FFCP PHASE1:Hg19::chr7:40855246..40855275,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:40855246..40855275,+ | |||
|coexpression_cluster_id=C2896 | |||
|description=CAGE_peak_at_chr7:40855246..40855275,+ | |description=CAGE_peak_at_chr7:40855246..40855275,+ | ||
|id=chr7:40855246..40855275,+ | |id=chr7:40855246..40855275,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.74e-28!180;CL:0000144!1.98e-24!625;CL:0002371!2.23e-22!591;CL:0000220!4.58e-22!246;CL:0002321!1.51e-21!248;CL:0000057!1.35e-20!75;CL:0000548!3.77e-20!679;CL:0000004!3.77e-20!679;CL:0000255!3.77e-20!679;CL:0000012!1.08e-19!682;CL:0000192!1.64e-16!42;CL:0000514!1.64e-16!42;CL:0000680!1.83e-15!57;CL:0000056!1.83e-15!57;CL:0000355!1.83e-15!57;CL:0000187!2.51e-15!54;CL:0000183!7.40e-15!59;CL:0000003!5.48e-14!722;CL:0000359!1.38e-13!32;CL:0000393!5.71e-13!60;CL:0000211!5.71e-13!60;CL:0000222!1.05e-11!119;CL:0002159!3.66e-09!13;CL:0002620!5.54e-09!23;CL:0002368!2.43e-08!13;CL:0000221!7.65e-07!71;CL:0002076!7.98e-07!43 | |ontology_enrichment_celltype=CL:0000055!3.74e-28!180;CL:0000144!1.98e-24!625;CL:0002371!2.23e-22!591;CL:0000220!4.58e-22!246;CL:0002321!1.51e-21!248;CL:0000057!1.35e-20!75;CL:0000548!3.77e-20!679;CL:0000004!3.77e-20!679;CL:0000255!3.77e-20!679;CL:0000012!1.08e-19!682;CL:0000192!1.64e-16!42;CL:0000514!1.64e-16!42;CL:0000680!1.83e-15!57;CL:0000056!1.83e-15!57;CL:0000355!1.83e-15!57;CL:0000187!2.51e-15!54;CL:0000183!7.40e-15!59;CL:0000003!5.48e-14!722;CL:0000359!1.38e-13!32;CL:0000393!5.71e-13!60;CL:0000211!5.71e-13!60;CL:0000222!1.05e-11!119;CL:0002159!3.66e-09!13;CL:0002620!5.54e-09!23;CL:0002368!2.43e-08!13;CL:0000221!7.65e-07!71;CL:0002076!7.98e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002159;6.37e-17;14!CL:0002368;2.69e-12;13!CL:0000359;1.91e-11;32!CL:0002077;1.76e-09;34!CL:0000154;2.03e-09;6!CL:0002076;2.54e-09;42!CL:0000362;3.56e-09;9!CL:0000622;1.69e-08;5!CL:0000244;1.24e-07;4!CL:0000731;1.24e-07;4!CL:0002559;1.31e-07;5!CL:0000192;4.39e-07;43!CL:0002539;5.05e-07;10!CL:0002202;5.62e-07;9!CL:0002632;5.62e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,5.00e-17,14;CL:0002321,3.40e-13,250;CL:0002368,2.59e-12,13;CL:0000359,4.21e-12,32;CL:0000057,9.14e-12,76;CL:0002076,2.96e-11,42;CL:0002077,9.99e-11,34;CL:0000192,1.00e-09,43;CL:0000514,1.00e-09,43;CL:0000154,1.91e-09,6;CL:0000362,2.82e-09,9;CL:0000622,1.93e-08,5;CL:0002559,9.21e-08,5;CL:0000244,1.17e-07,4;CL:0000731,1.17e-07,4;CL:0000187,3.24e-07,55;CL:0000221,3.29e-07,72;CL:0002539,5.13e-07,10;CL:0002202,5.68e-07,9;CL:0002632,5.68e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000514;4.39e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.95e-25!83;UBERON:0002329!3.95e-25!83;UBERON:0003077!3.95e-25!83;UBERON:0003059!3.95e-25!83;UBERON:0007282!3.95e-25!83;UBERON:0009618!3.95e-25!83;UBERON:0007285!3.95e-25!83;UBERON:0000486!6.17e-23!82;UBERON:0003102!4.42e-19!95;UBERON:0004290!8.54e-19!70;UBERON:0005256!2.04e-14!143;UBERON:0001134!2.72e-14!61;UBERON:0002036!2.72e-14!61;UBERON:0003082!2.72e-14!61;UBERON:0002385!2.36e-13!63;UBERON:0001015!2.36e-13!63;UBERON:0000383!2.36e-13!63;UBERON:0002097!1.23e-11!40;UBERON:0000475!1.99e-11!365;UBERON:0002199!7.54e-11!45;UBERON:0002416!7.54e-11!45;UBERON:0002100!9.97e-11!216;UBERON:0001637!1.07e-10!42;UBERON:0003509!1.07e-10!42;UBERON:0004572!1.07e-10!42;UBERON:0004573!2.37e-09!33;UBERON:0004571!2.37e-09!33;UBERON:0004872!2.81e-09!84;UBERON:0002049!6.13e-09!79;UBERON:0007798!6.13e-09!79;UBERON:0003104!8.64e-09!238;UBERON:0009142!8.64e-09!238;UBERON:0000075!7.68e-08!13;UBERON:0005944!7.68e-08!13;UBERON:0004288!7.68e-08!13;UBERON:0003089!7.68e-08!13;UBERON:0001981!8.68e-08!60;UBERON:0007500!8.68e-08!60;UBERON:0004537!8.68e-08!60;UBERON:0006965!8.68e-08!60;UBERON:0000119!9.40e-08!312;UBERON:0000483!1.52e-07!309;UBERON:0000055!2.10e-07!69;UBERON:0004535!3.27e-07!110;UBERON:0001828!3.79e-07!8;UBERON:0003129!5.00e-07!11;UBERON:0000467!7.56e-07!625;UBERON:0000165!9.24e-07!28;UBERON:0000930!9.24e-07!28;UBERON:0000480!9.43e-07!626 | |ontology_enrichment_uberon=UBERON:0000914!3.95e-25!83;UBERON:0002329!3.95e-25!83;UBERON:0003077!3.95e-25!83;UBERON:0003059!3.95e-25!83;UBERON:0007282!3.95e-25!83;UBERON:0009618!3.95e-25!83;UBERON:0007285!3.95e-25!83;UBERON:0000486!6.17e-23!82;UBERON:0003102!4.42e-19!95;UBERON:0004290!8.54e-19!70;UBERON:0005256!2.04e-14!143;UBERON:0001134!2.72e-14!61;UBERON:0002036!2.72e-14!61;UBERON:0003082!2.72e-14!61;UBERON:0002385!2.36e-13!63;UBERON:0001015!2.36e-13!63;UBERON:0000383!2.36e-13!63;UBERON:0002097!1.23e-11!40;UBERON:0000475!1.99e-11!365;UBERON:0002199!7.54e-11!45;UBERON:0002416!7.54e-11!45;UBERON:0002100!9.97e-11!216;UBERON:0001637!1.07e-10!42;UBERON:0003509!1.07e-10!42;UBERON:0004572!1.07e-10!42;UBERON:0004573!2.37e-09!33;UBERON:0004571!2.37e-09!33;UBERON:0004872!2.81e-09!84;UBERON:0002049!6.13e-09!79;UBERON:0007798!6.13e-09!79;UBERON:0003104!8.64e-09!238;UBERON:0009142!8.64e-09!238;UBERON:0000075!7.68e-08!13;UBERON:0005944!7.68e-08!13;UBERON:0004288!7.68e-08!13;UBERON:0003089!7.68e-08!13;UBERON:0001981!8.68e-08!60;UBERON:0007500!8.68e-08!60;UBERON:0004537!8.68e-08!60;UBERON:0006965!8.68e-08!60;UBERON:0000119!9.40e-08!312;UBERON:0000483!1.52e-07!309;UBERON:0000055!2.10e-07!69;UBERON:0004535!3.27e-07!110;UBERON:0001828!3.79e-07!8;UBERON:0003129!5.00e-07!11;UBERON:0000467!7.56e-07!625;UBERON:0000165!9.24e-07!28;UBERON:0000930!9.24e-07!28;UBERON:0000480!9.43e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0000165;2.12e-10;28!UBERON:0011137;2.55e-10;11!UBERON:0010323;2.55e-10;11!UBERON:0001828;1.29e-09;8!UBERON:0001003;1.37e-09;15!UBERON:0007376;1.37e-09;15!UBERON:0003102;3.64e-08;50!UBERON:0002097;3.94e-08;41!UBERON:0002199;5.25e-08;46!UBERON:0002416;5.25e-08;46!UBERON:0002073;1.31e-07;5!UBERON:0001708;1.70e-07;4!UBERON:0008895;1.70e-07;4!UBERON:0010371;3.40e-07;31!UBERON:0004237;5.05e-07;10!UBERON:0004695;5.05e-07;10!UBERON:0002111;5.05e-07;10!UBERON:0004178;5.05e-07;10!UBERON:0003729;5.06e-07;13 | |||
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| ||
|short_description=p@chr7:40855246..40855275,+ | |short_description=p@chr7:40855246..40855275,+ | ||
}} | }} |
Latest revision as of 10:00, 31 July 2015
Short description: | p@chr7:40855246..40855275, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:40855246..40855275, + |
Coexpression cluster: | C2896_Mallassezderived_Mammary_Keratinocyte_mesodermal_Sebocyte_Gingival_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 5.00e-17 | 14 |
embryonic cell | 3.40e-13 | 250 |
respiratory epithelial cell | 2.59e-12 | 13 |
vascular associated smooth muscle cell | 4.21e-12 | 32 |
fibroblast | 9.14e-12 | 76 |
endo-epithelial cell | 2.96e-11 | 42 |
ecto-epithelial cell | 9.99e-11 | 34 |
smooth muscle cell | 1.00e-09 | 43 |
smooth muscle myoblast | 1.00e-09 | 43 |
protein secreting cell | 1.91e-09 | 6 |
epidermal cell | 2.82e-09 | 9 |
acinar cell | 1.93e-08 | 5 |
hair follicle cell | 9.21e-08 | 5 |
transitional epithelial cell | 1.17e-07 | 4 |
urothelial cell | 1.17e-07 | 4 |
muscle cell | 3.24e-07 | 55 |
ectodermal cell | 3.29e-07 | 72 |
aortic smooth muscle cell | 5.13e-07 | 10 |
epithelial cell of tracheobronchial tree | 5.68e-07 | 9 |
epithelial cell of lower respiratory tract | 5.68e-07 | 9 |