 |
male reproductive organ | 4.24e-07 | 11 |