FFCP PHASE1:Hg19::chr9:125140209..125140236,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:125140209..125140236,+ | |||
|coexpression_cluster_id=C2017 | |coexpression_cluster_id=C2017 | ||
|description=CAGE_peak_at_chr9:125140209..125140236,+ | |description=CAGE_peak_at_chr9:125140209..125140236,+ | ||
|id=chr9:125140209..125140236,+ | |id=chr9:125140209..125140236,+ | ||
|ontology_enrichment_celltype=CL:0000057!8.06e-11!75;CL:0000048!3.29e-09!430;CL:0000723!6.14e-09!436;CL:0000034!3.41e-08!444;CL:0000055!3.45e-08!180 | |ontology_enrichment_celltype=CL:0000057!8.06e-11!75;CL:0000048!3.29e-09!430;CL:0000723!6.14e-09!436;CL:0000034!3.41e-08!444;CL:0000055!3.45e-08!180 | ||
|ontology_enrichment_celltype_v019=CL:0002552;7.24e-14;5!CL:1000306;4.40e-10;4!CL:0002547;4.40e-10;4!CL:0002195;1.96e-09;2!CL:0002571;1.96e-09;2!CL:0000097;2.42e-08;5!CL:0002548;9.18e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,7.19e-14,5;CL:1000306,4.03e-10,4;CL:0002547,4.03e-10,4;CL:0000057,3.96e-09,76;CL:0002195,4.35e-09,2;CL:0002571,4.35e-09,2;CL:0000097,1.63e-08,5;CL:0002028,1.63e-08,5;CL:0002548,6.74e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!3.99e-09!113;UBERON:0004535!1.14e-08!110;UBERON:0001637!1.38e-07!42;UBERON:0003509!1.38e-07!42;UBERON:0004572!1.38e-07!42;UBERON:0004872!5.31e-07!84;UBERON:0004573!6.80e-07!33;UBERON:0004571!6.80e-07!33 | |ontology_enrichment_uberon=UBERON:0001009!3.99e-09!113;UBERON:0004535!1.14e-08!110;UBERON:0001637!1.38e-07!42;UBERON:0003509!1.38e-07!42;UBERON:0004572!1.38e-07!42;UBERON:0004872!5.31e-07!84;UBERON:0004573!6.80e-07!33;UBERON:0004571!6.80e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;4.40e-10;4!UBERON:0000415;4.40e-10;4!UBERON:0007240;4.40e-10;4!UBERON:0005742;4.40e-10;4!UBERON:0005734;4.40e-10;4!UBERON:0004664;4.40e-10;4!UBERON:0004663;4.40e-10;4!UBERON:0001828;1.09e-08;8!UBERON:0001637;2.02e-08;42!UBERON:0003509;2.02e-08;42!UBERON:0004572;2.02e-08;42!UBERON:0004573;3.62e-07;33!UBERON:0004571;3.62e-07;33!UBERON:0003688;9.18e-07;6!UBERON:0002358;9.18e-07;6!UBERON:0003684;9.18e-07;6!UBERON:0001178;9.18e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,4.03e-10,4;UBERON:0007240,4.03e-10,4;UBERON:0005742,4.03e-10,4;UBERON:0005734,4.03e-10,4;UBERON:0004664,4.03e-10,4;UBERON:0004663,4.03e-10,4;UBERON:0001637,1.19e-09,42;UBERON:0003509,1.19e-09,42;UBERON:0004572,1.19e-09,42;UBERON:0004535,3.37e-09,109;UBERON:0004872,5.08e-09,83;UBERON:0001009,7.69e-09,112;UBERON:0001828,1.09e-08,8;UBERON:0004573,1.21e-08,33;UBERON:0004571,1.21e-08,33;UBERON:0000161,9.84e-08,36;UBERON:0004111,1.27e-07,240;UBERON:0000926,1.99e-07,315;UBERON:0004120,1.99e-07,315;UBERON:0006603,1.99e-07,315;UBERON:0003914,3.24e-07,117;UBERON:0003081,8.04e-07,203;UBERON:0003688,9.69e-07,6;UBERON:0002358,9.69e-07,6;UBERON:0003684,9.69e-07,6;UBERON:0001178,9.69e-07,6 | |||
|phase1_expression=0.908391896352783,1.07050261945492,2.53717927372748,1.0007329835313,0,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0.47296445977717,0,0.645484683583826,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0.502497330513487,0,0,1.21079900526674,0,0.316462387440884,0.422510572623884,0,0,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0,0.664789802594326,0,0,0,0,0,0.347140501607594,0.56530794192401,1.25849830862972,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39293562831038,0.132409180813219,6.02356903572509,1.41867352879343,0.560677600142307,2.1349799145941,0.24666754841716,0,1.75123873690594,1.63461903113459,0.151357427644931,0,0.234321431833797,0.312160076830321,0.570471821544449,0.747243402759005,0.23486899728753,0.161872944368132,0.280901613404497,2.65400422631361,1.47401180774122,4.02970546585485,0,1.23633464639278,1.82032272387605,0,0.505008341862199,1.7516592782075,2.77064115484183,0,0,0.600952235626387,0.794025282120147,0,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0,0.292311015483596,0,0,0,0,0,0.847802961552438,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.616339038092582,3.7319060797339,1.72943944100354,2.90357596880674,0,0,0,0,0.308482478109971,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,1.00084595560703,0,0,0.325736184293735,2.13235169245527,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0.749007023947182,0,0.414415513436035,0.12269149171914,0.500170521059677,0.271265023699736,0,1.60586089917446,0.788512075169673,0.117141414992713,0,0,0,0.664225598535437,0.184369168541703,0.955719759148911,0,0,0,0,0,0,1.66435439510497,0,0.248107807818777,0,0.841980283299221,1.79394808957981,0.511707249066704,0.804269605718038,0,0,0,0,0,0,0,0,0,0.114814448164607,0.728364672026868,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0,0,0,0,0,0,2.51849877464512,0,2.7723022215848,1.06461206063404,0,0.37064843820784,0.572499546967965,0,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0,0,0.117812402345686,1.2130948894399,0,0.842516912477962,0.48763373908959,0.243713489631284,0,0.136499911407986,1.1312434556297,1.13008116620243,1.10273068709225,0.66343897524122,2.63070531152258,0,0,0,0,0.563391205064483,0,0,0,0.354761064070598,0,0,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,1.52927441428475,1.70894156152249,0.714695326373367,0.411362273086194,0.648473311192717,0,2.37937552888281,0,0,0,0,0,0,0,0.199579371432817,0,0.211673582723883,0.324621940274555,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0.311039587661807,0,0,0,4.04437963111428,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0.167821586975843,0.189753732724185,0.158936578980379,0,0,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.347119476670262,0.391969589657511,0,0,0,0,0.0730893170861856,0,0.581934098930517,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.223171457441873,0,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,0.77380195455795,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0.447764408660622,0.233713309847224,0,0,0,0,0.228840068396924,0,1.08806040407946,0.887130899937803,0.318593534327405,0,0,0,0.265841714557995,0,0.901545653983311,0,0,0.727394636810238,0.644463342254931,1.39210127963548,0.398095888698616,0,0,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0.132864840313363,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.41070377476274,2.7562092961788,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0.366857197043358,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60710550763486,0,0,0.227662191351298,0,0,0,0,0,0,0,1.02041020705668,0,0,0.913158720509496,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,4.90296643507811,0,0,0,0.4226557275834,0.169927114687817,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.151557396436479,0.26796413015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| ||
|short_description=p@chr9:125140209..125140236,+ | |short_description=p@chr9:125140209..125140236,+ | ||
}} | }} |
Latest revision as of 22:30, 31 July 2015
Short description: | p@chr9:125140209..125140236, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:125140209..125140236, + |
Coexpression cluster: | C2017_Fibroblast_smooth_Smooth_bladder_hepatic_Cardiac_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 7.19e-14 | 5 |
fibroblast of tunica adventitia of artery | 4.03e-10 | 4 |
fibroblast of the aortic adventitia | 4.03e-10 | 4 |
fibroblast | 3.96e-09 | 76 |
hepatic stem cell | 4.35e-09 | 2 |
hepatic mesenchymal stem cell | 4.35e-09 | 2 |
mast cell | 1.63e-08 | 5 |
basophil mast progenitor cell | 1.63e-08 | 5 |
cardiac fibroblast | 6.74e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
artery wall | 4.03e-10 | 4 |
tunica adventitia of artery | 4.03e-10 | 4 |
adventitia | 4.03e-10 | 4 |
tunica adventitia of blood vessel | 4.03e-10 | 4 |
aorta tunica adventitia | 4.03e-10 | 4 |
aorta wall | 4.03e-10 | 4 |
artery | 1.19e-09 | 42 |
arterial blood vessel | 1.19e-09 | 42 |
arterial system | 1.19e-09 | 42 |
cardiovascular system | 3.37e-09 | 109 |
splanchnic layer of lateral plate mesoderm | 5.08e-09 | 83 |
circulatory system | 7.69e-09 | 112 |
gingiva | 1.09e-08 | 8 |
systemic artery | 1.21e-08 | 33 |
systemic arterial system | 1.21e-08 | 33 |
orifice | 9.84e-08 | 36 |
anatomical conduit | 1.27e-07 | 240 |
mesoderm | 1.99e-07 | 315 |
mesoderm-derived structure | 1.99e-07 | 315 |
presumptive mesoderm | 1.99e-07 | 315 |
epithelial tube | 3.24e-07 | 117 |
lateral plate mesoderm | 8.04e-07 | 203 |
omentum | 9.69e-07 | 6 |
peritoneum | 9.69e-07 | 6 |
abdominal cavity | 9.69e-07 | 6 |
visceral peritoneum | 9.69e-07 | 6 |