FFCP PHASE1:Mm9::chr2:13715538..13715547,-: Difference between revisions
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{{FFCP|EntrezGene=241230|HGNC=|UniProt=Q8K4T1,Q8BI43|association_with_transcript=-103bp_to_ENSMUST00000003509,ENSMUST00000170090_5end|description=CAGE_peak_8_at_St8sia6_5end|id=chr2:13715538..13715547,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000815,2.59e-18,1;CL:0000792,2.59e-18,1;CL:0000624,1.08e-09,8;CL:0000791,1.00e-08,9;CL:0000789,1.00e-08,9;CL:0002420,1.00e-08,9;CL:0002419,1.00e-08,9;CL:0000790,1.00e-08,9;CL:0000084,2.59e-07,11;CL:0000827,2.59e-07,11;CL:0000838,8.83e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001255,5.15e-19,1;UBERON:0001556,5.15e-19,1;UBERON:0000162,3.18e-07,3;UBERON:0001353,3.18e-07,3;UBERON:0000163,3.18e-07,3;UBERON:0006866,3.18e-07,3;UBERON:0001046,3.18e-07,3;UBERON:0000164,3.18e-07,3;UBERON:0000931,3.18e-07,3;UBERON:0001301,4.17e-07,3;UBERON:0006555,4.17e-07,3;UBERON:0005103,4.17e-07,3;UBERON:0000083,4.17e-07,3;UBERON:0009201,4.17e-07,3;UBERON:0004819,4.17e-07,3;UBERON:0006553,4.17e-07,3;UBERON:0003074,4.17e-07,3;UBERON:0003060,4.17e-07,3|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0.422366166455,0,0,0,0.342401459862411,1.66098764596095,0,0,0,0.630924330716475,0.137114433605739,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.506719730950197,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0.324482526135515,0,0.373220911830279,1.51633655060205,1.26265113531884,0,0,0,0,0,0.2562274405697,0.0937017245597288,0.776110112217047,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0,0,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238744688006273,0.492422699235184,0.291480836629851,0,0,0,0,0,0.136694227721025,0.457556346413045,0,0,0,0,0,0,0,0,0,0.134864346384821,0.41326727862668,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0,0,1.73870634628971,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0|short_description=p8@St8sia6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:241230 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8K4T1,uniprot:Q8BI43 | |||
|association_with_transcript=-103bp_to_ENSMUST00000003509,ENSMUST00000170090_5end | |||
|cluster_id=chr2:13715538..13715547,- | |||
|description=CAGE_peak_8_at_St8sia6_5end | |||
|id=chr2:13715538..13715547,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,2.59e-18,1;CL:0000792,2.59e-18,1;CL:0000624,1.08e-09,8;CL:0000791,1.00e-08,9;CL:0000789,1.00e-08,9;CL:0002420,1.00e-08,9;CL:0002419,1.00e-08,9;CL:0000790,1.00e-08,9;CL:0000084,2.59e-07,11;CL:0000827,2.59e-07,11;CL:0000838,8.83e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001255,5.15e-19,1;UBERON:0001556,5.15e-19,1;UBERON:0000162,3.18e-07,3;UBERON:0001353,3.18e-07,3;UBERON:0000163,3.18e-07,3;UBERON:0006866,3.18e-07,3;UBERON:0001046,3.18e-07,3;UBERON:0000164,3.18e-07,3;UBERON:0000931,3.18e-07,3;UBERON:0001301,4.17e-07,3;UBERON:0006555,4.17e-07,3;UBERON:0005103,4.17e-07,3;UBERON:0000083,4.17e-07,3;UBERON:0009201,4.17e-07,3;UBERON:0004819,4.17e-07,3;UBERON:0006553,4.17e-07,3;UBERON:0003074,4.17e-07,3;UBERON:0003060,4.17e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0.422366166455,0,0,0,0.342401459862411,1.66098764596095,0,0,0,0.630924330716475,0.137114433605739,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.506719730950197,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0.324482526135515,0,0.373220911830279,1.51633655060205,1.26265113531884,0,0,0,0,0,0.2562274405697,0.0937017245597288,0.776110112217047,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0,0,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238744688006273,0.492422699235184,0.291480836629851,0,0,0,0,0,0.136694227721025,0.457556346413045,0,0,0,0,0,0,0,0,0,0.134864346384821,0.41326727862668,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0,0,1.73870634628971,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p8@St8sia6 | |||
}} |
Revision as of 03:57, 4 August 2015
Short description: | p8@St8sia6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_St8sia6_5end |
Coexpression cluster: | NA |
Association with transcript: | -103bp_to_ENSMUST00000003509, ENSMUST00000170090_5end |
EntrezGene: | 241230 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 2.59e-18 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.59e-18 | 1 |
CD4-positive, alpha-beta T cell | 1.08e-09 | 8 |
mature alpha-beta T cell | 1.00e-08 | 9 |
alpha-beta T cell | 1.00e-08 | 9 |
immature T cell | 1.00e-08 | 9 |
mature T cell | 1.00e-08 | 9 |
immature alpha-beta T cell | 1.00e-08 | 9 |
T cell | 2.59e-07 | 11 |
pro-T cell | 2.59e-07 | 11 |
lymphoid lineage restricted progenitor cell | 8.83e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
urinary bladder | 5.15e-19 | 1 |
lower urinary tract | 5.15e-19 | 1 |
cloaca | 3.18e-07 | 3 |
anal region | 3.18e-07 | 3 |
embryonic cloaca | 3.18e-07 | 3 |
terminal part of digestive tract | 3.18e-07 | 3 |
hindgut | 3.18e-07 | 3 |
primitive urogenital sinus | 3.18e-07 | 3 |
proctodeum | 3.18e-07 | 3 |
epididymis | 4.17e-07 | 3 |
excretory tube | 4.17e-07 | 3 |
mesonephric epithelium | 4.17e-07 | 3 |
mesonephric tubule | 4.17e-07 | 3 |
nephric duct | 4.17e-07 | 3 |
kidney epithelium | 4.17e-07 | 3 |
renal duct | 4.17e-07 | 3 |
mesonephric duct | 4.17e-07 | 3 |
pronephric duct | 4.17e-07 | 3 |