FFCP PHASE1:Hg19::chr8:27252724..27252729,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:27252724..27252729,- | |||
|coexpression_cluster_id=C1734 | |||
|description=CAGE_peak_at_chr8:27252724..27252729,- | |description=CAGE_peak_at_chr8:27252724..27252729,- | ||
|id=chr8:27252724..27252729,- | |id=chr8:27252724..27252729,- | ||
|ontology_enrichment_celltype=CL:0002057!3.07e-45!42;CL:0000860!6.38e-42!45;CL:0000738!1.05e-38!140;CL:0000766!6.27e-37!76;CL:0002009!8.55e-37!65;CL:0000557!1.87e-36!71;CL:0002194!3.60e-31!63;CL:0000576!3.60e-31!63;CL:0000040!3.60e-31!63;CL:0000559!3.60e-31!63;CL:0000839!1.62e-30!70;CL:0000037!2.72e-30!172;CL:0000566!2.72e-30!172;CL:0002087!2.92e-30!119;CL:0002031!5.14e-29!124;CL:0000988!2.90e-28!182;CL:0000763!5.32e-28!112;CL:0000049!5.32e-28!112;CL:0002032!7.25e-26!165;CL:0000837!7.25e-26!165;CL:0002393!1.92e-20!9;CL:0002397!1.92e-20!9;CL:0000767!5.85e-17!3;CL:0000623!8.96e-17!3;CL:0000825!8.96e-17!3;CL:0000842!1.09e-15!3;CL:0001014!5.75e-12!2;CL:0001016!5.75e-12!2;CL:0000224!6.68e-12!4;CL:0000134!5.28e-11!358;CL:0002320!1.17e-10!365;CL:0000219!1.94e-09!390;CL:0000048!8.94e-09!430;CL:0000723!1.48e-08!436;CL:0000840!1.65e-08!5;CL:0001029!1.65e-08!5;CL:0000034!2.85e-08!444;CL:0000080!4.29e-08!6 | |ontology_enrichment_celltype=CL:0002057!3.07e-45!42;CL:0000860!6.38e-42!45;CL:0000738!1.05e-38!140;CL:0000766!6.27e-37!76;CL:0002009!8.55e-37!65;CL:0000557!1.87e-36!71;CL:0002194!3.60e-31!63;CL:0000576!3.60e-31!63;CL:0000040!3.60e-31!63;CL:0000559!3.60e-31!63;CL:0000839!1.62e-30!70;CL:0000037!2.72e-30!172;CL:0000566!2.72e-30!172;CL:0002087!2.92e-30!119;CL:0002031!5.14e-29!124;CL:0000988!2.90e-28!182;CL:0000763!5.32e-28!112;CL:0000049!5.32e-28!112;CL:0002032!7.25e-26!165;CL:0000837!7.25e-26!165;CL:0002393!1.92e-20!9;CL:0002397!1.92e-20!9;CL:0000767!5.85e-17!3;CL:0000623!8.96e-17!3;CL:0000825!8.96e-17!3;CL:0000842!1.09e-15!3;CL:0001014!5.75e-12!2;CL:0001016!5.75e-12!2;CL:0000224!6.68e-12!4;CL:0000134!5.28e-11!358;CL:0002320!1.17e-10!365;CL:0000219!1.94e-09!390;CL:0000048!8.94e-09!430;CL:0000723!1.48e-08!436;CL:0000840!1.65e-08!5;CL:0001029!1.65e-08!5;CL:0000034!2.85e-08!444;CL:0000080!4.29e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002393;4.58e-30;6!CL:0002397;4.58e-30;6!CL:0000767;1.39e-27;3!CL:0001014;2.02e-11;2!CL:0001016;2.02e-11;2!CL:0000094;5.41e-11;8!CL:0000766;3.75e-10;69!CL:0000576;4.45e-09;48!CL:0000081;3.03e-08;11!CL:0000623;7.50e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,1.59e-27,3;CL:0002393,2.41e-20,9;CL:0002397,2.41e-20,9;CL:0000766,5.12e-17,72;CL:0000860,7.35e-17,42;CL:0002057,7.35e-17,42;CL:0002009,1.94e-15,61;CL:0000473,9.44e-15,48;CL:0000234,9.44e-15,48;CL:0000763,2.43e-14,108;CL:0000049,2.43e-14,108;CL:0000557,4.64e-14,67;CL:0000738,4.83e-14,136;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0002194,8.60e-12,59;CL:0000576,8.60e-12,59;CL:0000040,8.60e-12,59;CL:0000559,8.60e-12,59;CL:0001014,1.82e-11,2;CL:0001016,1.82e-11,2;CL:0000037,2.70e-11,168;CL:0000094,5.69e-11,8;CL:0000988,1.07e-10,177;CL:0000839,1.50e-10,66;CL:0002031,3.97e-10,120;CL:0000081,3.14e-08,11;CL:0002087,4.23e-08,115;CL:0000623,6.78e-08,3;CL:0000825,6.78e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.92e-14;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.76e-33!102;UBERON:0003061!1.76e-33!102;UBERON:0002371!8.25e-32!80;UBERON:0002193!5.49e-30!112;UBERON:0001474!3.01e-29!86;UBERON:0004765!3.68e-24!101;UBERON:0001434!3.68e-24!101;UBERON:0002405!1.56e-22!115;UBERON:0003081!6.11e-14!216;UBERON:0002204!6.64e-14!167;UBERON:0002384!3.46e-10!375 | |ontology_enrichment_uberon=UBERON:0002390!1.76e-33!102;UBERON:0003061!1.76e-33!102;UBERON:0002371!8.25e-32!80;UBERON:0002193!5.49e-30!112;UBERON:0001474!3.01e-29!86;UBERON:0004765!3.68e-24!101;UBERON:0001434!3.68e-24!101;UBERON:0002405!1.56e-22!115;UBERON:0003081!6.11e-14!216;UBERON:0002204!6.64e-14!167;UBERON:0002384!3.46e-10!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.16e-12,76;UBERON:0001474,1.77e-11,82;UBERON:0004765,1.90e-10,90;UBERON:0002405,4.19e-10,93;UBERON:0002390,1.40e-09,98;UBERON:0003061,1.40e-09,98;UBERON:0001434,2.20e-09,100;UBERON:0002193,1.13e-08,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,2.68680578668049,3.40595471295367,0,0,0,0,0,0,2.76997704265939,1.40381113229099,1.73608696572681,0,0,0,0.290796477559129,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0.28769239232215,0,0,3.44745680736619,2.5819387343353,1.35426486594342,0,0,0.449446968890169,0.306083892370903,0,0,0.329851300186716,0,0,0,0,0,0.502497330513487,0,0.868755378820466,0,0,0.632924774881769,0,0.425208599930087,0.209658645508376,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97030760201927,0.431255149719035,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,3.86900977278975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,2.68680578668049,3.40595471295367,0,0,0,0,0,0,2.76997704265939,1.40381113229099,1.73608696572681,0,0,0,0.290796477559129,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0.28769239232215,0,0,3.44745680736619,2.5819387343353,1.35426486594342,0,0,0.449446968890169,0.306083892370903,0,0,0.329851300186716,0,0,0,0,0,0.502497330513487,0,0.868755378820466,0,0,0.632924774881769,0,0.425208599930087,0.209658645508376,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97030760201927,0.431255149719035,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,3.86900977278975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:27252724..27252729,- | |short_description=p@chr8:27252724..27252729,- | ||
}} | }} |
Latest revision as of 17:32, 31 July 2015
Short description: | p@chr8:27252724..27252729, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:27252724..27252729, - |
Coexpression cluster: | C1734_immature_Basophils_CD14_Mast_Natural_CD34_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.16e-12 | 76 |
bone element | 1.77e-11 | 82 |
skeletal element | 1.90e-10 | 90 |
immune system | 4.19e-10 | 93 |
hematopoietic system | 1.40e-09 | 98 |
blood island | 1.40e-09 | 98 |
skeletal system | 2.20e-09 | 100 |
hemolymphoid system | 1.13e-08 | 108 |