FFCP PHASE1:Hg19::chrX:118362928..118362933,+: Difference between revisions
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|id=chrX:118362928..118362933,+
|short_description=p@chrX:118362928..118362933,+
|description=CAGE_peak_at_chrX:118362928..118362933,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:118362928..118362933,+ | |||
|description=CAGE_peak_at_chrX:118362928..118362933,+ | |||
|id=chrX:118362928..118362933,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.10e-13!180;CL:0000057!1.57e-09!75;CL:0002582!3.97e-08!3;CL:0002570!8.17e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002551;2.32e-25;6!CL:0002262;1.33e-09;2!CL:1000398;1.33e-09;2!CL:0002583;1.33e-09;2!CL:0002596;1.33e-09;2!CL:0000188;2.65e-08;9!CL:0002620;4.49e-07;23!CL:0000746;8.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002551,2.75e-25,6;CL:0002596,1.03e-09,2;CL:0002262,1.22e-09,2;CL:1000398,1.22e-09,2;CL:0002583,2.02e-09,2;CL:0000188,2.13e-08,9;CL:0000187,1.32e-07,55;CL:0000680,3.29e-07,58;CL:0000056,3.29e-07,58;CL:0000355,3.29e-07,58;CL:0002620,4.68e-07,23;CL:0000393,7.48e-07,61;CL:0000211,7.48e-07,61;CL:0000746,8.62e-07,3;CL:0000513,8.62e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000513;8.14e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!5.06e-07!45;UBERON:0002416!5.06e-07!45;UBERON:0002097!5.81e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;3.73e-17;9!UBERON:0001281;1.33e-09;2!UBERON:0003497;1.33e-09;2!UBERON:0003909;1.33e-09;2!UBERON:0003835;1.33e-09;2!UBERON:0005396;1.33e-09;2!UBERON:0001280;8.14e-07;3!UBERON:0004647;8.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,4.17e-17,9;UBERON:0004016,4.17e-17,9;UBERON:0010083,4.17e-17,9;UBERON:0002329,2.20e-14,71;UBERON:0003059,2.20e-14,71;UBERON:0007282,2.20e-14,71;UBERON:0004290,2.20e-14,71;UBERON:0009618,2.20e-14,71;UBERON:0003077,3.54e-14,72;UBERON:0007285,3.54e-14,72;UBERON:0007524,5.63e-14,73;UBERON:0007503,4.80e-13,78;UBERON:0000486,3.17e-12,83;UBERON:0005256,2.63e-10,122;UBERON:0005396,1.03e-09,2;UBERON:0001281,1.22e-09,2;UBERON:0003497,1.22e-09,2;UBERON:0003909,1.22e-09,2;UBERON:0003835,1.22e-09,2;UBERON:0000490,2.33e-08,148;UBERON:0003104,1.14e-07,160;UBERON:0009142,1.14e-07,160;UBERON:0001280,7.70e-07,3;UBERON:0004647,7.70e-07,3;UBERON:0005171,7.70e-07,3;UBERON:0001134,9.66e-07,62;UBERON:0002036,9.66e-07,62;UBERON:0003082,9.66e-07,62 | |||
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| ||
|short_description=p@chrX:118362928..118362933,+ | |||
}} | }} |
Latest revision as of 05:16, 1 August 2015
Short description: | p@chrX:118362928..118362933, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:118362928..118362933, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 2.75e-25 | 6 |
smooth muscle cell of the carotid artery | 1.03e-09 | 2 |
endothelial cell of sinusoid | 1.22e-09 | 2 |
endothelial cell of hepatic sinusoid | 1.22e-09 | 2 |
subcutaneous preadipocyte | 2.02e-09 | 2 |
cell of skeletal muscle | 2.13e-08 | 9 |
muscle cell | 1.32e-07 | 55 |
muscle precursor cell | 3.29e-07 | 58 |
myoblast | 3.29e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.29e-07 | 58 |
skin fibroblast | 4.68e-07 | 23 |
electrically responsive cell | 7.48e-07 | 61 |
electrically active cell | 7.48e-07 | 61 |
cardiac muscle cell | 8.62e-07 | 3 |
cardiac muscle myoblast | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dermis | 4.17e-17 | 9 |
dermatome | 4.17e-17 | 9 |
future dermis | 4.17e-17 | 9 |
somite | 2.20e-14 | 71 |
presomitic mesoderm | 2.20e-14 | 71 |
presumptive segmental plate | 2.20e-14 | 71 |
dermomyotome | 2.20e-14 | 71 |
trunk paraxial mesoderm | 2.20e-14 | 71 |
paraxial mesoderm | 3.54e-14 | 72 |
presumptive paraxial mesoderm | 3.54e-14 | 72 |
dense mesenchyme tissue | 5.63e-14 | 73 |
epithelial vesicle | 4.80e-13 | 78 |
multilaminar epithelium | 3.17e-12 | 83 |
trunk mesenchyme | 2.63e-10 | 122 |
carotid artery segment | 1.03e-09 | 2 |
hepatic sinusoid | 1.22e-09 | 2 |
abdomen blood vessel | 1.22e-09 | 2 |
sinusoid | 1.22e-09 | 2 |
abdominal segment blood vessel | 1.22e-09 | 2 |
unilaminar epithelium | 2.33e-08 | 148 |
mesenchyme | 1.14e-07 | 160 |
entire embryonic mesenchyme | 1.14e-07 | 160 |
liver parenchyma | 7.70e-07 | 3 |
liver lobule | 7.70e-07 | 3 |
hepatic duct | 7.70e-07 | 3 |
skeletal muscle tissue | 9.66e-07 | 62 |
striated muscle tissue | 9.66e-07 | 62 |
myotome | 9.66e-07 | 62 |