FFCP PHASE1:Mm9::chr2:118554108..118554164,-: Difference between revisions
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{{FFCP|EntrezGene=18796|HGNC=|MCL_coexpression_id=36|UniProt=|association_with_transcript=0bp_to_ENSMUST00000006415_5end|description=CAGE_peak_1_at_Plcb2_5end|id=chr2:118554108..118554164,-|ontology_enrichment_celltype=CL:0000988!3.82e-08!32;CL:0002032!3.82e-08!32;CL:0000037!3.82e-08!32;CL:0000566!3.82e-08!32;CL:0000837!3.82e-08!32|ontology_enrichment_celltype_v019_2=CL:0000988,3.08e-09,32;CL:0002032,3.08e-09,32;CL:0000037,3.08e-09,32;CL:0000837,3.08e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!2.93e-16!70;UBERON:0002193!5.00e-16!48;UBERON:0002390!1.40e-15!45;UBERON:0003061!1.40e-15!45;UBERON:0005057!2.15e-09!51;UBERON:0004177!4.18e-09!29;UBERON:0002371!1.68e-07!16;UBERON:0001474!2.36e-07!22;UBERON:0004765!2.36e-07!22;UBERON:0001434!2.36e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.92e-19,45;UBERON:0003061,2.92e-19,45;UBERON:0002193,3.36e-19,48;UBERON:0002405,3.36e-19,48;UBERON:0004177,7.85e-12,29;UBERON:0005057,7.85e-12,29;UBERON:0000077,3.81e-09,35;UBERON:0001474,7.25e-09,22;UBERON:0004765,7.25e-09,22;UBERON:0001434,7.25e-09,22;UBERON:0003408,1.40e-08,24;UBERON:0002370,1.95e-08,23;UBERON:0000974,1.95e-08,23;UBERON:0004807,1.95e-08,23;UBERON:0005058,1.95e-08,23;UBERON:0003351,1.95e-08,23;UBERON:0009113,1.95e-08,23;UBERON:0003295,1.95e-08,23;UBERON:0009722,1.95e-08,23;UBERON:0005562,1.95e-08,23;UBERON:0007690,1.95e-08,23;UBERON:0002371,3.18e-08,16;UBERON:0001041,5.28e-08,80;UBERON:0005911,7.68e-08,69;UBERON:0006562,9.30e-08,24;UBERON:0001557,9.30e-08,24;UBERON:0001042,9.30e-08,24;UBERON:0008814,9.30e-08,24;UBERON:0009145,9.30e-08,24;UBERON:0001004,9.34e-08,42;UBERON:0000065,1.39e-07,41;UBERON:0003081,3.45e-07,87;UBERON:0002204,4.00e-07,32|phase1_expression=0,0,0,0,0,3.18970616632591,3.27057696833736,21.8218416616264,4.92760527530834,4.68129052643987,2.91070545983358,3.35043067780413,29.2753248182362,31.3839244684201,3.33109761815663,3.64455481301687,1.39912375625629,12.6184866143295,10.6949258212476,6.36584477697045,2.29616883407888,0.595745707205312,0.783599367416806,1.27993938234725,0.91763712426868,0,0,1.07735616342945,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,1.1554064790051,0.166234645358492,0.408338712524738,68.220655810116,42.1921086042852,70.152181692489,77.6465564200939,75.135003345429,75.2541047198288,0,0,0,0.782391344348039,0,0,0,0,0,6.54352163625172,15.9579671242496,15.4603147605533,0,0.573066879877513,0,0.202316460859598,0,0.633831403506179,0,0,8.54904731417329,13.8441290759376,12.0781619540837,3.89480143673926,0.768436610643109,0.103689612308478,0.135005938331691,0.420649922702764,0.571301968807607,0.441737081903227,0,0.0958454710182364,0.919218786610021,0,0.766124028511126,0.46081959976873,0.131886287730194,0.365950574409639,0,0.279182999001381,0.56276261003168,0.45839474333043,1.17851434189467,0.427115042397309,0.559198337475902,0.227178579999552,0.0755715601067855,0,0.860423876981386,0,0,0.649776417447669,0.448026887097336,2.66844398250329,0,0,0,0,0,0,0,0,0,0,1.82694207550496,41.4300613835475,3.71105347662062,0.346970653532272,0.608930956624282,0,0.753613202763113,0.587943535678524,0.251333182659351,0,1.15679485535929,23.8844849026466,4.52947179852746,9.71702681225732,12.1218813283806,0,0.292780797011547,0,4.08731288333746,14.3778149407104,7.19883277192089,16.0108486112061,0.898743836428936,1.37250180845588,0,0.521472960576829,0.255715457330331,0.62336413367868,0.324482526135515,0.305518091550949,13.8091737377203,0.505445516867349,0.841767423545896,0.130120442962704,0,0.360124259610698,0.452114453507145,0.272145996605311,0.2562274405697,0.281105173679186,0,0,0,0.351902248327898,0.219195732427575,0.834141747676794,3.1342694986995,3.08673204611915,2.38841120182192,7.02213187313235,11.5806558201622,15.9131559661532,0,0.234526059981096,0,0,0.590292695242212,0.462801338662135,0.465067889500816,0.268273401399619,0.583826711835847,0.16455984991348,0.492502392237286,0.405344047729279,0.730999937126662,0.439100230582101,0.268412837520744,0.210289948564127,0.205809224758569,0.991256348951394,0.528901133327089,0.426576501070468,0.928946687441754,0.128867461322093,1.4117846723634,0.22237804384487,0.951128130562796,1.42358718463353,0.494096864172033,0.754005626400808,1.1937388322469,0.974820435595601,3.59527763461689,2.80979464837102,0.995706366271836,0.189667900953082,0.342745537829186,0,0,0.581857461502877,0.631222379012867,1.20149420536089,0.590440591918409,1.41298855057237,0.493588655687202,2.37162101669719,0.83422552858047,2.35870794135844,2.69834534861824,3.65148218499305,6.75296047306767,5.0925170356284,6.90470729881945,5.5125977103512,1.64736847912849,1.43768206527355,4.09355042435354,2.49630138491648,2.27320990152401,1.61457672169721,0.964887042726734,7.7596339869974,0.189491411770485,0.162964976442026,0.848725428875941,0.469380496577004,2.01007508930179,1.6663054862021,1.56106918286239,5.83250033192907,3.76489972402917,5.10255259703959,7.70157579163969,9.67035898449015,7.37710198765709,25.634518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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18796 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000006415_5end | |||
|cluster_id=chr2:118554108..118554164,- | |||
|description=CAGE_peak_1_at_Plcb2_5end | |||
|id=chr2:118554108..118554164,- | |||
|ontology_enrichment_celltype=CL:0000988!3.82e-08!32;CL:0002032!3.82e-08!32;CL:0000037!3.82e-08!32;CL:0000566!3.82e-08!32;CL:0000837!3.82e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.08e-09,32;CL:0002032,3.08e-09,32;CL:0000037,3.08e-09,32;CL:0000837,3.08e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.93e-16!70;UBERON:0002193!5.00e-16!48;UBERON:0002390!1.40e-15!45;UBERON:0003061!1.40e-15!45;UBERON:0005057!2.15e-09!51;UBERON:0004177!4.18e-09!29;UBERON:0002371!1.68e-07!16;UBERON:0001474!2.36e-07!22;UBERON:0004765!2.36e-07!22;UBERON:0001434!2.36e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.92e-19,45;UBERON:0003061,2.92e-19,45;UBERON:0002193,3.36e-19,48;UBERON:0002405,3.36e-19,48;UBERON:0004177,7.85e-12,29;UBERON:0005057,7.85e-12,29;UBERON:0000077,3.81e-09,35;UBERON:0001474,7.25e-09,22;UBERON:0004765,7.25e-09,22;UBERON:0001434,7.25e-09,22;UBERON:0003408,1.40e-08,24;UBERON:0002370,1.95e-08,23;UBERON:0000974,1.95e-08,23;UBERON:0004807,1.95e-08,23;UBERON:0005058,1.95e-08,23;UBERON:0003351,1.95e-08,23;UBERON:0009113,1.95e-08,23;UBERON:0003295,1.95e-08,23;UBERON:0009722,1.95e-08,23;UBERON:0005562,1.95e-08,23;UBERON:0007690,1.95e-08,23;UBERON:0002371,3.18e-08,16;UBERON:0001041,5.28e-08,80;UBERON:0005911,7.68e-08,69;UBERON:0006562,9.30e-08,24;UBERON:0001557,9.30e-08,24;UBERON:0001042,9.30e-08,24;UBERON:0008814,9.30e-08,24;UBERON:0009145,9.30e-08,24;UBERON:0001004,9.34e-08,42;UBERON:0000065,1.39e-07,41;UBERON:0003081,3.45e-07,87;UBERON:0002204,4.00e-07,32 | |||
|phase1_expression=0,0,0,0,0,3.18970616632591,3.27057696833736,21.8218416616264,4.92760527530834,4.68129052643987,2.91070545983358,3.35043067780413,29.2753248182362,31.3839244684201,3.33109761815663,3.64455481301687,1.39912375625629,12.6184866143295,10.6949258212476,6.36584477697045,2.29616883407888,0.595745707205312,0.783599367416806,1.27993938234725,0.91763712426868,0,0,1.07735616342945,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,1.1554064790051,0.166234645358492,0.408338712524738,68.220655810116,42.1921086042852,70.152181692489,77.6465564200939,75.135003345429,75.2541047198288,0,0,0,0.782391344348039,0,0,0,0,0,6.54352163625172,15.9579671242496,15.4603147605533,0,0.573066879877513,0,0.202316460859598,0,0.633831403506179,0,0,8.54904731417329,13.8441290759376,12.0781619540837,3.89480143673926,0.768436610643109,0.103689612308478,0.135005938331691,0.420649922702764,0.571301968807607,0.441737081903227,0,0.0958454710182364,0.919218786610021,0,0.766124028511126,0.46081959976873,0.131886287730194,0.365950574409639,0,0.279182999001381,0.56276261003168,0.45839474333043,1.17851434189467,0.427115042397309,0.559198337475902,0.227178579999552,0.0755715601067855,0,0.860423876981386,0,0,0.649776417447669,0.448026887097336,2.66844398250329,0,0,0,0,0,0,0,0,0,0,1.82694207550496,41.4300613835475,3.71105347662062,0.346970653532272,0.608930956624282,0,0.753613202763113,0.587943535678524,0.251333182659351,0,1.15679485535929,23.8844849026466,4.52947179852746,9.71702681225732,12.1218813283806,0,0.292780797011547,0,4.08731288333746,14.3778149407104,7.19883277192089,16.0108486112061,0.898743836428936,1.37250180845588,0,0.521472960576829,0.255715457330331,0.62336413367868,0.324482526135515,0.305518091550949,13.8091737377203,0.505445516867349,0.841767423545896,0.130120442962704,0,0.360124259610698,0.452114453507145,0.272145996605311,0.2562274405697,0.281105173679186,0,0,0,0.351902248327898,0.219195732427575,0.834141747676794,3.1342694986995,3.08673204611915,2.38841120182192,7.02213187313235,11.5806558201622,15.9131559661532,0,0.234526059981096,0,0,0.590292695242212,0.462801338662135,0.465067889500816,0.268273401399619,0.583826711835847,0.16455984991348,0.492502392237286,0.405344047729279,0.730999937126662,0.439100230582101,0.268412837520744,0.210289948564127,0.205809224758569,0.991256348951394,0.528901133327089,0.426576501070468,0.928946687441754,0.128867461322093,1.4117846723634,0.22237804384487,0.951128130562796,1.42358718463353,0.494096864172033,0.754005626400808,1.1937388322469,0.974820435595601,3.59527763461689,2.80979464837102,0.995706366271836,0.189667900953082,0.342745537829186,0,0,0.581857461502877,0.631222379012867,1.20149420536089,0.590440591918409,1.41298855057237,0.493588655687202,2.37162101669719,0.83422552858047,2.35870794135844,2.69834534861824,3.65148218499305,6.75296047306767,5.0925170356284,6.90470729881945,5.5125977103512,1.64736847912849,1.43768206527355,4.09355042435354,2.49630138491648,2.27320990152401,1.61457672169721,0.964887042726734,7.7596339869974,0.189491411770485,0.162964976442026,0.848725428875941,0.469380496577004,2.01007508930179,1.6663054862021,1.56106918286239,5.83250033192907,3.76489972402917,5.10255259703959,7.70157579163969,9.67035898449015,7.37710198765709,25.6345182696763,16.3171705145613,1.47529281905711,1.93155722413313,0.642202359951168,0.35163505977661,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0.642642632843614,1.27746076687442,0.178065603667255,1.46598263418218,3.95928295134085,1.32745138339963,0.242780636154981,0.302323556964751,0.943025398779491,0.295301892880773,0,0.258428293168221,0.727067458955011,0.356497378384721,1.58018378967908,1.05418608574999,1.03135543248187,0.340439605753788,0,0.129358683782755,0.643011105094777,0,0,0.329098041204242,0,0.23467170806371,0.847328283455281,0.661585194164886,1.6488625294148,2.42196640043858,1.26657142349127,0.835606408021955,0.984845398470368,2.04036585640896,0.927126510052548,12.4735742982432,5.36605856704379,12.7784223885101,9.41842285023455,10.66214976224,8.69357058184786,29.406268388937,31.2091738681757,26.1197950490361,0,0.316335993581135,0.609958401380546,0.648032044930808,0.418176592028937,0,0.674321731924103,0.826534557253359,0.785267825952089,1.03691978633434,1.86401793926078,0.56369293868419,1.04661582230785,1.15820943319968,0.194451188344048,0.387479470433193,1.18269287843545,0.117357238645754,0.13020438484395,0.209718688851422,0,0,12.324433704499,2.02725215290164,4.31386020092274,5.1968329191118,3.04345382634718,4.56967115996909,6.25016337503838,7.82754494025259,6.25991989678515,5.48689007915999,8.87270429204197,11.5000299272908,9.62118416403295,10.9864288050675,0.453460767230423,0,0,0,1.35232715822533,1.31377732815827,2.56412273974171,1.2862102744744,1.00314420807073,0,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0,0,0.906284817968409,0,0.103787347584177,0,0.512200817262403,1.94485373654635,0.628839487883947,1.10306105070008,1.11123363900808,1.03017528619447,1.60459604795908,1.51618327058278,2.28131369901216,3.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| |||
|short_description=p1@Plcb2 | |||
}} |
Revision as of 20:03, 3 August 2015
Short description: | p1@Plcb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Plcb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000006415_5end |
EntrezGene: | 18796 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.08e-09 | 32 |
hematopoietic oligopotent progenitor cell | 3.08e-09 | 32 |
hematopoietic stem cell | 3.08e-09 | 32 |
hematopoietic multipotent progenitor cell | 3.08e-09 | 32 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.92e-19 | 45 |
blood island | 2.92e-19 | 45 |
hemolymphoid system | 3.36e-19 | 48 |
immune system | 3.36e-19 | 48 |
hemopoietic organ | 7.85e-12 | 29 |
immune organ | 7.85e-12 | 29 |
mixed endoderm/mesoderm-derived structure | 3.81e-09 | 35 |
bone element | 7.25e-09 | 22 |
skeletal element | 7.25e-09 | 22 |
skeletal system | 7.25e-09 | 22 |
gland of gut | 1.40e-08 | 24 |
thymus | 1.95e-08 | 23 |
neck | 1.95e-08 | 23 |
respiratory system epithelium | 1.95e-08 | 23 |
hemolymphoid system gland | 1.95e-08 | 23 |
pharyngeal epithelium | 1.95e-08 | 23 |
thymic region | 1.95e-08 | 23 |
pharyngeal gland | 1.95e-08 | 23 |
entire pharyngeal arch endoderm | 1.95e-08 | 23 |
thymus primordium | 1.95e-08 | 23 |
early pharyngeal endoderm | 1.95e-08 | 23 |
bone marrow | 3.18e-08 | 16 |
foregut | 5.28e-08 | 80 |
endo-epithelium | 7.68e-08 | 69 |
pharynx | 9.30e-08 | 24 |
upper respiratory tract | 9.30e-08 | 24 |
chordate pharynx | 9.30e-08 | 24 |
pharyngeal arch system | 9.30e-08 | 24 |
pharyngeal region of foregut | 9.30e-08 | 24 |
respiratory system | 9.34e-08 | 42 |
respiratory tract | 1.39e-07 | 41 |
lateral plate mesoderm | 3.45e-07 | 87 |
musculoskeletal system | 4.00e-07 | 32 |