FFCP PHASE1:Hg19::chrX:70327539..70327558,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:70327539..70327558,- | |||
|coexpression_cluster_id=C746 | |coexpression_cluster_id=C746 | ||
|description=CAGE_peak_at_chrX:70327539..70327558,- | |description=CAGE_peak_at_chrX:70327539..70327558,- | ||
|id=chrX:70327539..70327558,- | |id=chrX:70327539..70327558,- | ||
|ontology_enrichment_celltype=CL:0000037!2.21e-76!172;CL:0000566!2.21e-76!172;CL:0000988!4.09e-74!182;CL:0002032!8.95e-73!165;CL:0000837!8.95e-73!165;CL:0000738!5.40e-66!140;CL:0002087!3.11e-54!119;CL:0002031!5.08e-50!124;CL:0000763!3.74e-36!112;CL:0000049!3.74e-36!112;CL:0000542!9.98e-34!53;CL:0000051!9.98e-34!53;CL:0000838!4.16e-33!52;CL:0000766!2.20e-26!76;CL:0000084!5.84e-20!25;CL:0000827!5.84e-20!25;CL:0000839!6.07e-19!70;CL:0000134!1.06e-18!358;CL:0002057!1.16e-18!42;CL:0000557!1.78e-18!71;CL:0002194!3.12e-18!63;CL:0000576!3.12e-18!63;CL:0000040!3.12e-18!63;CL:0000559!3.12e-18!63;CL:0002320!1.21e-17!365;CL:0002009!2.86e-17!65;CL:0000860!1.05e-16!45;CL:0000791!5.92e-16!18;CL:0000789!5.92e-16!18;CL:0002420!5.92e-16!18;CL:0002419!5.92e-16!18;CL:0000790!5.92e-16!18;CL:0000219!5.43e-14!390;CL:0000945!8.90e-12!24;CL:0000826!8.90e-12!24;CL:0000625!4.26e-10!11;CL:0000048!8.03e-10!430;CL:0000723!2.97e-09!436;CL:0000094!3.61e-09!8;CL:0000034!5.57e-09!444;CL:0000081!1.95e-07!11 | |ontology_enrichment_celltype=CL:0000037!2.21e-76!172;CL:0000566!2.21e-76!172;CL:0000988!4.09e-74!182;CL:0002032!8.95e-73!165;CL:0000837!8.95e-73!165;CL:0000738!5.40e-66!140;CL:0002087!3.11e-54!119;CL:0002031!5.08e-50!124;CL:0000763!3.74e-36!112;CL:0000049!3.74e-36!112;CL:0000542!9.98e-34!53;CL:0000051!9.98e-34!53;CL:0000838!4.16e-33!52;CL:0000766!2.20e-26!76;CL:0000084!5.84e-20!25;CL:0000827!5.84e-20!25;CL:0000839!6.07e-19!70;CL:0000134!1.06e-18!358;CL:0002057!1.16e-18!42;CL:0000557!1.78e-18!71;CL:0002194!3.12e-18!63;CL:0000576!3.12e-18!63;CL:0000040!3.12e-18!63;CL:0000559!3.12e-18!63;CL:0002320!1.21e-17!365;CL:0002009!2.86e-17!65;CL:0000860!1.05e-16!45;CL:0000791!5.92e-16!18;CL:0000789!5.92e-16!18;CL:0002420!5.92e-16!18;CL:0002419!5.92e-16!18;CL:0000790!5.92e-16!18;CL:0000219!5.43e-14!390;CL:0000945!8.90e-12!24;CL:0000826!8.90e-12!24;CL:0000625!4.26e-10!11;CL:0000048!8.03e-10!430;CL:0000723!2.97e-09!436;CL:0000094!3.61e-09!8;CL:0000034!5.57e-09!444;CL:0000081!1.95e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000084;6.30e-13;25!CL:0000542;9.65e-11;53!CL:0000791;1.93e-10;18!CL:0000789;1.93e-10;18!CL:0002419;1.93e-10;18!CL:0000775;5.81e-10;3!CL:0000094;3.68e-09;8!CL:0000623;1.89e-08;3!CL:0000625;2.44e-08;11!CL:0000738;6.53e-08;136!CL:0000860;4.51e-07;33!CL:0002057;4.51e-07;33!CL:0000988;7.09e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.48e-29,168;CL:0000738,2.15e-28,136;CL:0000988,6.00e-27,177;CL:0002032,1.75e-26,161;CL:0000837,1.75e-26,161;CL:0002087,5.65e-20,115;CL:0000838,3.23e-17,52;CL:0000542,8.66e-17,53;CL:0000051,8.66e-17,53;CL:0002031,2.63e-16,120;CL:0000084,2.82e-13,25;CL:0000827,2.82e-13,25;CL:0000763,3.76e-11,108;CL:0000049,3.76e-11,108;CL:0000791,8.44e-11,18;CL:0000789,8.44e-11,18;CL:0002420,8.44e-11,18;CL:0002419,8.44e-11,18;CL:0000790,8.44e-11,18;CL:0000775,4.72e-10,3;CL:0000094,3.06e-09,8;CL:0000625,1.18e-08,11;CL:0000623,2.26e-08,3;CL:0000825,2.26e-08,3;CL:0000134,6.08e-08,354;CL:0002320,1.45e-07,361;CL:0000766,1.46e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000051;9.65e-11;53!CL:0000790;1.93e-10;18 | |||
|ontology_enrichment_disease=DOID:2531!7.43e-16!51;DOID:0060083!7.43e-16!51;DOID:1240!1.94e-12!39;DOID:8692!2.20e-08!31 | |ontology_enrichment_disease=DOID:2531!7.43e-16!51;DOID:0060083!7.43e-16!51;DOID:1240!1.94e-12!39;DOID:8692!2.20e-08!31 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.75e-28!102;UBERON:0003061!2.75e-28!102;UBERON:0002193!5.42e-26!112;UBERON:0002371!1.08e-16!80;UBERON:0002384!3.24e-16!375;UBERON:0002405!8.29e-16!115;UBERON:0001474!1.53e-14!86;UBERON:0004765!2.10e-10!101;UBERON:0001434!2.10e-10!101;UBERON:0000178!2.19e-08!15;UBERON:0000179!2.19e-08!15;UBERON:0000463!2.19e-08!15;UBERON:0004177!2.98e-07!7 | |ontology_enrichment_uberon=UBERON:0002390!2.75e-28!102;UBERON:0003061!2.75e-28!102;UBERON:0002193!5.42e-26!112;UBERON:0002371!1.08e-16!80;UBERON:0002384!3.24e-16!375;UBERON:0002405!8.29e-16!115;UBERON:0001474!1.53e-14!86;UBERON:0004765!2.10e-10!101;UBERON:0001434!2.10e-10!101;UBERON:0000178!2.19e-08!15;UBERON:0000179!2.19e-08!15;UBERON:0000463!2.19e-08!15;UBERON:0004177!2.98e-07!7 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.72e-07,371 | |||
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|short_description=p@chrX:70327539..70327558,- | |short_description=p@chrX:70327539..70327558,- | ||
}} | }} |
Latest revision as of 09:19, 1 August 2015
Short description: | p@chrX:70327539..70327558, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:70327539..70327558, - |
Coexpression cluster: | C746_Neutrophils_chronic_Monocytederived_CD4_Whole_Hodgkin_lymph |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.48e-29 | 168 |
leukocyte | 2.15e-28 | 136 |
hematopoietic cell | 6.00e-27 | 177 |
hematopoietic oligopotent progenitor cell | 1.75e-26 | 161 |
hematopoietic multipotent progenitor cell | 1.75e-26 | 161 |
nongranular leukocyte | 5.65e-20 | 115 |
lymphoid lineage restricted progenitor cell | 3.23e-17 | 52 |
lymphocyte | 8.66e-17 | 53 |
common lymphoid progenitor | 8.66e-17 | 53 |
hematopoietic lineage restricted progenitor cell | 2.63e-16 | 120 |
T cell | 2.82e-13 | 25 |
pro-T cell | 2.82e-13 | 25 |
myeloid cell | 3.76e-11 | 108 |
common myeloid progenitor | 3.76e-11 | 108 |
mature alpha-beta T cell | 8.44e-11 | 18 |
alpha-beta T cell | 8.44e-11 | 18 |
immature T cell | 8.44e-11 | 18 |
mature T cell | 8.44e-11 | 18 |
immature alpha-beta T cell | 8.44e-11 | 18 |
neutrophil | 4.72e-10 | 3 |
granulocyte | 3.06e-09 | 8 |
CD8-positive, alpha-beta T cell | 1.18e-08 | 11 |
natural killer cell | 2.26e-08 | 3 |
pro-NK cell | 2.26e-08 | 3 |
mesenchymal cell | 6.08e-08 | 354 |
connective tissue cell | 1.45e-07 | 361 |
myeloid leukocyte | 1.46e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.72e-07 | 371 |