FFCP PHASE1:Hg19::chr8:37554250..37554295,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:37554250..37554295,+ | |||
|description=CAGE_peak_at_chr8:37554250..37554295,+ | |description=CAGE_peak_at_chr8:37554250..37554295,+ | ||
|id=chr8:37554250..37554295,+ | |id=chr8:37554250..37554295,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.28e-34!180;CL:0000057!1.87e-15!75;CL:0000183!4.55e-15!59;CL:0000187!2.01e-13!54;CL:0000680!2.16e-13!57;CL:0000056!2.16e-13!57;CL:0000355!2.16e-13!57;CL:0000393!1.47e-11!60;CL:0000211!1.47e-11!60;CL:0000192!8.39e-11!42;CL:0000514!8.39e-11!42;CL:0000220!1.22e-09!246;CL:0002321!3.06e-09!248;CL:0000222!2.42e-08!119;CL:0000359!8.45e-08!32 | |ontology_enrichment_celltype=CL:0000055!7.28e-34!180;CL:0000057!1.87e-15!75;CL:0000183!4.55e-15!59;CL:0000187!2.01e-13!54;CL:0000680!2.16e-13!57;CL:0000056!2.16e-13!57;CL:0000355!2.16e-13!57;CL:0000393!1.47e-11!60;CL:0000211!1.47e-11!60;CL:0000192!8.39e-11!42;CL:0000514!8.39e-11!42;CL:0000220!1.22e-09!246;CL:0002321!3.06e-09!248;CL:0000222!2.42e-08!119;CL:0000359!8.45e-08!32 | ||
|ontology_enrichment_celltype_v019=CL:0000192;3.17e-09;43!CL:0000187;5.51e-09;55!CL:0000359;3.30e-08;32!CL:0000243;1.87e-07;15!CL:0000125;1.87e-07;15!CL:0000057;1.87e-07;73!CL:0000393;2.36e-07;61!CL:0000211;2.36e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.57e-17,76;CL:0000187,4.46e-15,55;CL:0000680,1.31e-14,58;CL:0000056,1.31e-14,58;CL:0000355,1.31e-14,58;CL:0000393,8.79e-13,61;CL:0000211,8.79e-13,61;CL:0000192,5.36e-12,43;CL:0000514,5.36e-12,43;CL:0000359,2.60e-08,32;CL:0000222,4.55e-08,121;CL:0000243,5.73e-07,15;CL:0000125,5.73e-07,15;CL:0000030,5.73e-07,15;CL:0000339,5.73e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;3.17e-09;43!CL:0000355;3.64e-08;58!CL:0000339;1.87e-07;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.19e-19!365;UBERON:0000914!3.41e-16!83;UBERON:0002329!3.41e-16!83;UBERON:0003077!3.41e-16!83;UBERON:0003059!3.41e-16!83;UBERON:0007282!3.41e-16!83;UBERON:0009618!3.41e-16!83;UBERON:0007285!3.41e-16!83;UBERON:0005256!4.61e-16!143;UBERON:0000481!1.51e-15!347;UBERON:0000486!2.64e-15!82;UBERON:0004290!7.97e-15!70;UBERON:0002100!2.59e-14!216;UBERON:0003104!3.96e-14!238;UBERON:0009142!3.96e-14!238;UBERON:0002385!7.29e-14!63;UBERON:0001015!7.29e-14!63;UBERON:0000383!7.29e-14!63;UBERON:0001134!1.02e-13!61;UBERON:0002036!1.02e-13!61;UBERON:0003082!1.02e-13!61;UBERON:0000468!2.47e-13!659;UBERON:0000119!2.11e-10!312;UBERON:0000483!5.39e-10!309;UBERON:0002050!2.53e-09!605;UBERON:0005423!2.53e-09!605;UBERON:0000923!3.48e-09!604;UBERON:0005291!3.48e-09!604;UBERON:0006598!3.48e-09!604;UBERON:0002532!3.48e-09!604;UBERON:0000922!3.53e-09!612;UBERON:0000467!3.76e-08!625;UBERON:0000480!5.97e-08!626;UBERON:0003102!6.39e-08!95 | |ontology_enrichment_uberon=UBERON:0000475!7.19e-19!365;UBERON:0000914!3.41e-16!83;UBERON:0002329!3.41e-16!83;UBERON:0003077!3.41e-16!83;UBERON:0003059!3.41e-16!83;UBERON:0007282!3.41e-16!83;UBERON:0009618!3.41e-16!83;UBERON:0007285!3.41e-16!83;UBERON:0005256!4.61e-16!143;UBERON:0000481!1.51e-15!347;UBERON:0000486!2.64e-15!82;UBERON:0004290!7.97e-15!70;UBERON:0002100!2.59e-14!216;UBERON:0003104!3.96e-14!238;UBERON:0009142!3.96e-14!238;UBERON:0002385!7.29e-14!63;UBERON:0001015!7.29e-14!63;UBERON:0000383!7.29e-14!63;UBERON:0001134!1.02e-13!61;UBERON:0002036!1.02e-13!61;UBERON:0003082!1.02e-13!61;UBERON:0000468!2.47e-13!659;UBERON:0000119!2.11e-10!312;UBERON:0000483!5.39e-10!309;UBERON:0002050!2.53e-09!605;UBERON:0005423!2.53e-09!605;UBERON:0000923!3.48e-09!604;UBERON:0005291!3.48e-09!604;UBERON:0006598!3.48e-09!604;UBERON:0002532!3.48e-09!604;UBERON:0000922!3.53e-09!612;UBERON:0000467!3.76e-08!625;UBERON:0000480!5.97e-08!626;UBERON:0003102!6.39e-08!95 | ||
|ontology_enrichment_uberon_v019= | |||
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|phase1_expression=1.81678379270557,1.71280419112787,1.83240725324762,0,1.34088328328186,2.61701557230111,0,3.15859936713415,2.61185628199839,0.491467873003018,1.39560233594486,1.74753097704138,1.84636884759917,2.22779435328084,0.994192127183747,4.70627602516243,3.01347264011988,4.38186054232424,0.487932798790507,2.70866327768933,3.26401105990805,1.56727360739044,2.0036519099174,4.92747930262383,4.6450776650077,0,0,0,0,0,0.154816123316076,0,1.50602959389125,1.84877005083394,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0.257575567634187,0.145398238779565,0.377875943688809,0,0,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.598390972864896,0,0,0,0,0,0,0,0,0,0,0,0.425208599930087,0,0.22465726229299,0.150176892841506,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,1.40648818027883,0.722878304769133,2.00535164254356,1.88300474649071,0,4.37971383272372,1.98523116044542,1.99556457716308,1.49319135678314,0.982343066232845,2.18577172975525,2.22470665670658,0.324547393654683,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0,0,0,0.835979866147242,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0.267899184852239,0,0.450445921933289,3.06633274931766,0,0.732806975721629,0,0,0.872188104285069,1.98788780678127,2.78587125662075,2.51577443545116,4.30254931123221,2.83734705758686,1.12135520028461,3.20246987189115,2.22000793575444,1.8672662123986,0.538842688278752,1.30769522490767,1.81628913173918,2.88087962239999,1.87457145467037,2.49728061464256,0.570471821544449,1.64393548606981,3.17073146338165,2.10434827678571,2.80901613404497,1.22492502752936,1.84251475967652,2.9964476540972,7.12801714369232,1.23633464639278,5.46096817162816,5.74894513452991,1.34668891163253,4.50426671539071,2.49357703935765,5.26773145057006,1.5324389789951,3.30523729594513,1.47461838108027,3.58779271377724,1.2813443329114,1.69545520927649,2.40072876867522,1.75189299705346,3.34932702059318,2.97786970130544,1.85653965465393,2.24105111870757,3.78650661366172,2.48534726334208,2.58633690910099,3.90510551768276,1.91428986632517,1.86516651541536,0,0,0.860413786167011,0,0.132529768321485,0.580969714347592,1.14027160516907,0.756962552626885,0,0,1.92972281457866,4.14404764057442,1.85747171212792,0.721879481669586,1.65629520055781,1.34867752062481,1.20505514941741,1.43382164552112,0.653638332277218,1.42362371466658,1.75280700608214,0.588664395376038,1.15424147083917,0,5.60967095213783,6.173610169971,5.88034845542168,0,0,0,0,0.368965315629341,1.02940686179115,0.329250856225877,0,0.904760751704678,2.12953423864618,1.62904152655162,3.11980435583874,2.88662684050547,2.20267769452646,3.87448690978212,0.144366447761074,0,0,7.90204397959275,4.29243081047436,0,0,0.148631162288728,0.93733833986777,0.839910640994298,0.567100388969546,0.626909658919938,1.74380363108377,2.68367875415648,0,0,0,0,0.12624243342638,1.20645999155121,2.29193055334967,0,3.4214489204541,0.514137463516618,1.8020583470635,1.14330573052231,2.80327710863402,1.30788020649984,1.54010400223995,2.19761916788222,14.3062578340753,1.690605505112,6.64845291462176,1.04007436911366,3.34369586540785,7.09245660116391,5.06202140130589,3.57444984145369,4.88359444852299,3.29296134712308,0.65147236858747,2.84313558994037,0.791951872933429,1.80863626235752,2.61460037580088,1.3996218765488,0,0,2.10833939483032,0.718874566474748,2.29723871668228,1.42636905040718,0.868687840005475,1.43833425785268,1.43248770591916,0,0,0,0.128343036279748,2.54094624222463,0,0.773288812777695,1.17261385734044,1.27587750330633,0,0,0,3.80343624329334,4.00136416847742,1.62759014219841,1.87173775377726,1.07057393278297,0.630809660135739,3.04567678981054,2.40756879782175,0,2.0694614258501,3.98535359121262,3.13427586520895,2.78027566297865,2.93701736194111,5.49029478097369,0,0.647142602455851,0,0.909382714338778,0,3.0239029332968,1.24053903909388,2.76231551918512,2.24528075546459,1.53766979106841,1.53512174720011,2.57366273829772,1.48418066444991,3.08419387605311,2.13074070375753,3.03870477251094,3.11552657510173,1.62694529843943,0.120859449591622,0.802025881213139,0.644566922551274,2.52591785962135,3.64182336013434,2.75361271414791,1.35359883872224,0.616122696835318,9.41219723012226,0,1.37217117560738,0,0.510281115829547,0.863663664408557,4.62681758070868,3.52230368807009,7.5253466078228,1.52925763827023,0.831076008928724,4.25362033972139,0,0,1.02580050046556,3.93617574839647,0.650756789328606,1.23649213977267,0.915694648183434,0.330037999682352,3.44559322797703,0,1.6068392984416,2.61010939388729,2.31072925671967,1.22802939780904,3.03240459465967,3.6522883255213,2.61030049045611,2.21589231281862,2.67096106940212,1.65284915360978,2.11409074101617,1.65896526242959,0.50578890427775,2.78907329578371,4.7221852024596,2.7881490806424,2.7723022215848,2.12922412126809,3.47973196830029,2.59453906745488,0,0.372158369359667,0.632758849437452,1.14378116354295,4.09436466098134,3.4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| ||
|short_description=p@chr8:37554250..37554295,+ | |short_description=p@chr8:37554250..37554295,+ | ||
}} | }} |
Latest revision as of 18:05, 31 July 2015
Short description: | p@chr8:37554250..37554295, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:37554250..37554295, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.57e-17 | 76 |
muscle cell | 4.46e-15 | 55 |
muscle precursor cell | 1.31e-14 | 58 |
myoblast | 1.31e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.31e-14 | 58 |
electrically responsive cell | 8.79e-13 | 61 |
electrically active cell | 8.79e-13 | 61 |
smooth muscle cell | 5.36e-12 | 43 |
smooth muscle myoblast | 5.36e-12 | 43 |
vascular associated smooth muscle cell | 2.60e-08 | 32 |
mesodermal cell | 4.55e-08 | 121 |
glial cell (sensu Vertebrata) | 5.73e-07 | 15 |
glial cell | 5.73e-07 | 15 |
glioblast | 5.73e-07 | 15 |
glioblast (sensu Vertebrata) | 5.73e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 6.38e-16 | 83 |
epithelial vesicle | 1.22e-15 | 78 |
somite | 1.79e-15 | 71 |
presomitic mesoderm | 1.79e-15 | 71 |
presumptive segmental plate | 1.79e-15 | 71 |
dermomyotome | 1.79e-15 | 71 |
trunk paraxial mesoderm | 1.79e-15 | 71 |
dense mesenchyme tissue | 5.11e-15 | 73 |
paraxial mesoderm | 6.02e-15 | 72 |
presumptive paraxial mesoderm | 6.02e-15 | 72 |
muscle tissue | 2.12e-14 | 64 |
musculature | 2.12e-14 | 64 |
musculature of body | 2.12e-14 | 64 |
skeletal muscle tissue | 3.25e-14 | 62 |
striated muscle tissue | 3.25e-14 | 62 |
myotome | 3.25e-14 | 62 |
mesenchyme | 4.30e-13 | 160 |
entire embryonic mesenchyme | 4.30e-13 | 160 |
trunk mesenchyme | 1.85e-12 | 122 |
trunk | 5.06e-11 | 199 |
unilaminar epithelium | 5.61e-07 | 148 |
face | 8.70e-07 | 22 |