FFCP PHASE1:Hg19::chrX:5644225..5644242,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=103bp_to_ENST00000422914_5end | |||
|cluster_id=chrX:5644225..5644242,- | |||
|coexpression_cluster_id=C2558 | |||
|description=CAGE_peak_1_at_ENST00000422914_5end | |||
|id=chrX:5644225..5644242,- | |||
|ontology_enrichment_celltype=CL:0002194!2.28e-27!63;CL:0000576!2.28e-27!63;CL:0000040!2.28e-27!63;CL:0000559!2.28e-27!63;CL:0002009!3.70e-26!65;CL:0000839!1.94e-23!70;CL:0000557!6.10e-23!71;CL:0000766!1.17e-20!76;CL:0002057!2.76e-17!42;CL:0000860!1.27e-15!45;CL:0000763!1.75e-10!112;CL:0000049!1.75e-10!112;CL:0002087!2.84e-09!119;CL:0002031!1.67e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.80e-49;39!CL:0000234;1.80e-49;39!CL:0000860;7.48e-35;33!CL:0002057;7.48e-35;33!CL:0000235;8.55e-33;6!CL:0000576;9.76e-26;48!CL:0000766;4.20e-23;69!CL:0002619;1.90e-17;3!CL:0000763;4.17e-10;100!CL:0002087;3.10e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.67e-55,59;CL:0000576,2.67e-55,59;CL:0000040,2.67e-55,59;CL:0000559,2.67e-55,59;CL:0000473,3.22e-54,48;CL:0000234,3.22e-54,48;CL:0002009,2.45e-53,61;CL:0000839,6.13e-49,66;CL:0000557,3.88e-48,67;CL:0000766,1.86e-44,72;CL:0000860,6.56e-33,42;CL:0002057,6.56e-33,42;CL:0000235,9.57e-33,6;CL:0000763,6.47e-28,108;CL:0000049,6.47e-28,108;CL:0002087,6.86e-26,115;CL:0002031,1.38e-24,120;CL:0000738,4.68e-21,136;CL:0002619,1.96e-17,3;CL:0002032,6.16e-17,161;CL:0000837,6.16e-17,161;CL:0000037,5.30e-16,168;CL:0000988,6.58e-15,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.77e-24;42!CL:0000049;6.95e-08;108!UBERON:0010115;7.81e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.35e-36!115;UBERON:0000062!4.81e-20!511;UBERON:0002371!4.80e-19!80;UBERON:0001474!6.43e-17!86;UBERON:0002405!5.15e-16!115;UBERON:0002390!2.54e-15!102;UBERON:0003061!2.54e-15!102;UBERON:0001049!2.94e-15!57;UBERON:0005068!2.94e-15!57;UBERON:0006241!2.94e-15!57;UBERON:0007135!2.94e-15!57;UBERON:0004765!1.07e-14!101;UBERON:0001434!1.07e-14!101;UBERON:0002193!7.03e-14!112;UBERON:0000467!1.58e-13!625;UBERON:0000480!1.87e-13!626;UBERON:0003080!4.71e-13!42;UBERON:0002780!4.84e-12!41;UBERON:0001890!4.84e-12!41;UBERON:0006240!4.84e-12!41;UBERON:0000468!8.49e-12!659;UBERON:0002616!4.00e-11!59;UBERON:0001017!1.01e-10!82;UBERON:0005743!1.41e-10!86;UBERON:0003075!6.96e-10!86;UBERON:0007284!6.96e-10!86;UBERON:0001893!8.93e-10!34;UBERON:0000923!2.93e-09!604;UBERON:0005291!2.93e-09!604;UBERON:0006598!2.93e-09!604;UBERON:0002532!2.93e-09!604;UBERON:0000955!3.20e-09!69;UBERON:0006238!3.20e-09!69;UBERON:0002050!3.40e-09!605;UBERON:0005423!3.40e-09!605;UBERON:0002346!4.47e-09!90;UBERON:0002791!5.33e-09!33;UBERON:0000073!8.83e-09!94;UBERON:0001016!8.83e-09!94;UBERON:0000922!9.48e-09!612;UBERON:0002020!1.46e-08!34;UBERON:0003528!1.46e-08!34;UBERON:0001869!2.29e-08!32;UBERON:0003056!6.77e-08!61;UBERON:0002420!4.30e-07!9;UBERON:0007245!4.30e-07!9;UBERON:0010009!4.30e-07!9;UBERON:0010011!4.30e-07!9;UBERON:0000454!4.30e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;6.37e-08;3!UBERON:0002363;7.81e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.42e-42,76;UBERON:0002405,5.28e-39,93;UBERON:0001474,2.01e-38,82;UBERON:0004765,1.79e-37,90;UBERON:0002390,5.93e-34,98;UBERON:0003061,5.93e-34,98;UBERON:0001434,3.43e-33,100;UBERON:0002193,8.02e-33,108;UBERON:0002204,1.22e-17,167;UBERON:0003081,3.94e-16,203;UBERON:0000926,3.95e-09,315;UBERON:0004120,3.95e-09,315;UBERON:0006603,3.95e-09,315;UBERON:0004151,6.49e-08,3;UBERON:0002363,8.49e-07,1;UBERON:0007645,8.49e-07,1;UBERON:0007647,8.49e-07,1;UBERON:0010115,8.49e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66198622559563,0.200544447470142,0,3.35873211359887,5.50619232232265,6.43938919085466,0.145398238779565,0.755751887377619,0.242584061187816,0,2.05583944010913,1.54853185447552,0,1.5369642391746,1.18241114944293,1.37898272294647,4.51839278508678,2.70852973188684,0.188242339542605,0,0.449446968890169,0.918251677112708,3.53021929783703,2.55734850319616,0,0,0,1.7412554317715,10.2129340444405,6.85104473895132,0,1.5644487552606,1.3031330682307,0,9.57521853567668,4.1140110367315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.649094787309367,0.696518949197069,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0.355009592516614,0.403008392910561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44703808522356,3.04205544681009,3.86441021950693,0,1.51183915378974,0,0.626909658919938,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,12.054170194371,6.32501818449095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709522128141196,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0.23874448473769,0,0,0.994147647766298,0.562677665642051,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,1.02044907978036,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.482385754501632,0,0.110579259931225,0,0,0,0,0.307801034015188,0,0,0,0,0,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0.530745387020035,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,3.09614240179591,0,0,0,0,0,0,0,0.693373365065693,0,0,0,0.698906672968121,0,0,0,0,0.193978032976839,0,0,0,0,0.253243183823515,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0.916641696046735,0,0.599037001496973,0.429226048136571,0.446342914883745,0.134366944973453,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.242998226632099,0,0.630445658393585,0.0524545881349981,0,0,0,1.42939065274673,2.64836788146173,0,0,0,0,0,0,0,0,0.293104467356165,1.32506888912221,0,0.13223260174269,0,0,0,0.157204305099666,0.414239055347196,1.48849806543585,0,0,0,0,0,0,0,0,2.65820453990096,0,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.205116364240755,0,0.138314504928436,0.322951291263702,0,0,0,0,0,0.762764190934334,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0.270150338473579,0.781078098613847,0.206686796501184,0,0,0,0,0,0,0,0.336283722218824,0,0.455324382702595,0.177404740325278,0,0,0.611727596791485,0.197318320688547,0,0,0.39246546425257,0.157115589916002,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0.196308467114945,0.594092800654172,0.4226557275834,0,1.4097587696978,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,1.65833887891756,0.413731983447581,0,0,0,0.372448285775147,0,0.318235791390825,0,0.217716747896961,0.342233301085281,0,0.502055437748735,0.332660356546013,0,0,0,0,0,0,0,0,0.603821380773079,0 | |||
|short_description=p1@ENST00000422914 | |||
}} |
Latest revision as of 08:59, 1 August 2015
Short description: | p1@ENST00000422914 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000422914_5end |
Coexpression cluster: | C2558_CD14_Monocytederived_Macrophage_spleen_dura_lymph_left |
Association with transcript: | 103bp_to_ENST00000422914_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.67e-55 | 59 |
monocyte | 2.67e-55 | 59 |
monoblast | 2.67e-55 | 59 |
promonocyte | 2.67e-55 | 59 |
defensive cell | 3.22e-54 | 48 |
phagocyte | 3.22e-54 | 48 |
macrophage dendritic cell progenitor | 2.45e-53 | 61 |
myeloid lineage restricted progenitor cell | 6.13e-49 | 66 |
granulocyte monocyte progenitor cell | 3.88e-48 | 67 |
myeloid leukocyte | 1.86e-44 | 72 |
classical monocyte | 6.56e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.56e-33 | 42 |
macrophage | 9.57e-33 | 6 |
myeloid cell | 6.47e-28 | 108 |
common myeloid progenitor | 6.47e-28 | 108 |
nongranular leukocyte | 6.86e-26 | 115 |
hematopoietic lineage restricted progenitor cell | 1.38e-24 | 120 |
leukocyte | 4.68e-21 | 136 |
adult endothelial progenitor cell | 1.96e-17 | 3 |
hematopoietic oligopotent progenitor cell | 6.16e-17 | 161 |
hematopoietic multipotent progenitor cell | 6.16e-17 | 161 |
hematopoietic stem cell | 5.30e-16 | 168 |
hematopoietic cell | 6.58e-15 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.42e-42 | 76 |
immune system | 5.28e-39 | 93 |
bone element | 2.01e-38 | 82 |
skeletal element | 1.79e-37 | 90 |
hematopoietic system | 5.93e-34 | 98 |
blood island | 5.93e-34 | 98 |
skeletal system | 3.43e-33 | 100 |
hemolymphoid system | 8.02e-33 | 108 |
musculoskeletal system | 1.22e-17 | 167 |
lateral plate mesoderm | 3.94e-16 | 203 |
mesoderm | 3.95e-09 | 315 |
mesoderm-derived structure | 3.95e-09 | 315 |
presumptive mesoderm | 3.95e-09 | 315 |
cardiac chamber | 6.49e-08 | 3 |
dura mater | 8.49e-07 | 1 |
future meninx | 8.49e-07 | 1 |
ectomeninx | 8.49e-07 | 1 |
future dura mater | 8.49e-07 | 1 |