FFCP PHASE1:Mm9::chr3:5219025..5219036,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=5 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:5219025..5219036,+ | |||
|description=CAGE_peak_at_chr3:5219025..5219036,+ | |description=CAGE_peak_at_chr3:5219025..5219036,+ | ||
|id=chr3:5219025..5219036,+ | |id=chr3:5219025..5219036,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.99e-19,5;CL:0000213,4.83e-07,1;CL:0002078,4.83e-07,1;CL:0000115,4.83e-07,1;CL:0002262,4.83e-07,1;CL:1000398,4.83e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.22e-24!22;UBERON:0007499!8.22e-24!22;UBERON:0006925!8.22e-24!22;UBERON:0009497!8.22e-24!22;UBERON:0000015!8.22e-24!22;UBERON:0002423!8.22e-24!22;UBERON:0006235!8.22e-24!22;UBERON:0008835!8.22e-24!22;UBERON:0003894!8.22e-24!22;UBERON:0004161!8.22e-24!22;UBERON:0008836!8.22e-24!22;UBERON:0009854!1.77e-22!23;UBERON:0009856!1.77e-22!23;UBERON:0002365!3.87e-20!25;UBERON:0002330!3.87e-20!25;UBERON:0005256!1.27e-10!47;UBERON:0003914!1.40e-09!47;UBERON:0005172!5.77e-09!49;UBERON:0005173!5.77e-09!49;UBERON:0002417!5.77e-09!49;UBERON:0000916!5.77e-09!49;UBERON:0002368!1.63e-07!60;UBERON:0005057!1.91e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.58e-51,22;UBERON:0007499,3.58e-51,22;UBERON:0006925,3.58e-51,22;UBERON:0009497,3.58e-51,22;UBERON:0000015,3.58e-51,22;UBERON:0002423,3.58e-51,22;UBERON:0006235,3.58e-51,22;UBERON:0008835,3.58e-51,22;UBERON:0003894,3.58e-51,22;UBERON:0004161,3.58e-51,22;UBERON:0008836,3.58e-51,22;UBERON:0009854,6.83e-49,23;UBERON:0009856,6.83e-49,23;UBERON:0002365,7.09e-45,25;UBERON:0002330,7.09e-45,25;UBERON:0005256,2.62e-24,45;UBERON:0003914,3.27e-23,47;UBERON:0005172,3.34e-22,49;UBERON:0005173,3.34e-22,49;UBERON:0002417,3.34e-22,49;UBERON:0000916,3.34e-22,49;UBERON:0003929,1.29e-19,55;UBERON:0002368,7.47e-18,60;UBERON:0003104,1.55e-17,61;UBERON:0009142,1.55e-17,61;UBERON:0002530,2.33e-16,65;UBERON:0000490,4.35e-16,66;UBERON:0009569,4.35e-16,66;UBERON:0005911,2.55e-15,69;UBERON:0000949,1.29e-14,72;UBERON:0005177,3.56e-13,79;UBERON:0001041,5.45e-13,80;UBERON:0002100,2.31e-11,90;UBERON:0000025,1.32e-08,114;UBERON:0004921,1.32e-08,114;UBERON:0001007,1.99e-08,116;UBERON:0001555,1.99e-08,116;UBERON:0007026,1.99e-08,116;UBERON:0004119,2.97e-08,118;UBERON:0000925,2.97e-08,118;UBERON:0006595,2.97e-08,118;UBERON:0004111,6.33e-08,122;UBERON:0001048,4.72e-07,134;UBERON:0002394,4.83e-07,1;UBERON:0001281,4.83e-07,1;UBERON:0000353,4.83e-07,1;UBERON:0003497,4.83e-07,1;UBERON:0003909,4.83e-07,1;UBERON:0003928,4.83e-07,1;UBERON:0003835,4.83e-07,1;UBERON:0003513,4.83e-07,1;UBERON:0001280,4.83e-07,1;UBERON:0004647,4.83e-07,1;UBERON:0002294,4.83e-07,1;UBERON:0001173,4.83e-07,1;UBERON:0004912,4.83e-07,1;UBERON:0005171,4.83e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,1.10115880999389,0.127687338085188,0,0.131886287730194,0,0,0,0,0.30559649555362,0,0,0,0,0,1.73918693221007,0.860423876981386,0,3.2382191498269,4.54843492213368,1.79210754838934,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0.260240885925407,0,0.180062129805349,0.60281927134286,0,0,0,0,0,0.189106080167819,0,0.219195732427575,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07516838961004,0.500535317148282,0.196558995113203,0.224862112384854,0,0.241177159752417,1.01850340712568,1.43848068725405,0.162135226775035,1.64736847912849,12.9391385874619,2.23284568601102,4.05648975048929,3.28352541331245,6.09951205974501,3.85954817090694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0.322928853391811,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.207574695168353,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0.50695859978048,0,0.187283014939765,0.192075457214608,0.287177344778066,0.476293691283074,0.115884325944855,0.38581844092741,0,0.441596760403192,0,0,0.238436189947321,0.436039249896986,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.271608227691724,0,0.355905054372522,0,0,0.464810523557898,0,0,0.233931608445408,0.214871054048298,0.382576664137687,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,1.10115880999389,0.127687338085188,0,0.131886287730194,0,0,0,0,0.30559649555362,0,0,0,0,0,1.73918693221007,0.860423876981386,0,3.2382191498269,4.54843492213368,1.79210754838934,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0.260240885925407,0,0.180062129805349,0.60281927134286,0,0,0,0,0,0.189106080167819,0,0.219195732427575,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07516838961004,0.500535317148282,0.196558995113203,0.224862112384854,0,0.241177159752417,1.01850340712568,1.43848068725405,0.162135226775035,1.64736847912849,12.9391385874619,2.23284568601102,4.05648975048929,3.28352541331245,6.09951205974501,3.85954817090694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0.322928853391811,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.207574695168353,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0.50695859978048,0,0.187283014939765,0.192075457214608,0.287177344778066,0.476293691283074,0.115884325944855,0.38581844092741,0,0.441596760403192,0,0,0.238436189947321,0.436039249896986,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.271608227691724,0,0.355905054372522,0,0,0.464810523557898,0,0,0.233931608445408,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p@chr3:5219025..5219036,+ | |short_description=p@chr3:5219025..5219036,+ | ||
}} | }} |
Latest revision as of 20:37, 3 August 2015
Short description: | p@chr3:5219025..5219036, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:5219025..5219036, + |
Coexpression cluster: | MCL_coexpression_mm9:5 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.99e-19 | 5 |
lining cell | 4.83e-07 | 1 |
meso-epithelial cell | 4.83e-07 | 1 |
endothelial cell | 4.83e-07 | 1 |
endothelial cell of sinusoid | 4.83e-07 | 1 |
endothelial cell of hepatic sinusoid | 4.83e-07 | 1 |