FFCP PHASE1:Hg19::chr7:40855224..40855239,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:40855224..40855239,+ | |||
|coexpression_cluster_id=C2896 | |||
|description=CAGE_peak_at_chr7:40855224..40855239,+ | |||
|id=chr7:40855224..40855239,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.92e-32!180;CL:0000144!1.70e-27!625;CL:0002371!1.44e-26!591;CL:0000548!8.51e-23!679;CL:0000004!8.51e-23!679;CL:0000255!8.51e-23!679;CL:0000012!2.89e-22!682;CL:0000183!6.10e-22!59;CL:0000680!1.18e-21!57;CL:0000056!1.18e-21!57;CL:0000355!1.18e-21!57;CL:0000187!8.45e-21!54;CL:0000192!4.85e-20!42;CL:0000514!4.85e-20!42;CL:0000220!4.30e-19!246;CL:0002321!1.38e-18!248;CL:0000393!1.67e-17!60;CL:0000211!1.67e-17!60;CL:0000057!2.23e-17!75;CL:0000359!1.97e-16!32;CL:0000003!1.21e-15!722;CL:0000222!7.86e-11!119;CL:0002368!7.43e-09!13;CL:0002159!1.68e-08!13;CL:0000723!1.74e-07!436;CL:0002539!1.82e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.63e-16;32!CL:0002159;5.80e-14;14!CL:0000192;1.75e-11;43!CL:0002368;5.77e-10;13!CL:0002077;7.82e-08;34!CL:0000362;9.60e-08;9!CL:0002539;1.14e-07;10!CL:0000622;3.33e-07;5!CL:0002076;4.69e-07;42!CL:0000197;7.54e-07;6!CL:0000098;7.54e-07;6!CL:0002167;7.54e-07;6!CL:0002559;9.33e-07;5!CL:0000244;9.68e-07;4!CL:0000731;9.68e-07;4!CL:0000187;9.73e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.13e-17,32;CL:0000192,7.12e-16,43;CL:0000514,7.12e-16,43;CL:0002321,1.12e-14,250;CL:0002159,6.22e-14,14;CL:0000187,1.99e-12,55;CL:0000680,3.23e-12,58;CL:0000056,3.23e-12,58;CL:0000355,3.23e-12,58;CL:0000393,2.53e-10,61;CL:0000211,2.53e-10,61;CL:0002368,5.59e-10,13;CL:0002077,6.86e-09,34;CL:0002076,2.08e-08,42;CL:0000362,1.01e-07,9;CL:0002539,1.14e-07,10;CL:0000622,2.99e-07,5;CL:0000197,5.58e-07,6;CL:0000098,5.58e-07,6;CL:0002167,5.58e-07,6;CL:0000057,6.59e-07,76;CL:0002559,9.47e-07,5;CL:0000244,9.82e-07,4;CL:0000731,9.82e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;1.75e-11;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.02e-29!83;UBERON:0002329!3.02e-29!83;UBERON:0003077!3.02e-29!83;UBERON:0003059!3.02e-29!83;UBERON:0007282!3.02e-29!83;UBERON:0009618!3.02e-29!83;UBERON:0007285!3.02e-29!83;UBERON:0000486!8.92e-27!82;UBERON:0004290!5.07e-23!70;UBERON:0005256!1.83e-19!143;UBERON:0001134!6.51e-19!61;UBERON:0002036!6.51e-19!61;UBERON:0003082!6.51e-19!61;UBERON:0002385!1.08e-17!63;UBERON:0001015!1.08e-17!63;UBERON:0000383!1.08e-17!63;UBERON:0003102!7.32e-17!95;UBERON:0002100!5.53e-15!216;UBERON:0001637!3.42e-14!42;UBERON:0003509!3.42e-14!42;UBERON:0004572!3.42e-14!42;UBERON:0000475!2.29e-12!365;UBERON:0004573!2.41e-11!33;UBERON:0004571!2.41e-11!33;UBERON:0003104!7.77e-11!238;UBERON:0009142!7.77e-11!238;UBERON:0002199!1.40e-09!45;UBERON:0002416!1.40e-09!45;UBERON:0001981!1.57e-09!60;UBERON:0007500!1.57e-09!60;UBERON:0004537!1.57e-09!60;UBERON:0006965!1.57e-09!60;UBERON:0004872!4.09e-09!84;UBERON:0002097!9.43e-09!40;UBERON:0000490!3.16e-08!138;UBERON:0000119!9.19e-08!312;UBERON:0003914!1.04e-07!118;UBERON:0004237!1.82e-07!10;UBERON:0004695!1.82e-07!10;UBERON:0002111!1.82e-07!10;UBERON:0004178!1.82e-07!10;UBERON:0000483!2.04e-07!309;UBERON:0000075!2.23e-07!13;UBERON:0005944!2.23e-07!13;UBERON:0004288!2.23e-07!13;UBERON:0003089!2.23e-07!13;UBERON:0000055!2.99e-07!69;UBERON:0000481!4.20e-07!347;UBERON:0002049!6.46e-07!79;UBERON:0007798!6.46e-07!79;UBERON:0001135!8.68e-07!15;UBERON:0001828!8.93e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.50e-09;33!UBERON:0004571;1.50e-09;33!UBERON:0001637;4.35e-08;42!UBERON:0003509;4.35e-08;42!UBERON:0004572;4.35e-08;42!UBERON:0001828;6.71e-08;8!UBERON:0001003;6.99e-08;15!UBERON:0007376;6.99e-08;15!UBERON:0000075;9.94e-08;16!UBERON:0004237;1.14e-07;10!UBERON:0004695;1.14e-07;10!UBERON:0002111;1.14e-07;10!UBERON:0004178;1.14e-07;10!UBERON:0000165;4.45e-07;28!UBERON:0003102;5.51e-07;50!UBERON:0010371;6.43e-07;31!UBERON:0011137;7.06e-07;11!UBERON:0010323;7.06e-07;11!UBERON:0001135;9.05e-07;15!UBERON:0002073;9.33e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,1.14e-17,83;UBERON:0003102,1.08e-16,99;UBERON:0007524,5.66e-14,73;UBERON:0002329,9.84e-14,71;UBERON:0003059,9.84e-14,71;UBERON:0007282,9.84e-14,71;UBERON:0004290,9.84e-14,71;UBERON:0009618,9.84e-14,71;UBERON:0003077,2.19e-13,72;UBERON:0007285,2.19e-13,72;UBERON:0001637,7.86e-13,42;UBERON:0003509,7.86e-13,42;UBERON:0004572,7.86e-13,42;UBERON:0007503,2.80e-12,78;UBERON:0004573,4.54e-11,33;UBERON:0004571,4.54e-11,33;UBERON:0001134,7.84e-11,62;UBERON:0002036,7.84e-11,62;UBERON:0003082,7.84e-11,62;UBERON:0002385,3.27e-10,64;UBERON:0001015,3.27e-10,64;UBERON:0000383,3.27e-10,64;UBERON:0007500,2.37e-08,59;UBERON:0001981,2.37e-08,59;UBERON:0004537,2.37e-08,59;UBERON:0006965,2.37e-08,59;UBERON:0002199,6.12e-08,46;UBERON:0002416,6.12e-08,46;UBERON:0002097,7.09e-08,41;UBERON:0001003,7.11e-08,15;UBERON:0007376,7.11e-08,15;UBERON:0007383,7.11e-08,15;UBERON:0001828,8.31e-08,8;UBERON:0003104,8.84e-08,160;UBERON:0009142,8.84e-08,160;UBERON:0000075,9.55e-08,16;UBERON:0000165,1.13e-07,29;UBERON:0000930,1.13e-07,29;UBERON:0004237,1.14e-07,10;UBERON:0004695,1.14e-07,10;UBERON:0002111,1.14e-07,10;UBERON:0004178,1.14e-07,10;UBERON:0004872,1.29e-07,83;UBERON:0000033,1.72e-07,56;UBERON:0010323,6.85e-07,11;UBERON:0000055,7.05e-07,68;UBERON:0002073,9.47e-07,5;UBERON:0005086,9.47e-07,5 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.281908808191942,1.0007329835313,0,1.74467704820074,2.53299878168311,0.631719873426831,0,0.737201809504527,0.697801167972428,0.655324116390517,0.263766978228454,1.36142988256051,3.64537113300707,10.7572023432284,10.8485015044316,13.1455816269727,9.27072317701963,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,24.824373060931,19.8795906393645,21.8154865998405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,2.00535164254356,0.434539556882471,0,0,0,0.221729397462564,0.175669571386252,0,28.4150324868183,14.4605932685927,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.626984899610432,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,1.28241220751285,0,0,6.97750483428055,0.496971951695318,5.44511200157693,1.45650098894541,0.573673241497627,1.41867352879343,1.68203280042692,1.06748995729705,3.45334567784024,0,0.538842688278752,0.490385709340376,0.302714855289863,0,0.234321431833797,3.43376084513353,2.85235910772225,4.93180645820944,0.587172493218824,0.161872944368132,0.280901613404497,2.04154171254893,0.737005903870608,2.16984140469107,8.31602000097437,5.19260551484969,0,1.43723628363248,0.336672227908132,0.375355559615893,2.21651292387346,4.82875382968922,3.98434134538726,6.61047459189026,0.567160915800105,0.538168907066586,6.83383644219416,0.847727604638247,0.900273288253207,1.13357782162283,1.03056216018252,1.48893485065272,0.168776332241266,0.487185025805993,0.252433774244115,0.828449087780694,1.61646056818812,0,1.0075209822764,1.3564847384839,18.9395636100031,28.6383426620376,15.7742527463952,0,0,0,0,0,0,3.12899064659632,7.71889125831462,2.76269842704961,4.17931135228781,17.3251075600701,0,0,0.241011029883482,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0,33.0348359079963,20.2323155863715,19.1005047582099,7.03672183204825,0.325808305310325,2.07986957055916,0,0,1.05667824812239,0,0,0,0,0,0,0,0,15.9347517777521,65.0090836129586,30.9069711988402,3.85101647622248,24.7038847736868,52.5234270456339,0,0,0,0,0,0,0.381988425558278,0,0,0,0.300343057843917,0,0.336393253036082,0.43596006883328,0.07333828582095,0.646358578788889,3.57656445851882,0.845302752556,1.32969058292435,1.04007436911366,0.771622122786426,0,0.532844358032199,0.285955987316295,0,1.64648067356154,0.325736184293735,0,0,0.602878754119172,0,0.599837947092342,0,0,0,2.15662369942424,4.59447743336456,2.85273810081437,0.434343920002738,0.410952645100767,1.61154866915906,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,3.25518028439683,2.28767947683888,3.03329280955175,4.57337003598411,5.38850508966481,3.61135319673263,9.09630016223939,2.0694614258501,1.32845119707087,0.368738337083406,2.86715927744673,0.391602314925481,0.343143423810856,0,0,0,0,1.66435439510497,1.20956117331872,0.496215615637554,0.767309866440312,0.841980283299221,0.384417447767103,0.511707249066704,0.804269605718038,4.45254199334973,0.462629081407967,1.24293207719189,0.821271560138091,3.11552657510173,0.929683027679674,0,23.0582440848778,4.14364450211533,0.34444334449382,0.728364672026868,1.57349297951309,1.35359883872224,1.15523005656622,1.56869953835371,2.92278449306521,1.26661954671451,0,0.170093705276516,0.215915916102139,0,0.812839312631559,1.50506932156456,0.254876273045038,0,0,0,0,1.02580050046556,0,0,0,0,0,28.7132768998086,33.8031327938991,0,0.870036464629098,0.308097234229289,0.767518373630648,0.551346289938122,1.71872391789238,0.580066775656914,0.255679882248303,0.0890320356467374,8.59481559877086,10.3782636377157,8.67766444963172,3.54052232994425,5.57814659156743,0.31481234683064,2.0911118104818,0.924100740528266,4.25844824253617,2.60979897622522,3.33583594387056,3.2918723950658,0,1.2655176988749,1.90630193923825,3.32667128704734,0,2.22742273548156,1.56989728039846,2.51821440616641,1.09814811894422,0.589062011728432,3.23491970517306,7.92551605865041,4.63384301862879,0.975267478179181,0.243713489631284,4.22600587027022,0.818999468447914,0.565621727814851,1.13008116620243,0.551365343546124,1.99031692572366,1.75380354101505,2.89387767133344,0.655894752046633,10.5513396020606,5.5768229657955,2.25356482025793,0.143411352204052,0.0982490410131212,7.133421029625,0.354761064070598,0.844430541190656,0,0,0,20.4953100105341,36.1963228789325,22.8671068208777,0,34.0099244410272,15.1624328100863,20.3977870626871,13.5536806122106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0.23874448473769,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,6.22079175323615,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.261177619741208,0,0.51595809741485,0,0,0,0.09698901648841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| |||
|short_description=p@chr7:40855224..40855239,+ | |||
}} |
Latest revision as of 10:00, 31 July 2015
Short description: | p@chr7:40855224..40855239, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:40855224..40855239, + |
Coexpression cluster: | C2896_Mallassezderived_Mammary_Keratinocyte_mesodermal_Sebocyte_Gingival_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.13e-17 | 32 |
smooth muscle cell | 7.12e-16 | 43 |
smooth muscle myoblast | 7.12e-16 | 43 |
embryonic cell | 1.12e-14 | 250 |
general ecto-epithelial cell | 6.22e-14 | 14 |
muscle cell | 1.99e-12 | 55 |
muscle precursor cell | 3.23e-12 | 58 |
myoblast | 3.23e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.23e-12 | 58 |
electrically responsive cell | 2.53e-10 | 61 |
electrically active cell | 2.53e-10 | 61 |
respiratory epithelial cell | 5.59e-10 | 13 |
ecto-epithelial cell | 6.86e-09 | 34 |
endo-epithelial cell | 2.08e-08 | 42 |
epidermal cell | 1.01e-07 | 9 |
aortic smooth muscle cell | 1.14e-07 | 10 |
acinar cell | 2.99e-07 | 5 |
receptor cell | 5.58e-07 | 6 |
sensory epithelial cell | 5.58e-07 | 6 |
olfactory epithelial cell | 5.58e-07 | 6 |
fibroblast | 6.59e-07 | 76 |
hair follicle cell | 9.47e-07 | 5 |
transitional epithelial cell | 9.82e-07 | 4 |
urothelial cell | 9.82e-07 | 4 |