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FFCP PHASE1:Mm9::chr5:143734523..143734549,+: Difference between revisions

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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1814|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:143734523..143734549,+|id=chr5:143734523..143734549,+|ontology_enrichment_celltype=CL:0000055!2.93e-14!50;CL:0002319!6.72e-11!43;CL:0000221!1.45e-10!44;CL:0000133!1.45e-10!44;CL:0000393!9.63e-10!39;CL:0000211!9.63e-10!39;CL:0000540!6.04e-07!33;CL:0000047!6.04e-07!33;CL:0000031!6.04e-07!33;CL:0000404!6.04e-07!33|ontology_enrichment_celltype_v019_2=CL:0002453,9.25e-09,8;CL:0002319,1.97e-07,43;CL:0000221,3.82e-07,44;CL:0000133,3.82e-07,44;CL:0002321,4.48e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.36e-14!73;UBERON:0005743!3.36e-14!73;UBERON:0000073!3.44e-14!75;UBERON:0001016!3.44e-14!75;UBERON:0004121!3.54e-12!102;UBERON:0000924!3.54e-12!102;UBERON:0006601!3.54e-12!102;UBERON:0002346!1.55e-10!71;UBERON:0003075!1.55e-10!71;UBERON:0007284!1.55e-10!71;UBERON:0001049!1.39e-08!52;UBERON:0005068!1.39e-08!52;UBERON:0006241!1.39e-08!52;UBERON:0007135!1.39e-08!52;UBERON:0003056!1.30e-07!49;UBERON:0000955!2.63e-07!50;UBERON:0006238!2.63e-07!50;UBERON:0000033!3.48e-07!63;UBERON:0002020!3.59e-07!34;UBERON:0002616!3.72e-07!49;UBERON:0002780!9.26e-07!39;UBERON:0001890!9.26e-07!39;UBERON:0006240!9.26e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.58e-10,73;UBERON:0001016,8.30e-10,75;UBERON:0002346,1.24e-07,64;UBERON:0003075,1.24e-07,64;UBERON:0007284,1.24e-07,64;UBERON:0004121,3.00e-07,95;UBERON:0000924,3.00e-07,95;UBERON:0006601,3.00e-07,95;UBERON:0002616,4.05e-07,46;UBERON:0001049,4.33e-07,52;UBERON:0005068,4.33e-07,52;UBERON:0006241,4.33e-07,52;UBERON:0007135,4.33e-07,52;UBERON:0000955,7.43e-07,47;UBERON:0006238,7.43e-07,47|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42073771675444,9.93493925951243,3.12029478674859,2.34717403304412,5.66865406589161,1.09843091367236,2.13872888981712,0.979904951377538,2.87505128729943,0,0,0,2.05807548828758,0.573066879877513,1.54701627683233,1.41621522601718,2.11596391708813,0.633831403506179,1.69422266034566,0.889294796111139,0,1.97773272513395,0,2.99600110518405,4.99483796918021,1.14058573539325,0.945041568321835,0.841299845405528,0.856952953211411,1.10434270475807,0.979926393719632,1.0543001812006,0,0,0.893811366596314,0.153606533256243,1.05509030184155,1.64677758484337,2.08365348222704,0.558365998002762,0,0.45839474333043,0.883885756421003,1.28134512719193,0.372798891650601,0.37863096666592,0.377857800533928,0,0.860423876981386,0,0,0,0,0.280888840263504,0.852151612890289,1.03914401841148,1.7666978725517,0.14084341977668,1.28326477414318,0,0,1.29894624606728,0.253359865475099,0.505524445014783,0,0,0.148442139064825,1.38788261412909,0,0.230615497256059,0.753613202763113,1.05829836422134,0,0.247194967734374,0,0,0.161766849947409,0.662524555381181,0,0,0,1.67557365450764,0.510914110417183,0,0,0,0.149790639404823,0.457500602818626,1.63350657746724,0.521472960576829,0.255715457330331,0.20778804455956,0.648965052271031,0.916554274652847,0.497627882440372,0,0,2.08192708740326,0.919608417733892,1.0803727788321,0.60281927134286,0.748401490664606,0.384341160854549,0.937017245597288,0.258703370739016,4.095791865724,0.567318240503458,1.75951124163949,1.7535658594206,1.39023624612799,0.696504333044333,0.61734640922383,0.59710280045548,0,0,0,1.44988040774851,0.234526059981096,1.2604344302271,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0.134206418760372,0,1.02904612379284,0,0,1.2797295032114,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0.949058123089023,0.164698954724011,0.754005626400808,0,0.38992817423824,0,0,0,3.79335801906163,0.571242563048644,0,0.407302655690628,0.775809948670503,0.280543279561274,0.252946148497029,0,0,0.123397163921801,0,0.667380422864376,0,0,0,0.241177159752417,0,0,0.486405680325106,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0.947457058852424,0.488894929326078,0.169745085775188,0.469380496577004,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0.491764273019036,0,0.321101179975584,0.703270119553219,0.655739781506702,0.252470927204373,2.83957397474631,0.780877488593277,1.72338718186239,0.716906393857656,0.891194696329576,0.849229592366497,0.404810701674894,3.21481443702443,1.58115111178609,0.642642632843614,0.141940085208269,0.890328018336276,1.30309567482861,0.164970122972535,0,1.21390318077491,0.302323556964751,0.565815239267694,0.295301892880773,0,0.516856586336442,0.363533729477506,0.356497378384721,0,0,1.03135543248187,0,1.98067203434441,2.58717367565509,1.71469628025274,0.532020700926821,0.713475270408282,0.658196082408484,0,1.87737366450968,2.33015277950202,0,0,0,0.301564624640779,0.238744688006273,0.164140899745061,0.291480836629851,0.18542530201051,0,2.27025554759545,0.740778109478847,0.188368457004691,0,0,0,0,0,0,1.42351197111511,0.203319467126849,0,0,0.218362563746178,0.809186078308924,0.0826534557253359,0,0.129614973291793,0,0,1.79419855252775,0.165458490457098,0.194451188344048,0.387479470433193,0.337912250981556,0.469428954583016,0,0.314578033277133,0.241584120826006,0,0.316011120628178,1.41907650703115,0.616265742988964,0.129920822977795,0.179026695667481,0,0.360586348559907,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0.769694733122636,0.116876902181569,0,0.443971906748129,0.538283139656854,1.17519231454855,0.386379188064381,0,0.549454872801795,0,0,1.6942555278512,1.38097570952153,1.71868654031819,2.40594455281163,0,1.5107877947794,2.02506750069542,0.45032120322422,0.453142408984205,0.51776031175182,1.03787347584177,1.59609949360412,1.53660245178721,1.45864030240976,0.419226325255965,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0.448176066834085,0.459483751644906,0,0.231768651889711,0.578727661391115,0.412085900803307,2.06078488188156,0.685738504770831,0.532427418478012,0.715308569841963,0.290692833264657,0.752875043322645,0.338458431566706,0.182927972872773,0.526139422875686,0.135804113845862,0,0.118635018124174,0.394017929502254,0.409231043169689,0.77468420592983,0,1.24905288968973,0.467863216890817,0.644613162144895,1.72159498861959,0.882365676478062,0.695603506861264|short_description=p@chr5:143734523..143734549,+}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=1814
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr5:143734523..143734549,+
|description=CAGE_peak_at_chr5:143734523..143734549,+
|id=chr5:143734523..143734549,+
|ontology_enrichment_celltype=CL:0000055!2.93e-14!50;CL:0002319!6.72e-11!43;CL:0000221!1.45e-10!44;CL:0000133!1.45e-10!44;CL:0000393!9.63e-10!39;CL:0000211!9.63e-10!39;CL:0000540!6.04e-07!33;CL:0000047!6.04e-07!33;CL:0000031!6.04e-07!33;CL:0000404!6.04e-07!33
|ontology_enrichment_celltype_v019_2=CL:0002453,9.25e-09,8;CL:0002319,1.97e-07,43;CL:0000221,3.82e-07,44;CL:0000133,3.82e-07,44;CL:0002321,4.48e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.36e-14!73;UBERON:0005743!3.36e-14!73;UBERON:0000073!3.44e-14!75;UBERON:0001016!3.44e-14!75;UBERON:0004121!3.54e-12!102;UBERON:0000924!3.54e-12!102;UBERON:0006601!3.54e-12!102;UBERON:0002346!1.55e-10!71;UBERON:0003075!1.55e-10!71;UBERON:0007284!1.55e-10!71;UBERON:0001049!1.39e-08!52;UBERON:0005068!1.39e-08!52;UBERON:0006241!1.39e-08!52;UBERON:0007135!1.39e-08!52;UBERON:0003056!1.30e-07!49;UBERON:0000955!2.63e-07!50;UBERON:0006238!2.63e-07!50;UBERON:0000033!3.48e-07!63;UBERON:0002020!3.59e-07!34;UBERON:0002616!3.72e-07!49;UBERON:0002780!9.26e-07!39;UBERON:0001890!9.26e-07!39;UBERON:0006240!9.26e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.58e-10,73;UBERON:0001016,8.30e-10,75;UBERON:0002346,1.24e-07,64;UBERON:0003075,1.24e-07,64;UBERON:0007284,1.24e-07,64;UBERON:0004121,3.00e-07,95;UBERON:0000924,3.00e-07,95;UBERON:0006601,3.00e-07,95;UBERON:0002616,4.05e-07,46;UBERON:0001049,4.33e-07,52;UBERON:0005068,4.33e-07,52;UBERON:0006241,4.33e-07,52;UBERON:0007135,4.33e-07,52;UBERON:0000955,7.43e-07,47;UBERON:0006238,7.43e-07,47
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42073771675444,9.93493925951243,3.12029478674859,2.34717403304412,5.66865406589161,1.09843091367236,2.13872888981712,0.979904951377538,2.87505128729943,0,0,0,2.05807548828758,0.573066879877513,1.54701627683233,1.41621522601718,2.11596391708813,0.633831403506179,1.69422266034566,0.889294796111139,0,1.97773272513395,0,2.99600110518405,4.99483796918021,1.14058573539325,0.945041568321835,0.841299845405528,0.856952953211411,1.10434270475807,0.979926393719632,1.0543001812006,0,0,0.893811366596314,0.153606533256243,1.05509030184155,1.64677758484337,2.08365348222704,0.558365998002762,0,0.45839474333043,0.883885756421003,1.28134512719193,0.372798891650601,0.37863096666592,0.377857800533928,0,0.860423876981386,0,0,0,0,0.280888840263504,0.852151612890289,1.03914401841148,1.7666978725517,0.14084341977668,1.28326477414318,0,0,1.29894624606728,0.253359865475099,0.505524445014783,0,0,0.148442139064825,1.38788261412909,0,0.230615497256059,0.753613202763113,1.05829836422134,0,0.247194967734374,0,0,0.161766849947409,0.662524555381181,0,0,0,1.67557365450764,0.510914110417183,0,0,0,0.149790639404823,0.457500602818626,1.63350657746724,0.521472960576829,0.255715457330331,0.20778804455956,0.648965052271031,0.916554274652847,0.497627882440372,0,0,2.08192708740326,0.919608417733892,1.0803727788321,0.60281927134286,0.748401490664606,0.384341160854549,0.937017245597288,0.258703370739016,4.095791865724,0.567318240503458,1.75951124163949,1.7535658594206,1.39023624612799,0.696504333044333,0.61734640922383,0.59710280045548,0,0,0,1.44988040774851,0.234526059981096,1.2604344302271,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0.134206418760372,0,1.02904612379284,0,0,1.2797295032114,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0.949058123089023,0.164698954724011,0.754005626400808,0,0.38992817423824,0,0,0,3.79335801906163,0.571242563048644,0,0.407302655690628,0.775809948670503,0.280543279561274,0.252946148497029,0,0,0.123397163921801,0,0.667380422864376,0,0,0,0.241177159752417,0,0,0.486405680325106,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0.947457058852424,0.488894929326078,0.169745085775188,0.469380496577004,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0.491764273019036,0,0.321101179975584,0.703270119553219,0.655739781506702,0.252470927204373,2.83957397474631,0.780877488593277,1.72338718186239,0.716906393857656,0.891194696329576,0.849229592366497,0.404810701674894,3.21481443702443,1.58115111178609,0.642642632843614,0.141940085208269,0.890328018336276,1.30309567482861,0.164970122972535,0,1.21390318077491,0.302323556964751,0.565815239267694,0.295301892880773,0,0.516856586336442,0.363533729477506,0.356497378384721,0,0,1.03135543248187,0,1.98067203434441,2.58717367565509,1.71469628025274,0.532020700926821,0.713475270408282,0.658196082408484,0,1.87737366450968,2.33015277950202,0,0,0,0.301564624640779,0.238744688006273,0.164140899745061,0.291480836629851,0.18542530201051,0,2.27025554759545,0.740778109478847,0.188368457004691,0,0,0,0,0,0,1.42351197111511,0.203319467126849,0,0,0.218362563746178,0.809186078308924,0.0826534557253359,0,0.129614973291793,0,0,1.79419855252775,0.165458490457098,0.194451188344048,0.387479470433193,0.337912250981556,0.469428954583016,0,0.314578033277133,0.241584120826006,0,0.316011120628178,1.41907650703115,0.616265742988964,0.129920822977795,0.179026695667481,0,0.360586348559907,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0.769694733122636,0.116876902181569,0,0.443971906748129,0.538283139656854,1.17519231454855,0.386379188064381,0,0.549454872801795,0,0,1.6942555278512,1.38097570952153,1.71868654031819,2.40594455281163,0,1.5107877947794,2.02506750069542,0.45032120322422,0.453142408984205,0.51776031175182,1.03787347584177,1.59609949360412,1.53660245178721,1.45864030240976,0.419226325255965,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0.448176066834085,0.459483751644906,0,0.231768651889711,0.578727661391115,0.412085900803307,2.06078488188156,0.685738504770831,0.532427418478012,0.715308569841963,0.290692833264657,0.752875043322645,0.338458431566706,0.182927972872773,0.526139422875686,0.135804113845862,0,0.118635018124174,0.394017929502254,0.409231043169689,0.77468420592983,0,1.24905288968973,0.467863216890817,0.644613162144895,1.72159498861959,0.882365676478062,0.695603506861264
|short_description=p@chr5:143734523..143734549,+
}}

Latest revision as of 00:29, 4 August 2015

Short description:p@chr5:143734523..143734549, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr5:143734523..143734549, +
Coexpression cluster:MCL_coexpression_mm9:1814
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr5:143734523..143734549+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.42
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D99.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.12
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.67
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E24.10
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I93.79
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
oligodendrocyte precursor cell9.25e-098
neural cell1.97e-0743
ectodermal cell3.82e-0744
neurectodermal cell3.82e-0744
embryonic cell4.48e-0770

Uber anatomy
Ontology termp-valuen
central nervous system2.58e-1073
nervous system8.30e-1075
neurectoderm1.24e-0764
neural plate1.24e-0764
presumptive neural plate1.24e-0764
ectoderm-derived structure3.00e-0795
ectoderm3.00e-0795
presumptive ectoderm3.00e-0795
regional part of brain4.05e-0746
neural tube4.33e-0752
neural rod4.33e-0752
future spinal cord4.33e-0752
neural keel4.33e-0752
brain7.43e-0747
future brain7.43e-0747
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