FFCP PHASE1:Hg19::chr8:49783129..49783154,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:49783129..49783154,+ | |||
|coexpression_cluster_id=C1021 | |||
|description=CAGE_peak_at_chr8:49783129..49783154,+ | |description=CAGE_peak_at_chr8:49783129..49783154,+ | ||
|id=chr8:49783129..49783154,+ | |id=chr8:49783129..49783154,+ | ||
|ontology_enrichment_celltype=CL:0002368!5.50e-30!13;CL:0002076!1.28e-29!43;CL:0002159!1.84e-24!13;CL:0000223!2.65e-20!59;CL:0000244!4.89e-17!4;CL:0000731!4.89e-17!4;CL:0000066!1.06e-16!254;CL:0002202!2.16e-16!9;CL:0002632!2.16e-16!9;CL:0002621!9.38e-14!3;CL:0002328!1.55e-13!3;CL:0002166!3.25e-13!3;CL:0000068!3.82e-13!3;CL:0000069!3.82e-13!3;CL:0000307!3.82e-13!3;CL:0000377!3.82e-13!3;CL:0000240!2.89e-11!6;CL:0000311!2.89e-11!6;CL:0000079!2.89e-11!6;CL:0000237!2.89e-11!6;CL:0000036!2.89e-11!6;CL:0000357!2.89e-11!6;CL:0000114!2.89e-11!6;CL:0002251!5.47e-11!21;CL:0000076!2.35e-09!62;CL:0000575!4.66e-09!2;CL:0000362!1.14e-08!8;CL:0002077!1.32e-08!33;CL:0000220!2.06e-08!246;CL:0002321!2.73e-08!248;CL:0000312!2.99e-08!5 | |ontology_enrichment_celltype=CL:0002368!5.50e-30!13;CL:0002076!1.28e-29!43;CL:0002159!1.84e-24!13;CL:0000223!2.65e-20!59;CL:0000244!4.89e-17!4;CL:0000731!4.89e-17!4;CL:0000066!1.06e-16!254;CL:0002202!2.16e-16!9;CL:0002632!2.16e-16!9;CL:0002621!9.38e-14!3;CL:0002328!1.55e-13!3;CL:0002166!3.25e-13!3;CL:0000068!3.82e-13!3;CL:0000069!3.82e-13!3;CL:0000307!3.82e-13!3;CL:0000377!3.82e-13!3;CL:0000240!2.89e-11!6;CL:0000311!2.89e-11!6;CL:0000079!2.89e-11!6;CL:0000237!2.89e-11!6;CL:0000036!2.89e-11!6;CL:0000357!2.89e-11!6;CL:0000114!2.89e-11!6;CL:0002251!5.47e-11!21;CL:0000076!2.35e-09!62;CL:0000575!4.66e-09!2;CL:0000362!1.14e-08!8;CL:0002077!1.32e-08!33;CL:0000220!2.06e-08!246;CL:0002321!2.73e-08!248;CL:0000312!2.99e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002159;8.10e-40;14!CL:0002621;1.56e-28;3!CL:0002166;2.69e-27;3!CL:0000307;2.69e-27;3!CL:0002202;2.86e-25;9!CL:0002632;2.86e-25;9!CL:0002368;5.33e-25;13!CL:0000244;3.76e-21;4!CL:0000731;3.76e-21;4!CL:0000312;5.16e-17;5!CL:0000362;2.35e-16;9!CL:0002076;4.30e-16;42!CL:0002077;1.78e-14;34!CL:0000240;2.81e-14;6!CL:0000311;2.81e-14;6!CL:0000079;2.81e-14;6!CL:0000237;2.81e-14;6!CL:0002328;1.17e-13;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,7.12e-40,14;CL:0002621,1.56e-28,3;CL:0002166,2.46e-27,3;CL:0000068,3.53e-27,3;CL:0000069,3.53e-27,3;CL:0000307,3.53e-27,3;CL:0000377,3.53e-27,3;CL:0002202,3.33e-25,9;CL:0002632,3.33e-25,9;CL:0002368,6.04e-25,13;CL:0000244,4.62e-21,4;CL:0000731,4.62e-21,4;CL:0002076,2.46e-20,42;CL:0000312,5.02e-17,5;CL:0000362,2.26e-16,9;CL:0002077,6.84e-16,34;CL:0000223,2.57e-14,58;CL:0000066,2.64e-14,253;CL:0000240,2.74e-14,6;CL:0000311,2.74e-14,6;CL:0000079,2.74e-14,6;CL:0000237,2.74e-14,6;CL:0000036,2.74e-14,6;CL:0000357,2.74e-14,6;CL:0000114,2.74e-14,6;CL:0002328,1.17e-13,3;CL:0002321,9.02e-09,250;CL:0000221,9.08e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000377;2.69e-27;3!CL:0000357;2.81e-14;6!CL:0000114;2.81e-14;6!CL:0000223;5.51e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!9.38e-14!3;UBERON:0000365!1.20e-13!5;UBERON:0004815!1.55e-13!3;UBERON:0002031!1.55e-13!3;UBERON:0001004!2.95e-12!72;UBERON:0005910!2.22e-11!6;UBERON:0007196!2.74e-10!14;UBERON:0001558!2.74e-10!14;UBERON:0002185!2.94e-10!4;UBERON:0001708!5.09e-10!4;UBERON:0001704!5.09e-10!4;UBERON:0004119!5.50e-08!169;UBERON:0000925!5.50e-08!169;UBERON:0006595!5.50e-08!169;UBERON:0003729!2.15e-07!5;UBERON:0000065!4.39e-07!53;UBERON:0002090!8.35e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.56e-28;3!UBERON:0000486;3.29e-27;12!UBERON:0001708;1.20e-20;4!UBERON:0008895;1.20e-20;4!UBERON:0000365;4.76e-17;5!UBERON:0011159;1.20e-16;5!UBERON:0007196;3.85e-15;15!UBERON:0001558;3.85e-15;15!UBERON:0005910;2.62e-14;6!UBERON:0004815;1.17e-13;3!UBERON:0002031;1.17e-13;3!UBERON:0005911;1.42e-13;36!UBERON:0010371;1.59e-13;31!UBERON:0003929;1.40e-12;7!UBERON:0003126;4.63e-12;7!UBERON:0001005;4.63e-12;7!UBERON:0003350;4.47e-11;8!UBERON:0001828;4.47e-11;8!UBERON:0004807;1.49e-10;22!UBERON:0001003;6.74e-10;15!UBERON:0007376;6.74e-10;15!UBERON:0002185;1.52e-08;5!UBERON:0011137;7.29e-08;11!UBERON:0010323;7.29e-08;11!UBERON:0003729;5.35e-07;13!UBERON:0005178;8.01e-07;34!UBERON:0002224;8.01e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.56e-28,3;UBERON:0001708,1.12e-20,4;UBERON:0008895,1.12e-20,4;UBERON:0000365,5.60e-17,5;UBERON:0011159,1.14e-16,5;UBERON:0007196,4.21e-15,15;UBERON:0001558,4.21e-15,15;UBERON:0005910,3.00e-14,6;UBERON:0010188,5.40e-14,6;UBERON:0002539,5.40e-14,6;UBERON:0008816,5.40e-14,6;UBERON:0004815,1.17e-13,3;UBERON:0002031,1.17e-13,3;UBERON:0003126,5.19e-12,7;UBERON:0001005,5.19e-12,7;UBERON:0003102,3.28e-11,99;UBERON:0003350,4.47e-11,8;UBERON:0001828,4.47e-11,8;UBERON:0001003,6.58e-10,15;UBERON:0007376,6.58e-10,15;UBERON:0007383,6.58e-10,15;UBERON:0001004,8.20e-09,74;UBERON:0002185,1.52e-08,5;UBERON:0004807,2.97e-08,28;UBERON:0010323,7.12e-08,11;UBERON:0005911,7.56e-08,82;UBERON:0004119,1.89e-07,160;UBERON:0000925,1.89e-07,160;UBERON:0006595,1.89e-07,160;UBERON:0000033,3.29e-07,56;UBERON:0003729,5.35e-07,13 | |||
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| ||
|short_description=p@chr8:49783129..49783154,+ | |short_description=p@chr8:49783129..49783154,+ | ||
}} | }} |
Latest revision as of 18:45, 31 July 2015
Short description: | p@chr8:49783129..49783154, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:49783129..49783154, + |
Coexpression cluster: | C1021_Small_Bronchial_Tracheal_Mallassezderived_Gingival_Sebocyte_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 7.12e-40 | 14 |
gingival epithelial cell | 1.56e-28 | 3 |
epithelial cell of Malassez | 2.46e-27 | 3 |
duct epithelial cell | 3.53e-27 | 3 |
branched duct epithelial cell | 3.53e-27 | 3 |
tracheal epithelial cell | 3.53e-27 | 3 |
tracheoblast | 3.53e-27 | 3 |
epithelial cell of tracheobronchial tree | 3.33e-25 | 9 |
epithelial cell of lower respiratory tract | 3.33e-25 | 9 |
respiratory epithelial cell | 6.04e-25 | 13 |
transitional epithelial cell | 4.62e-21 | 4 |
urothelial cell | 4.62e-21 | 4 |
endo-epithelial cell | 2.46e-20 | 42 |
keratinocyte | 5.02e-17 | 5 |
epidermal cell | 2.26e-16 | 9 |
ecto-epithelial cell | 6.84e-16 | 34 |
endodermal cell | 2.57e-14 | 58 |
epithelial cell | 2.64e-14 | 253 |
stratified squamous epithelial cell | 2.74e-14 | 6 |
keratin accumulating cell | 2.74e-14 | 6 |
stratified epithelial cell | 2.74e-14 | 6 |
keratinizing barrier epithelial cell | 2.74e-14 | 6 |
epithelial fate stem cell | 2.74e-14 | 6 |
stratified epithelial stem cell | 2.74e-14 | 6 |
surface ectodermal cell | 2.74e-14 | 6 |
bronchial epithelial cell | 1.17e-13 | 3 |
embryonic cell | 9.02e-09 | 250 |
ectodermal cell | 9.08e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.56e-28 | 3 |
jaw skeleton | 1.12e-20 | 4 |
splanchnocranium | 1.12e-20 | 4 |
urothelium | 5.60e-17 | 5 |
primary subdivision of cranial skeletal system | 1.14e-16 | 5 |
tracheobronchial tree | 4.21e-15 | 15 |
lower respiratory tract | 4.21e-15 | 15 |
transitional epithelium | 3.00e-14 | 6 |
protuberance | 5.40e-14 | 6 |
pharyngeal arch | 5.40e-14 | 6 |
embryonic head | 5.40e-14 | 6 |
lower respiratory tract epithelium | 1.17e-13 | 3 |
epithelium of bronchus | 1.17e-13 | 3 |
trachea | 5.19e-12 | 7 |
respiratory airway | 5.19e-12 | 7 |
surface structure | 3.28e-11 | 99 |
epithelium of mucosa | 4.47e-11 | 8 |
gingiva | 4.47e-11 | 8 |
skin epidermis | 6.58e-10 | 15 |
outer epithelium | 6.58e-10 | 15 |
enveloping layer of ectoderm | 6.58e-10 | 15 |
respiratory system | 8.20e-09 | 74 |
bronchus | 1.52e-08 | 5 |
respiratory system epithelium | 2.97e-08 | 28 |
cranial skeletal system | 7.12e-08 | 11 |
endo-epithelium | 7.56e-08 | 82 |
endoderm-derived structure | 1.89e-07 | 160 |
endoderm | 1.89e-07 | 160 |
presumptive endoderm | 1.89e-07 | 160 |
head | 3.29e-07 | 56 |
mouth mucosa | 5.35e-07 | 13 |