FFCP PHASE1:Hg19::chr9:107545436..107545476,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:107545436..107545476,-
|short_description=p@chr9:107545436..107545476,-
|description=CAGE_peak_at_chr9:107545436..107545476,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:107545436..107545476,- | |||
|description=CAGE_peak_at_chr9:107545436..107545476,- | |||
|id=chr9:107545436..107545476,- | |||
|ontology_enrichment_celltype=CL:0002057!1.43e-14!42;CL:0000557!5.47e-14!71;CL:0000839!2.30e-13!70;CL:0002009!6.84e-13!65;CL:0000860!7.69e-13!45;CL:0002194!1.12e-12!63;CL:0000576!1.12e-12!63;CL:0000040!1.12e-12!63;CL:0000559!1.12e-12!63;CL:0000766!7.75e-12!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.09e-41;33!CL:0002057;7.09e-41;33!CL:0000473;8.64e-37;39!CL:0000234;8.64e-37;39!CL:0000576;2.42e-22;48!CL:0000766;3.12e-19;69!CL:0000511;2.05e-08;1!CL:0002625;2.05e-08;1!CL:0000216;2.05e-08;1!CL:0000763;7.76e-08;100!CL:0002087;2.25e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.62e-40,48;CL:0000234,4.62e-40,48;CL:0000860,1.08e-35,42;CL:0002057,1.08e-35,42;CL:0002194,2.56e-35,59;CL:0000576,2.56e-35,59;CL:0000040,2.56e-35,59;CL:0000559,2.56e-35,59;CL:0002009,4.55e-34,61;CL:0000839,2.84e-31,66;CL:0000557,9.19e-31,67;CL:0000766,2.01e-28,72;CL:0000763,6.70e-18,108;CL:0000049,6.70e-18,108;CL:0002087,1.30e-16,115;CL:0002031,8.80e-16,120;CL:0000738,1.56e-13,136;CL:0002032,6.54e-11,161;CL:0000837,6.54e-11,161;CL:0000037,2.57e-10,168;CL:0000988,1.28e-09,177;CL:0000511,1.37e-08,1;CL:0002625,1.37e-08,1;CL:0000216,1.37e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002057;6.78e-25;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.42e-11!80;UBERON:0001474!1.67e-10!86;UBERON:0004765!1.34e-09!101;UBERON:0001434!1.34e-09!101;UBERON:0002204!3.47e-09!167;UBERON:0002405!1.42e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.05e-08;1!UBERON:0001343;2.05e-08;1!UBERON:0004910;2.05e-08;1!UBERON:0004813;2.05e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.07e-27,76;UBERON:0001474,1.38e-24,82;UBERON:0004765,4.01e-22,90;UBERON:0002405,2.63e-21,93;UBERON:0002390,4.67e-20,98;UBERON:0003061,4.67e-20,98;UBERON:0001434,1.36e-19,100;UBERON:0002193,6.70e-18,108;UBERON:0002204,2.87e-13,167;UBERON:0003081,2.71e-10,203;UBERON:0001136,1.37e-08,1;UBERON:0001343,1.37e-08,1;UBERON:0004910,1.37e-08,1;UBERON:0005154,1.37e-08,1;UBERON:0005295,1.37e-08,1;UBERON:0004813,1.37e-08,1;UBERON:0005297,1.37e-08,1;UBERON:0005294,1.37e-08,1;UBERON:0010141,1.37e-08,1;UBERON:0005891,1.37e-08,1;UBERON:0000926,8.08e-08,315;UBERON:0004120,8.08e-08,315;UBERON:0006603,8.08e-08,315 | |||
|phase1_expression=0,0.428201047781966,0,0,1.78784437770915,0,0,1.89515962028049,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0.217010870715852,1.11957737119962,0.647787332037959,0.257575567634187,0.145398238779565,0.755751887377619,0,0.697287110717054,1.6446715520873,1.54853185447552,0.575384784644301,0.768482119587302,0.945928919554341,1.72372840368309,0.645484683583826,1.35426486594342,1.12945403725563,0.818718450173537,2.47195832889593,2.14258724659632,2.56743221660875,3.83602275479425,0,0.398927315243264,0.426224750532694,1.45104619314292,1.13477044938228,3.73693349397345,0.502497330513487,1.0429658368404,0.434377689410233,0,1.10483290796269,6.64571013625857,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0,0,1.18800285728205,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.45071417671979,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0.169560592310488,0.386521706326594,0.818238361772504,0,0.243947412259191,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,0,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0,0.277765335475589,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0.738651018262192,0.234004265139238,0.297262324577456,0,0.335964256397719,0.141775097242386,0,0,0,0,0.176096868026452,0.207328115540772,0.432359860250884,0.37872730027914,0,0,1.17217447210047,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0.301439377059586,0,0.199945982364114,1.2162378064119,0,2.10833939483032,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0.496215615637554,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0.519254429183621,0.232420756919918,0,0.200506470303285,0.0920809889358963,0,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.515205058238611,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0.137836572484531,0.214840489736547,0,0.170453254832202,0,0.165284915360978,0.192190067365106,0,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,1.09814811894422,0,0.202182481573316,0,0,0,0,0,0,0.282810863907425,0,0,0.66343897524122,0,0,0,0,0,0.281695602532241,0.143411352204052,0.196498082026242,0.35667105148125,0,0.211107635297664,0,0,0,0.288666338176536,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0.222617410045812,0.16480387422676,0,0,0,0,0.20453736500431,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0.347249989866585,0,0.120596438625408,0,0,0.295547618953547,0.219385397153973,0,0.139423744278603,0.230850775511391,0.341826167541004,0,0.0897576444097721,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.353830258013357,0,0,0,0,0,0,0.234264445725339,0,0.19566461893209,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0.284609546029793,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0.353024506766001,0,0,0,0,0,0.320635281006135,0.426905989478705,0.19980960958213,0,0,0,0.432164393964449,0.124252535565433,0,0.407712618220842,0.418411385249333,0,0,0,0.410716136675979,0,0,0,0,0,0.717873024576814,0,0,0.223171457441873,0,0,0,0.157566364614447,0.412079291905832,0.13480708770837,0.0984274815147488,0,0,0.136203406111576,0,0,0.415440338029185,0.674921674654501,0,0.0607495566580247,0.335434687599266,0,0.0524545881349981,0.316801009558219,0.179287339332845,0,0,0,0,0.542999601753713,0,0,0,0,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0.828478110694391,0.992332043623902,0,0,0,0.544017803369474,0.2506898940227,0.612691153526923,0.655745261419609,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0.159296767163702,0.449803112163605,0.155262956876259,0,0.265841714557995,0,0.450772826991655,0.761610424337591,0.406870733204662,0,0.107410557042488,0,0.398095888698616,0,0.343395705182793,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0.982829546539238,0,0,0,0,0.344429959321631,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,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| ||
|short_description=p@chr9:107545436..107545476,- | |||
}} | }} |
Latest revision as of 21:21, 31 July 2015
Short description: | p@chr9:107545436..107545476, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:107545436..107545476, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.62e-40 | 48 |
phagocyte | 4.62e-40 | 48 |
classical monocyte | 1.08e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.08e-35 | 42 |
monopoietic cell | 2.56e-35 | 59 |
monocyte | 2.56e-35 | 59 |
monoblast | 2.56e-35 | 59 |
promonocyte | 2.56e-35 | 59 |
macrophage dendritic cell progenitor | 4.55e-34 | 61 |
myeloid lineage restricted progenitor cell | 2.84e-31 | 66 |
granulocyte monocyte progenitor cell | 9.19e-31 | 67 |
myeloid leukocyte | 2.01e-28 | 72 |
myeloid cell | 6.70e-18 | 108 |
common myeloid progenitor | 6.70e-18 | 108 |
nongranular leukocyte | 1.30e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 8.80e-16 | 120 |
leukocyte | 1.56e-13 | 136 |
hematopoietic oligopotent progenitor cell | 6.54e-11 | 161 |
hematopoietic multipotent progenitor cell | 6.54e-11 | 161 |
hematopoietic stem cell | 2.57e-10 | 168 |
hematopoietic cell | 1.28e-09 | 177 |
androgen binding protein secreting cell | 1.37e-08 | 1 |
seminiferous tubule epithelial cell | 1.37e-08 | 1 |
Sertoli cell | 1.37e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.07e-27 | 76 |
bone element | 1.38e-24 | 82 |
skeletal element | 4.01e-22 | 90 |
immune system | 2.63e-21 | 93 |
hematopoietic system | 4.67e-20 | 98 |
blood island | 4.67e-20 | 98 |
skeletal system | 1.36e-19 | 100 |
hemolymphoid system | 6.70e-18 | 108 |
musculoskeletal system | 2.87e-13 | 167 |
lateral plate mesoderm | 2.71e-10 | 203 |
mesothelium | 1.37e-08 | 1 |
seminiferous tubule of testis | 1.37e-08 | 1 |
epithelium of male gonad | 1.37e-08 | 1 |
epithelial cord | 1.37e-08 | 1 |
sex cord | 1.37e-08 | 1 |
seminiferous tubule epithelium | 1.37e-08 | 1 |
testis sex cord | 1.37e-08 | 1 |
genital ridge | 1.37e-08 | 1 |
primitive sex cord of indifferent gonad | 1.37e-08 | 1 |
coelomic epithelium | 1.37e-08 | 1 |
mesoderm | 8.08e-08 | 315 |
mesoderm-derived structure | 8.08e-08 | 315 |
presumptive mesoderm | 8.08e-08 | 315 |