FFCP PHASE1:Hg19::chr8:145013517..145013546,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:145013517..145013546,+ | |||
|coexpression_cluster_id=C578 | |||
|description=CAGE_peak_at_chr8:145013517..145013546,+ | |description=CAGE_peak_at_chr8:145013517..145013546,+ | ||
|id=chr8:145013517..145013546,+ | |id=chr8:145013517..145013546,+ | ||
|ontology_enrichment_celltype=CL:0000738!5.07e-10!140;CL:0002057!3.57e-09!42;CL:0002087!3.86e-09!119;CL:0000860!8.26e-09!45;CL:0000624!9.41e-09!6;CL:0000791!3.74e-08!18;CL:0000789!3.74e-08!18;CL:0002420!3.74e-08!18;CL:0002419!3.74e-08!18;CL:0000790!3.74e-08!18;CL:0002031!9.95e-08!124;CL:0000037!1.62e-07!172;CL:0000566!1.62e-07!172;CL:0000988!9.71e-07!182 | |ontology_enrichment_celltype=CL:0000738!5.07e-10!140;CL:0002057!3.57e-09!42;CL:0002087!3.86e-09!119;CL:0000860!8.26e-09!45;CL:0000624!9.41e-09!6;CL:0000791!3.74e-08!18;CL:0000789!3.74e-08!18;CL:0002420!3.74e-08!18;CL:0002419!3.74e-08!18;CL:0000790!3.74e-08!18;CL:0002031!9.95e-08!124;CL:0000037!1.62e-07!172;CL:0000566!1.62e-07!172;CL:0000988!9.71e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000624;4.71e-41;6!CL:0000791;2.90e-30;18!CL:0000789;2.90e-30;18!CL:0002419;2.90e-30;18!CL:0000623;3.16e-22;3!CL:0000084;2.10e-21;25!CL:0000898;3.69e-21;3!CL:0000815;8.39e-15;2!CL:0000792;8.39e-15;2!CL:0002677;8.39e-15;2!CL:0000226;5.67e-10;3!CL:0000767;5.67e-10;3!CL:0000842;5.67e-10;3!CL:0000542;7.99e-10;53!CL:0000895;4.25e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.85e-41,6;CL:0000791,2.58e-30,18;CL:0000789,2.58e-30,18;CL:0002420,2.58e-30,18;CL:0002419,2.58e-30,18;CL:0000790,2.58e-30,18;CL:0000623,3.52e-22,3;CL:0000825,3.52e-22,3;CL:0000084,1.93e-21,25;CL:0000827,1.93e-21,25;CL:0000898,5.41e-21,3;CL:0000838,2.34e-17,52;CL:0000542,5.47e-17,53;CL:0000051,5.47e-17,53;CL:0000738,2.04e-16,136;CL:0000815,1.11e-14,2;CL:0000792,1.11e-14,2;CL:0002677,1.11e-14,2;CL:0002087,4.87e-14,115;CL:0000037,1.43e-12,168;CL:0000988,9.73e-12,177;CL:0002031,1.09e-11,120;CL:0002032,2.07e-10,161;CL:0000837,2.07e-10,161;CL:0000226,5.94e-10,3;CL:0000842,5.94e-10,3;CL:0000767,7.46e-10,3;CL:0000810,4.72e-08,1;CL:0000895,4.72e-08,1;CL:0002436,4.72e-08,1;CL:0002427,4.72e-08,1;CL:0002428,4.72e-08,1;CL:0002429,4.72e-08,1;CL:0002433,4.72e-08,1;CL:0002431,4.72e-08,1;CL:0002432,4.72e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000790;2.90e-30;18!CL:0000051;7.99e-10;53!CL:0002427;4.25e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.09e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.33e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.527533956456907,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,1.18009283054671,1.53531759238885,0.77408061658038,0,0.6024118375565,0.369754010166788,0,0,0.293600439334847,1.66198622559563,0.401088894940283,1.95309783644267,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,1.35426486594342,0.376484679085209,0.818718450173537,0,0.612167784741805,0.320929027076094,0,0.659702600373432,0.398927315243264,0,0.580418477257168,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0.211255286311942,0.425208599930087,0.209658645508376,0.112328631146495,0,0.16072558669708,0,0,0,0,0.546138611262131,0,0,0,0,0,0.954053754535364,0,0,0,14.5388461436928,1.68152568894461,0,1.96709770113833,4.71612915298998,3.08402248499264,0,1.30368906653436,0.473447805734733,1.94826728407911,0,2.3568472597987,0.443067789167242,0.812411591295047,0,0.260118695119756,0,0,0.579606171470105,0.296573126324121,0.267540828089713,0,0,1.53288197440768,1.03088233644789,0.253019692019503,0.318565414324097,0,0,0,0.127986611154418,0,0.236777252044017,0,6.8546292696409,9.36040685242276,5.79297615531196,2.43806866313962,0,0,0,0,0.144846518960824,0,0.973269740605272,0,0,0.087834785693126,0,0.364295288292542,0.741568885568859,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0.183201743930407,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.300091096084402,0,0,0,0,0,0.504867548488229,0,0,0.355009592516614,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0.721879481669586,0,0.168584690078102,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,4.53170748464433,5.60631694634745,3.08023287071396,0,0,0,0,0,0,0,0.828831026872071,0,0.500170521059677,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0.343143423810856,1.6541442089831,0.215714200818617,1.49418580924822,0.303127571446259,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0.330569830721956,0.384380134730212,0.510450849978337,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0.196498082026242,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,1.68471475667626,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0.199579371432817,0,0.423347165447766,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0.718946809178615,0,0,0.0986434056369336,0,2.22273980289274,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0.30607276163049,0.063186579628488,0,0,0.664653872707185,0,0.313932918407225,0,0,0,0,0.293977192243133,0.174118413160805,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0.39961921916426,0,0,0,0.288109595976299,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,2.32140586367385,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0.150257608997218,0,0,0,0.322231671127465,0,0,0,0,0.336749488765919,0,0.385239660814607,0.643324774124777,0,0,0.463044948647668,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0.115525666150338,0,0.690359926060101,0,0,0,0,0,0.327543835020193,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0.118193840883968,0.222462803784138,0,0,0.560544326627578,0,0.215927591218621,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0.691259661814092,0,0.236664001461131,0,0,0.22910686854405,0.31020638566432,0,0.223710863595585,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0.352894871715692,0.320965466756673,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.248298857183432,0,0,0,0,0,0.0673520530145875,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.527533956456907,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,1.18009283054671,1.53531759238885,0.77408061658038,0,0.6024118375565,0.369754010166788,0,0,0.293600439334847,1.66198622559563,0.401088894940283,1.95309783644267,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,1.35426486594342,0.376484679085209,0.818718450173537,0,0.612167784741805,0.320929027076094,0,0.659702600373432,0.398927315243264,0,0.580418477257168,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0.211255286311942,0.425208599930087,0.209658645508376,0.112328631146495,0,0.16072558669708,0,0,0,0,0.546138611262131,0,0,0,0,0,0.954053754535364,0,0,0,14.5388461436928,1.68152568894461,0,1.96709770113833,4.71612915298998,3.08402248499264,0,1.30368906653436,0.473447805734733,1.94826728407911,0,2.3568472597987,0.443067789167242,0.812411591295047,0,0.260118695119756,0,0,0.579606171470105,0.296573126324121,0.267540828089713,0,0,1.53288197440768,1.03088233644789,0.253019692019503,0.318565414324097,0,0,0,0.127986611154418,0,0.236777252044017,0,6.8546292696409,9.36040685242276,5.79297615531196,2.43806866313962,0,0,0,0,0.144846518960824,0,0.973269740605272,0,0,0.087834785693126,0,0.364295288292542,0.741568885568859,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0.183201743930407,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.300091096084402,0,0,0,0,0,0.504867548488229,0,0,0.355009592516614,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0.721879481669586,0,0.168584690078102,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,4.53170748464433,5.60631694634745,3.08023287071396,0,0,0,0,0,0,0,0.828831026872071,0,0.500170521059677,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0.343143423810856,1.6541442089831,0.215714200818617,1.49418580924822,0.303127571446259,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0.330569830721956,0.384380134730212,0.510450849978337,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0.196498082026242,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,1.68471475667626,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0.199579371432817,0,0.423347165447766,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0.718946809178615,0,0,0.0986434056369336,0,2.22273980289274,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0.30607276163049,0.063186579628488,0,0,0.664653872707185,0,0.313932918407225,0,0,0,0,0.293977192243133,0.174118413160805,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0.39961921916426,0,0,0,0.288109595976299,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,2.32140586367385,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0.150257608997218,0,0,0,0.322231671127465,0,0,0,0,0.336749488765919,0,0.385239660814607,0.643324774124777,0,0,0.463044948647668,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0.115525666150338,0,0.690359926060101,0,0,0,0,0,0.327543835020193,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0.118193840883968,0.222462803784138,0,0,0.560544326627578,0,0.215927591218621,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0.691259661814092,0,0.236664001461131,0,0,0.22910686854405,0.31020638566432,0,0.223710863595585,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0.352894871715692,0.320965466756673,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.248298857183432,0,0,0,0,0,0.0673520530145875,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:145013517..145013546,+ | |short_description=p@chr8:145013517..145013546,+ | ||
}} | }} |
Latest revision as of 16:00, 31 July 2015
Short description: | p@chr8:145013517..145013546, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:145013517..145013546, + |
Coexpression cluster: | C578_CD34_Natural_CD8_CD4_CD133_Basophils_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 2.33e-08 | 1 |