FFCP PHASE1:Hg19::chr9:108007969..108007987,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:108007969..108007987,+ | |||
|coexpression_cluster_id=C2049 | |||
|description=CAGE_peak_at_chr9:108007969..108007987,+ | |description=CAGE_peak_at_chr9:108007969..108007987,+ | ||
|id=chr9:108007969..108007987,+ | |id=chr9:108007969..108007987,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.35e-23!140;CL:0002057!6.22e-23!42;CL:0000766!2.57e-21!76;CL:0000860!8.96e-21!45;CL:0000557!1.55e-20!71;CL:0000839!4.54e-18!70;CL:0002009!3.96e-16!65;CL:0000037!1.61e-15!172;CL:0000566!1.61e-15!172;CL:0000763!4.67e-15!112;CL:0000049!4.67e-15!112;CL:0002031!6.99e-15!124;CL:0002194!3.09e-14!63;CL:0000576!3.09e-14!63;CL:0000040!3.09e-14!63;CL:0000559!3.09e-14!63;CL:0000988!9.55e-14!182;CL:0002032!9.86e-13!165;CL:0000837!9.86e-13!165;CL:0002087!3.34e-12!119;CL:0000451!4.12e-10!10;CL:0002393!7.58e-09!9;CL:0002397!7.58e-09!9;CL:0002274!1.24e-08!5;CL:0000457!1.24e-08!5;CL:0002191!1.24e-08!5;CL:0000097!1.24e-08!5;CL:0000831!1.24e-08!5;CL:0002028!1.24e-08!5;CL:0000453!9.58e-08!5;CL:0000990!1.28e-07!8 | |ontology_enrichment_celltype=CL:0000738!4.35e-23!140;CL:0002057!6.22e-23!42;CL:0000766!2.57e-21!76;CL:0000860!8.96e-21!45;CL:0000557!1.55e-20!71;CL:0000839!4.54e-18!70;CL:0002009!3.96e-16!65;CL:0000037!1.61e-15!172;CL:0000566!1.61e-15!172;CL:0000763!4.67e-15!112;CL:0000049!4.67e-15!112;CL:0002031!6.99e-15!124;CL:0002194!3.09e-14!63;CL:0000576!3.09e-14!63;CL:0000040!3.09e-14!63;CL:0000559!3.09e-14!63;CL:0000988!9.55e-14!182;CL:0002032!9.86e-13!165;CL:0000837!9.86e-13!165;CL:0002087!3.34e-12!119;CL:0000451!4.12e-10!10;CL:0002393!7.58e-09!9;CL:0002397!7.58e-09!9;CL:0002274!1.24e-08!5;CL:0000457!1.24e-08!5;CL:0002191!1.24e-08!5;CL:0000097!1.24e-08!5;CL:0000831!1.24e-08!5;CL:0002028!1.24e-08!5;CL:0000453!9.58e-08!5;CL:0000990!1.28e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002393;2.64e-40;6!CL:0002397;2.64e-40;6!CL:0000767;6.57e-29;3!CL:0000097;3.41e-18;5!CL:0000766;6.44e-18;69!CL:0000576;1.19e-13;48!CL:0000094;3.12e-11;8!CL:0000163;2.34e-10;9!CL:0000860;5.82e-10;33!CL:0002057;5.82e-10;33!CL:0000763;1.62e-08;100!CL:0000081;2.61e-08;11!CL:0000473;2.94e-07;39!CL:0000234;2.94e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.60e-35,72;CL:0000557,2.59e-29,67;CL:0000767,8.36e-29,3;CL:0002393,5.33e-27,9;CL:0002397,5.33e-27,9;CL:0000860,8.36e-26,42;CL:0002057,8.36e-26,42;CL:0000839,8.42e-26,66;CL:0000763,1.08e-25,108;CL:0000049,1.08e-25,108;CL:0000738,5.64e-25,136;CL:0000473,2.24e-22,48;CL:0000234,2.24e-22,48;CL:0002009,2.77e-20,61;CL:0000037,1.02e-19,168;CL:0000988,1.42e-18,177;CL:0002032,1.74e-18,161;CL:0000837,1.74e-18,161;CL:0000097,3.32e-18,5;CL:0002028,3.32e-18,5;CL:0002031,1.01e-17,120;CL:0002194,1.42e-17,59;CL:0000576,1.42e-17,59;CL:0000040,1.42e-17,59;CL:0000559,1.42e-17,59;CL:0000094,3.41e-11,8;CL:0000163,2.30e-10,9;CL:0002087,6.25e-10,115;CL:0000134,6.59e-09,354;CL:0002320,1.13e-08,361;CL:0000081,2.78e-08,11;CL:0000219,7.44e-08,386;CL:0000048,7.57e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;7.69e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.25e-17!80;UBERON:0001049!1.44e-16!57;UBERON:0005068!1.44e-16!57;UBERON:0006241!1.44e-16!57;UBERON:0007135!1.44e-16!57;UBERON:0002780!3.57e-16!41;UBERON:0001890!3.57e-16!41;UBERON:0006240!3.57e-16!41;UBERON:0001893!1.09e-15!34;UBERON:0003080!1.29e-15!42;UBERON:0001474!5.75e-15!86;UBERON:0002791!1.21e-14!33;UBERON:0002616!2.22e-14!59;UBERON:0002020!2.69e-14!34;UBERON:0003528!2.69e-14!34;UBERON:0001017!4.06e-14!82;UBERON:0001869!5.01e-14!32;UBERON:0002390!1.09e-13!102;UBERON:0003061!1.09e-13!102;UBERON:0005743!5.46e-13!86;UBERON:0004765!1.08e-12!101;UBERON:0001434!1.08e-12!101;UBERON:0002619!1.91e-12!22;UBERON:0001950!3.96e-12!20;UBERON:0002193!3.97e-12!112;UBERON:0000955!1.18e-11!69;UBERON:0006238!1.18e-11!69;UBERON:0000073!8.01e-11!94;UBERON:0001016!8.01e-11!94;UBERON:0000956!1.68e-10!25;UBERON:0000203!1.68e-10!25;UBERON:0003075!2.24e-10!86;UBERON:0007284!2.24e-10!86;UBERON:0002405!6.22e-10!115;UBERON:0002346!1.61e-09!90;UBERON:0007023!3.24e-09!115;UBERON:0003056!1.28e-08!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.29e-25,76;UBERON:0001474,1.35e-23,82;UBERON:0004765,2.58e-21,90;UBERON:0002405,1.47e-20,93;UBERON:0002390,2.11e-19,98;UBERON:0003061,2.11e-19,98;UBERON:0001434,5.70e-19,100;UBERON:0002193,2.11e-17,108;UBERON:0002204,1.96e-10,167;UBERON:0002384,2.34e-08,371;UBERON:0003081,3.73e-08,203 | |||
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|short_description=p@chr9:108007969..108007987,+ | |short_description=p@chr9:108007969..108007987,+ | ||
}} | }} |
Latest revision as of 21:25, 31 July 2015
Short description: | p@chr9:108007969..108007987, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:108007969..108007987, + |
Coexpression cluster: | C2049_CD14_Mast_Basophils_Eosinophils_Neutrophils_Peripheral_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.29e-25 | 76 |
bone element | 1.35e-23 | 82 |
skeletal element | 2.58e-21 | 90 |
immune system | 1.47e-20 | 93 |
hematopoietic system | 2.11e-19 | 98 |
blood island | 2.11e-19 | 98 |
skeletal system | 5.70e-19 | 100 |
hemolymphoid system | 2.11e-17 | 108 |
musculoskeletal system | 1.96e-10 | 167 |
connective tissue | 2.34e-08 | 371 |
lateral plate mesoderm | 3.73e-08 | 203 |