FFCP PHASE1:Hg19::chrX:109919221..109919232,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:109919221..109919232,- | |||
|description=CAGE_peak_at_chrX:109919221..109919232,- | |description=CAGE_peak_at_chrX:109919221..109919232,- | ||
|id=chrX:109919221..109919232,- | |id=chrX:109919221..109919232,- | ||
|ontology_enrichment_celltype=CL:0000135;1.13e-10;3!CL:0000388;1.13e-10;3!CL:0000214;2.16e-10;3!CL:0000342;2.05e-08;1!CL:0002565;2.05e-08;1 | |ontology_enrichment_celltype=CL:0000136!6.93e-07!15 | ||
| | |ontology_enrichment_celltype_v019=CL:0000135;1.13e-10;3!CL:0000388;1.13e-10;3!CL:0000214;2.16e-10;3!CL:0000342;2.05e-08;1!CL:0002565;2.05e-08;1 | ||
|ontology_enrichment_disease=DOID:0060084;2.16e-10;3!DOID:127;2.16e-10;3!DOID:3112;2.05e-08;1!DOID:0060072;5.23e-08;4 | |ontology_enrichment_celltype_v019_2=CL:0000135,1.70e-10,3;CL:0000388,1.70e-10,3;CL:0000214,2.49e-10,3;CL:0000342,2.46e-08,1;CL:0002565,2.46e-08,1 | ||
|ontology_enrichment_uberon=UBERON:0007846;1.13e-10;3!UBERON:0003978;1.13e-10;3!UBERON:0000946;1.13e-10;3!UBERON:0000043;1.13e-10;3!UBERON:0007845;1.13e-10;3!UBERON:0006915;2.16e-10;3!UBERON:0007616;2.16e-10;3!UBERON:0002217;2.16e-10;3!UBERON:0002018;2.16e-10;3!UBERON:0000989;5.58e-09;1!UBERON:0008811;5.58e-09;1!UBERON:0002146;7.54e-09;1!UBERON:0005623;7.54e-09;1!UBERON:0006834;2.05e-08;1!UBERON:0001000;2.05e-08;1!UBERON:0002135;2.05e-08;1!UBERON:0002506;2.05e-08;1!UBERON:0005352;2.05e-08;1!UBERON:0001769;2.05e-08;1!UBERON:0000488;5.23e-08;4!UBERON:0004457;1.28e-07;9!UBERON:0000042;1.28e-07;9!UBERON:0002046;9.83e-07;5 | |ontology_enrichment_development_v019=UBERON:0004874;5.58e-09;1!UBERON:0005062;3.23e-08;4!UBERON:0007284;3.23e-08;4!UBERON:0005795;6.67e-07;10!UBERON:0007123;9.83e-07;5 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.16e-10;3!DOID:127;2.16e-10;3!DOID:3112;2.05e-08;1!DOID:0060072;5.23e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.06e-10,3;DOID:127,2.06e-10,3;DOID:3112,1.10e-08,1;DOID:0060072,5.06e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.92e-35!115;UBERON:0003075!1.16e-20!86;UBERON:0007284!1.16e-20!86;UBERON:0002346!2.22e-20!90;UBERON:0001049!1.80e-16!57;UBERON:0005068!1.80e-16!57;UBERON:0006241!1.80e-16!57;UBERON:0007135!1.80e-16!57;UBERON:0003056!2.56e-16!61;UBERON:0001869!2.92e-16!32;UBERON:0002020!5.61e-15!34;UBERON:0003528!5.61e-15!34;UBERON:0001893!6.13e-15!34;UBERON:0000956!7.92e-15!25;UBERON:0000203!7.92e-15!25;UBERON:0002616!1.75e-14!59;UBERON:0002791!4.15e-14!33;UBERON:0005743!9.50e-14!86;UBERON:0001017!7.48e-13!82;UBERON:0003080!2.99e-12!42;UBERON:0000153!6.65e-12!129;UBERON:0007811!6.65e-12!129;UBERON:0002619!8.83e-12!22;UBERON:0001950!9.75e-12!20;UBERON:0000955!1.01e-11!69;UBERON:0006238!1.01e-11!69;UBERON:0000033!1.03e-11!123;UBERON:0000073!1.87e-11!94;UBERON:0001016!1.87e-11!94;UBERON:0002780!2.40e-11!41;UBERON:0001890!2.40e-11!41;UBERON:0006240!2.40e-11!41;UBERON:0000064!3.66e-10!219;UBERON:0000924!2.75e-09!173;UBERON:0006601!2.75e-09!173;UBERON:0004121!3.40e-09!169;UBERON:0007625!1.77e-08!11;UBERON:0000200!6.44e-08!6;UBERON:0002046!1.28e-07!5;UBERON:0004117!1.28e-07!5;UBERON:0007689!1.28e-07!5;UBERON:0007123!1.28e-07!5;UBERON:0003091!1.28e-07!5;UBERON:0000488!2.35e-07!4;UBERON:0000020!2.59e-07!23;UBERON:0001872!3.03e-07!5;UBERON:0001032!7.02e-07!24;UBERON:0004456!7.02e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.13e-10;3!UBERON:0003978;1.13e-10;3!UBERON:0000946;1.13e-10;3!UBERON:0000043;1.13e-10;3!UBERON:0007845;1.13e-10;3!UBERON:0006915;2.16e-10;3!UBERON:0007616;2.16e-10;3!UBERON:0002217;2.16e-10;3!UBERON:0002018;2.16e-10;3!UBERON:0000989;5.58e-09;1!UBERON:0008811;5.58e-09;1!UBERON:0002146;7.54e-09;1!UBERON:0005623;7.54e-09;1!UBERON:0006834;2.05e-08;1!UBERON:0001000;2.05e-08;1!UBERON:0002135;2.05e-08;1!UBERON:0002506;2.05e-08;1!UBERON:0005352;2.05e-08;1!UBERON:0001769;2.05e-08;1!UBERON:0000488;5.23e-08;4!UBERON:0004457;1.28e-07;9!UBERON:0000042;1.28e-07;9!UBERON:0002046;9.83e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,8.26e-11,3;UBERON:0009751,8.26e-11,3;UBERON:0000946,8.26e-11,3;UBERON:0002523,8.26e-11,3;UBERON:0005983,8.26e-11,3;UBERON:0002165,8.26e-11,3;UBERON:0002062,8.26e-11,3;UBERON:0007280,8.26e-11,3;UBERON:0007846,1.70e-10,3;UBERON:0000043,1.70e-10,3;UBERON:0007845,1.70e-10,3;UBERON:0006915,2.49e-10,3;UBERON:0007616,2.49e-10,3;UBERON:0002217,2.49e-10,3;UBERON:0002018,2.49e-10,3;UBERON:0000989,5.59e-09,1;UBERON:0008811,5.59e-09,1;UBERON:0006258,5.59e-09,1;UBERON:0005876,5.59e-09,1;UBERON:0004874,5.59e-09,1;UBERON:0002146,7.56e-09,1;UBERON:0005623,7.56e-09,1;UBERON:0002135,1.27e-08,1;UBERON:0001000,1.48e-08,1;UBERON:0005352,1.48e-08,1;UBERON:0002506,2.46e-08,1;UBERON:0001769,2.46e-08,1;UBERON:0006834,3.53e-08,1;UBERON:0000488,5.24e-08,4;UBERON:0002046,7.07e-07,5;UBERON:0004117,7.07e-07,5;UBERON:0007689,7.07e-07,5;UBERON:0007123,7.07e-07,5;UBERON:0003091,7.07e-07,5 | |||
|phase1_expression=0.181678379270557,2.5692062866918,0,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0,0.313454721478088,0.572471974262113,0.273748850145768,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,1.51255707462509,0.886917589850256,0.966182642624386,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3725424823882,0,0,0,0,0,0,1.44331342025273,0.463721619900307,0.939269553886573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50764638800914,0.637938751653163,0,0,0,0,0,0,0,0.535286966391485,0.473107245101804,0.937131319941706,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0,0,0.290033387828457,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47775344708365,1.31717957183961,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.597743964753209,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0.331737779793674,0.591095237907095,0,0,0,0.538651809526579,0,0,0,0,0.638002319463839,0,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,1.57833761139756,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0.19871461170299,0.316553979779393,0,0.0801588202515337,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,2.52076466412852,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.485996453264197,0,0.236417121897595,0.104909176269996,0,0,0,0.714695326373367,0,0,1.62899880526114,0,1.30634944043764,0,0,0,0,0,0,0.258565912723101,0,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0,0,0.5013797880454,0.919036730290385,0.655745261419609,0,0.886068179966986,2.44052529803926,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0.179088841081487,0,0,0.883445729729405,0,0,0,0,0,0.138258436151731,0,0,0,2.6208787907713,0,0,0,0,0,0.567515953566836,0.368211900503681,0,0,0,0,0,0,0,0.637724760305049,0,0,0,0,0,0,0,0.192687675289379,0,0.638535436228605,0.82046545696302,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,1.96526301012116,0,0.202612753855184,0.781078098613847,1.03343398250592,0.126831620387814,0.546974809018219,0.548257766857182,5.45832296228224,0,0,0,0,0,0,0.266107110487916,0,0,0.0679697329768317,0.197318320688547,0,0,1.56986185701028,0.471346769748006,0,0.913158720509496,0,0,1.1436247068265,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,1.47088993052343,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0.436350690340377,0.5290268405154,1.11598505450025,0,2.16313281061895,0,0,0,0.101988829741982,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0,0.0620747142958579,0.672791175483681,0.0636471582781649,2.82964064541507,0.653150243690884,0.342233301085281,0,0.430333232356058,0.332660356546013,0,0,0,0,0,1.1001729976458,0,0,0.201273793591026,0 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|short_description=p@chrX:109919221..109919232,- | |short_description=p@chrX:109919221..109919232,- | ||
}} | }} |
Latest revision as of 05:01, 1 August 2015
Short description: | p@chrX:109919221..109919232, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:109919221..109919232, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.70e-10 | 3 |
tendon cell | 1.70e-10 | 3 |
synovial cell | 2.49e-10 | 3 |
pigment cell (sensu Vertebrata) | 2.46e-08 | 1 |
iris pigment epithelial cell | 2.46e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
valve | 8.26e-11 | 3 |
cardiac mesenchyme | 8.26e-11 | 3 |
cardial valve | 8.26e-11 | 3 |
tunica intima | 8.26e-11 | 3 |
heart layer | 8.26e-11 | 3 |
endocardium | 8.26e-11 | 3 |
endocardial cushion | 8.26e-11 | 3 |
presumptive endocardium | 8.26e-11 | 3 |
dense regular connective tissue | 1.70e-10 | 3 |
tendon | 1.70e-10 | 3 |
regular connective tissue | 1.70e-10 | 3 |
stratified squamous epithelium | 2.49e-10 | 3 |
layer of synovial tissue | 2.49e-10 | 3 |
synovial joint | 2.49e-10 | 3 |
synovial membrane of synovial joint | 2.49e-10 | 3 |
penis | 5.59e-09 | 1 |
intromittent organ | 5.59e-09 | 1 |
lateral plate mesenchyme | 5.59e-09 | 1 |
undifferentiated genital tubercle | 5.59e-09 | 1 |
somatopleure | 5.59e-09 | 1 |
pulmonary valve | 7.56e-09 | 1 |
semi-lunar valve | 7.56e-09 | 1 |
mitral valve | 1.27e-08 | 1 |
vas deferens | 1.48e-08 | 1 |
spermatic cord | 1.48e-08 | 1 |
iris epithelium | 2.46e-08 | 1 |
iris | 2.46e-08 | 1 |
uterus or analog | 3.53e-08 | 1 |
atypical epithelium | 5.24e-08 | 4 |
thyroid gland | 7.07e-07 | 5 |
pharyngeal pouch | 7.07e-07 | 5 |
thyroid diverticulum | 7.07e-07 | 5 |
pharyngeal pouch 2 | 7.07e-07 | 5 |
thyroid primordium | 7.07e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.06e-10 | 3 |
leiomyoma | 2.06e-10 | 3 |
papillary adenocarcinoma | 1.10e-08 | 1 |
benign neoplasm | 5.06e-08 | 4 |