FFCP PHASE1:Hg19::chr8:124926807..124926826,+: Difference between revisions
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|id=chr8:124926807..124926826,+
|short_description=p@chr8:124926807..124926826,+
|description=CAGE_peak_at_chr8:124926807..124926826,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:124926807..124926826,+ | |||
|coexpression_cluster_id=C3948 | |||
|description=CAGE_peak_at_chr8:124926807..124926826,+ | |||
|id=chr8:124926807..124926826,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002570;1.43e-07;8!CL:0002552;5.26e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002570,1.40e-07,8;CL:0002552,4.89e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001046!4.35e-09!19;UBERON:0005156!9.02e-07!59;UBERON:0000990!9.02e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.77e-20;17!UBERON:0005409;1.09e-18;22!UBERON:0000059;2.70e-12;11!UBERON:0004921;2.85e-12;33!UBERON:0002360;1.16e-08;2!UBERON:0000094;1.16e-08;2!UBERON:0010743;1.16e-08;2!UBERON:0003127;1.46e-08;2!UBERON:0001555;1.80e-08;54!UBERON:0002108;6.13e-08;4!UBERON:0004907;2.06e-07;5!UBERON:0001155;3.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.75e-20,17;UBERON:0005409,3.02e-16,25;UBERON:0000059,2.79e-12,11;UBERON:0004119,2.51e-10,160;UBERON:0000925,2.51e-10,160;UBERON:0006595,2.51e-10,160;UBERON:0001007,5.67e-10,145;UBERON:0001555,5.67e-10,145;UBERON:0007026,5.67e-10,145;UBERON:0003127,1.14e-08,2;UBERON:0002360,1.28e-08,2;UBERON:0000094,1.28e-08,2;UBERON:0010743,1.28e-08,2;UBERON:0002108,6.01e-08,4;UBERON:0004907,2.11e-07,5;UBERON:0001155,3.54e-07,9;UBERON:0004921,5.86e-07,118 | |||
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| ||
|short_description=p@chr8:124926807..124926826,+ | |||
}} | }} |
Latest revision as of 14:37, 31 July 2015
Short description: | p@chr8:124926807..124926826, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:124926807..124926826, + |
Coexpression cluster: | C3948_stomach_colon_temporal_MCF7_rectum_duodenum_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 1.40e-07 | 8 |
fibroblast of gingiva | 4.89e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.75e-20 | 17 |
gastrointestinal system | 3.02e-16 | 25 |
large intestine | 2.79e-12 | 11 |
endoderm-derived structure | 2.51e-10 | 160 |
endoderm | 2.51e-10 | 160 |
presumptive endoderm | 2.51e-10 | 160 |
digestive system | 5.67e-10 | 145 |
digestive tract | 5.67e-10 | 145 |
primitive gut | 5.67e-10 | 145 |
open tracheal system trachea | 1.14e-08 | 2 |
meninx | 1.28e-08 | 2 |
membrane organ | 1.28e-08 | 2 |
meningeal cluster | 1.28e-08 | 2 |
small intestine | 6.01e-08 | 4 |
lower digestive tract | 2.11e-07 | 5 |
colon | 3.54e-07 | 9 |
subdivision of digestive tract | 5.86e-07 | 118 |