FFCP PHASE1:Hg19::chr7:4833949..4833955,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:4833949..4833955,+ | |||
|coexpression_cluster_id=C330 | |coexpression_cluster_id=C330 | ||
|description=CAGE_peak_at_chr7:4833949..4833955,+ | |description=CAGE_peak_at_chr7:4833949..4833955,+ | ||
|id=chr7:4833949..4833955,+ | |id=chr7:4833949..4833955,+ | ||
|ontology_enrichment_celltype=CL:0000039!2.35e-12!7;CL:0000586!2.35e-12!7;CL:0002541!1.23e-08!3 | |ontology_enrichment_celltype=CL:0000039!2.35e-12!7;CL:0000586!2.35e-12!7;CL:0002541!1.23e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;5.37e-20;3!CL:0000039;5.82e-09;7!CL:0000586;5.82e-09;7!CL:0000349;2.37e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.88e-20,3;CL:0000039,5.82e-09,7;CL:0000586,5.82e-09,7;CL:0000349,2.32e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:178;2.38e-15;1!DOID:326;2.38e-15;1!DOID:3978;2.38e-15;1!DOID:3394;2.38e-15;1!DOID:5844;2.38e-15;1!DOID:3908;1.26e-12;5!DOID:3910;1.20e-08;2!DOID:114;2.48e-08;2!DOID:3193;2.48e-08;2!DOID:962;2.48e-08;2!DOID:3905;2.08e-07;9!DOID:1115;5.45e-07;20 | |||
|ontology_enrichment_disease_v019_2=DOID:178,2.38e-15,1;DOID:326,2.38e-15,1;DOID:3978,2.38e-15,1;DOID:3394,2.38e-15,1;DOID:5844,2.38e-15,1;DOID:3908,1.26e-12,5;DOID:3910,1.20e-08,2;DOID:114,2.48e-08,2;DOID:3193,2.67e-08,2;DOID:962,2.67e-08,2;DOID:3905,2.08e-07,9;DOID:1115,5.56e-07,20 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003124;5.37e-20;3!UBERON:0000920;5.37e-20;3!UBERON:0005631;1.82e-13;10!UBERON:0000158;1.82e-13;10!UBERON:0004903;1.20e-08;2!UBERON:0002173;1.20e-08;2!UBERON:0002186;1.20e-08;2!UBERON:0003714;2.48e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.88e-20,3;UBERON:0005631,8.44e-10,14;UBERON:0000158,8.44e-10,14;UBERON:0003124,3.88e-09,7;UBERON:0004903,1.20e-08,2;UBERON:0002173,1.20e-08,2;UBERON:0002186,1.20e-08,2;UBERON:0003714,2.67e-08,2 | |||
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| ||
|short_description=p@chr7:4833949..4833955,+ | |short_description=p@chr7:4833949..4833955,+ | ||
}} | }} |
Latest revision as of 10:35, 31 July 2015
Short description: | p@chr7:4833949..4833955, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:4833949..4833955, + |
Coexpression cluster: | C330_bronchioalveolar_oral_signet_embryonic_lymphangiectasia_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.88e-20 | 3 |
germ line cell | 5.82e-09 | 7 |
germ cell | 5.82e-09 | 7 |
extraembryonic cell | 2.32e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.88e-20 | 3 |
extraembryonic membrane | 8.44e-10 | 14 |
membranous layer | 8.44e-10 | 14 |
chorion | 3.88e-09 | 7 |
bronchoalveolar duct junction | 1.20e-08 | 2 |
alveolar duct | 1.20e-08 | 2 |
bronchiole | 1.20e-08 | 2 |
neural tissue | 2.67e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 2.38e-15 | 1 |
ischemia | 2.38e-15 | 1 |
extrinsic cardiomyopathy | 2.38e-15 | 1 |
myocardial ischemia | 2.38e-15 | 1 |
myocardial infarction | 2.38e-15 | 1 |
non-small cell lung carcinoma | 1.26e-12 | 5 |
lung adenocarcinoma | 1.20e-08 | 2 |
heart disease | 2.48e-08 | 2 |
peripheral nerve sheath neoplasm | 2.67e-08 | 2 |
neurofibroma | 2.67e-08 | 2 |
lung carcinoma | 2.08e-07 | 9 |
sarcoma | 5.56e-07 | 20 |