FFCP PHASE1:Hg19::chr8:15939682..15939688,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:15939682..15939688,+ | |||
|coexpression_cluster_id=C312 | |coexpression_cluster_id=C312 | ||
|description=CAGE_peak_at_chr8:15939682..15939688,+ | |description=CAGE_peak_at_chr8:15939682..15939688,+ | ||
|id=chr8:15939682..15939688,+ | |id=chr8:15939682..15939688,+ | ||
|ontology_enrichment_celltype=CL:1000415!6.43e-14!2;CL:0000054!7.30e-14!2;CL:0000137!7.30e-14!2;CL:0000092!7.30e-14!2;CL:0000243!9.65e-07!15;CL:0000125!9.65e-07!15;CL:0000030!9.65e-07!15;CL:0000339!9.65e-07!15 | |ontology_enrichment_celltype=CL:1000415!6.43e-14!2;CL:0000054!7.30e-14!2;CL:0000137!7.30e-14!2;CL:0000092!7.30e-14!2;CL:0000243!9.65e-07!15;CL:0000125!9.65e-07!15;CL:0000030!9.65e-07!15;CL:0000339!9.65e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000054;4.27e-34;2!CL:0000137;4.27e-34;2!CL:0000092;4.27e-34;2!CL:1000415;4.27e-34;2!CL:0002092;5.93e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,3.61e-34,2;CL:0000054,5.04e-34,2;CL:0000137,5.04e-34,2;CL:0000092,5.04e-34,2;CL:0002092,6.13e-08,10;CL:0000062,2.47e-07,11;CL:0000375,2.47e-07,11;CL:0000335,2.47e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0003918;6.56e-08;10!UBERON:0007687;6.56e-08;10!CL:0000335;2.40e-07;11 | |||
|ontology_enrichment_disease=DOID:0060085!2.78e-26!1;DOID:3165!2.78e-26!1;DOID:0060121!2.78e-26!1;DOID:2438!2.78e-26!1;DOID:4418!2.78e-26!1;DOID:200!7.30e-14!2;DOID:4305!7.30e-14!2;DOID:3093!3.55e-09!11;DOID:0060072!1.40e-07!4 | |ontology_enrichment_disease=DOID:0060085!2.78e-26!1;DOID:3165!2.78e-26!1;DOID:0060121!2.78e-26!1;DOID:2438!2.78e-26!1;DOID:4418!2.78e-26!1;DOID:200!7.30e-14!2;DOID:4305!7.30e-14!2;DOID:3093!3.55e-09!11;DOID:0060072!1.40e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:0060085;1.71e-66;1!DOID:3165;1.71e-66;1!DOID:0060121;1.71e-66;1!DOID:2438;1.71e-66;1!DOID:4418;1.71e-66;1!DOID:200;4.27e-34;2!DOID:4305;4.27e-34;2!DOID:0060072;8.00e-18;4!DOID:201;2.31e-12;6!DOID:0060100;2.31e-12;6!DOID:7;8.05e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,2.39e-66,1;DOID:3165,2.39e-66,1;DOID:0060121,2.39e-66,1;DOID:2438,2.39e-66,1;DOID:4418,2.39e-66,1;DOID:200,5.04e-34,2;DOID:4305,5.04e-34,2;DOID:0060072,8.69e-18,4;DOID:201,2.45e-12,6;DOID:0060100,2.45e-12,6;DOID:7,7.07e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002110!1.01e-09!3;UBERON:0006242!1.01e-09!3;UBERON:0000014!1.40e-07!4 | |ontology_enrichment_uberon=UBERON:0002110!1.01e-09!3;UBERON:0006242!1.01e-09!3;UBERON:0000014!1.40e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002110;2.93e-23;3!UBERON:0000014;8.00e-18;4!UBERON:0002294;8.57e-11;7!UBERON:0001173;8.57e-11;7!UBERON:0002371;7.70e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,2.62e-23,3;UBERON:0006242,2.62e-23,3;UBERON:0000014,8.69e-18,4;UBERON:0002294,1.04e-08,9;UBERON:0001173,1.04e-08,9;UBERON:0004912,1.04e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17300684576278,0,0,4.80952921509202,0,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51149313853035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17300684576278,0,0,4.80952921509202,0,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51149313853035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:15939682..15939688,+ | |short_description=p@chr8:15939682..15939688,+ | ||
}} | }} |
Latest revision as of 16:18, 31 July 2015
Short description: | p@chr8:15939682..15939688, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:15939682..15939688, + |
Coexpression cluster: | C312_gall_squamous_small_chronic_thyroid_cholangiocellular_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 3.61e-34 | 2 |
bone matrix secreting cell | 5.04e-34 | 2 |
osteocyte | 5.04e-34 | 2 |
osteoclast | 5.04e-34 | 2 |
bone marrow cell | 6.13e-08 | 10 |
osteoblast | 2.47e-07 | 11 |
osteoprogenitor cell | 2.47e-07 | 11 |
mesenchyme condensation cell | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 2.62e-23 | 3 |
gall bladder primordium | 2.62e-23 | 3 |
zone of skin | 8.69e-18 | 4 |
biliary system | 1.04e-08 | 9 |
biliary tree | 1.04e-08 | 9 |
biliary bud | 1.04e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 2.39e-66 | 1 |
skin benign neoplasm | 2.39e-66 | 1 |
integumentary system benign neoplasm | 2.39e-66 | 1 |
dermis tumor | 2.39e-66 | 1 |
cutaneous fibrous histiocytoma | 2.39e-66 | 1 |
giant cell tumor | 5.04e-34 | 2 |
bone giant cell tumor | 5.04e-34 | 2 |
benign neoplasm | 8.69e-18 | 4 |
connective tissue cancer | 2.45e-12 | 6 |
musculoskeletal system cancer | 2.45e-12 | 6 |
disease of anatomical entity | 7.07e-08 | 39 |