FFCP PHASE1:Mm9::chr19:45438568..45438601,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:45438568..45438601,+ | |||
|description=CAGE_peak_at_chr19:45438568..45438601,+ | |description=CAGE_peak_at_chr19:45438568..45438601,+ | ||
|id=chr19:45438568..45438601,+ | |id=chr19:45438568..45438601,+ | ||
|ontology_enrichment_celltype=CL:0000540!9.64e-10!33;CL:0000047!9.64e-10!33;CL:0000031!9.64e-10!33;CL:0000404!9.64e-10!33;CL:0000221!5.06e-08!44;CL:0000133!5.06e-08!44;CL:0002319!1.54e-07!43;CL:0000393!1.84e-07!39;CL:0000211!1.84e-07!39;CL:0000107!6.00e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.05e-10,33;CL:0000047,1.05e-10,33;CL:0000031,1.05e-10,33;CL:0000404,1.05e-10,33;CL:0000221,1.21e-08,44;CL:0000133,1.21e-08,44;CL:0000393,4.30e-08,39;CL:0000211,4.30e-08,39;CL:0002319,4.38e-08,43;CL:0000107,4.87e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.61e-12!102;UBERON:0000924!2.61e-12!102;UBERON:0006601!2.61e-12!102;UBERON:0001017!6.59e-12!73;UBERON:0005743!6.59e-12!73;UBERON:0002346!9.15e-12!71;UBERON:0003075!9.15e-12!71;UBERON:0007284!9.15e-12!71;UBERON:0000073!2.70e-11!75;UBERON:0001016!2.70e-11!75;UBERON:0003056!6.63e-10!49;UBERON:0000033!3.16e-09!63;UBERON:0002410!6.00e-07!9;UBERON:0001049!7.77e-07!52;UBERON:0005068!7.77e-07!52;UBERON:0006241!7.77e-07!52;UBERON:0007135!7.77e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.55e-13,95;UBERON:0000924,1.55e-13,95;UBERON:0006601,1.55e-13,95;UBERON:0002346,1.04e-12,64;UBERON:0003075,1.04e-12,64;UBERON:0007284,1.04e-12,64;UBERON:0001017,1.24e-12,73;UBERON:0010314,1.32e-12,92;UBERON:0001016,9.30e-12,75;UBERON:0010371,6.70e-11,73;UBERON:0003056,4.63e-10,49;UBERON:0002410,4.87e-08,9;UBERON:0000073,7.92e-08,54;UBERON:0001049,3.72e-07,52;UBERON:0005068,3.72e-07,52;UBERON:0006241,3.72e-07,52;UBERON:0007135,3.72e-07,52 | |||
|phase1_expression=1.60148847104794,0,0,0.30246421130683,0,0.16787927191189,0,0.258246646883153,0.140788722151667,0,0.171217968225505,0.239316476986009,0.342401459862411,0.34968160967599,0,0.202475267389826,0,0.315462165358238,0,0.42438965179803,0.510259740906419,1.48936426801328,0.261199789138935,0,0.45881856213434,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.608261587317087,1.65192076945513,0,1.74420125104357,1.5378032791413,0.58328969722285,0.419959264876088,1.43752564364972,0.167782606057736,0,0,0,0,0.515672092277442,1.41621522601718,2.11596391708813,2.53532561402472,0.338844532069132,0,0,0,0,0.299600110518405,1.15265491596466,0.311068836925433,1.75507719831198,0.420649922702764,1.42825492201902,2.20868540951614,1.22490799214954,0.766763768145891,1.83843757322004,1.10115880999389,1.65993539510744,1.0752457327937,2.2420668914133,1.55528994124096,3.12548022334056,0.558365998002762,2.8138130501584,2.13917546887534,2.94628585473668,2.70506193518296,2.05039390407831,0.302904773332736,0.604572480854284,1.44932244350839,0,0,0,0,0,0.421333260395256,0.681721290312231,0.779358013808606,0.70667914902068,4.08445917352373,3.84979432242953,5.09610479413291,0,0,0.253359865475099,0,0.34255163915718,0.517875767294343,1.03909497345377,1.04091196059682,0.913396434936424,1.38369298353635,1.05505848386836,1.99900802130698,0.251333182659351,0,0.578397427679647,0.884610551949874,1.45590164952668,0,0.484875253135222,0,0,1.04723353406728,0,0.11981512450592,0.599902730993408,0.508280908292259,0.898743836428936,1.37250180845588,1.00523481690292,1.73824320192276,1.79000820131231,1.24672826735736,2.27137768294861,1.42575109390443,0.870848794270651,0.505445516867349,0.631325567659422,2.60240885925407,2.75882525320168,2.16074555766419,4.52114453507145,5.91917542616552,5.12454881139399,5.528401749024,4.39795730256327,1.94011193639558,2.26927296201383,1.75951124163949,1.09597866213787,3.89266148915837,1.74126083261083,1.02891068203972,2.58744546864041,0,0.51469581422943,0,2.69263504296152,3.75241695969754,2.88099298337624,1.89395788468168,2.16440654922144,2.46827380619805,2.09280550275367,0.804820204198858,0.817357396570186,1.31647879930784,1.47750717671186,0.891756905004413,0.584799949701329,0,0.402619256281115,1.05144974282064,1.64647379806855,0,0.264450566663544,2.13288250535234,0.928946687441754,0.902072229254653,0.80673409849337,1.11189021922435,0.570676878337677,0.474529061544512,0.823494773620054,0.754005626400808,0.198956472041151,1.36474860983384,0,0.216138049874694,0,1.32767530667157,3.65595240351132,1.1270773567308,3.25842124552503,1.55161989734101,1.68325967736765,2.33975187359752,0.590440591918409,1.255989822731,0.246794327843601,0,0.500535317148282,0.589676985339609,0.674586337154561,0.811440485554012,0.964708639009667,0,1.43848068725405,0.648540907100142,0.549122826376163,1.43768206527355,0.744281895337007,0.312037673114561,0,0.179397413521912,0.482443521363367,0.184753190166605,2.08440552947533,1.79261474086228,1.52770577197669,1.17345124144251,1.34005005953453,0.714130922658041,1.56106918286239,1.41871629695572,2.87904096543407,1.59454768657487,0.983179888294428,0.690739927463582,0.578596234326046,0,0.54390568381871,0,1.10374698521893,0.160550589987792,2.22702204525186,1.3114795630134,0.504941854408746,3.47059041357882,4.68526493155966,4.09304455692318,3.58453196928828,4.45597348164788,4.81230102341015,4.45291771842384,2.63030272120181,4.34816555741176,0.963963949265421,0.99358059645788,0.890328018336276,1.62886959353576,0.659880491890142,1.32745138339963,2.18502572539483,0.604647113929502,0.754420319023592,1.18120757152309,0,1.29214146584111,2.18120237686503,0.356497378384721,0,0,0,1.70219802876894,3.96134406868882,2.97524972700335,4.28674070063185,5.67488747655275,2.31879462882692,1.31639216481697,3.04464949114599,0,1.27099242518292,0,0.16488625294148,0.645857706783622,0.482503399425247,0.238744688006273,0,0.582961673259701,0.927126510052548,0,1.23832120777933,0.740778109478847,0.753473828018764,0.136694227721025,0.457556346413045,0.509935289981566,0.839708713941948,0.414599921413271,0,1.10717597753397,1.21991680276109,1.18805874903981,1.67270636811575,0.87345025498471,0.674321731924103,0.991841468704031,0.523511883968059,0.388844919875379,1.86401793926078,0.56369293868419,3.13984746692355,2.48187735685646,2.52786544847262,1.6790777052105,1.85851738039856,1.29092962510329,1.95306577265925,0.524296722128554,1.20792060413003,1.44015003128933,0,0.405450430580328,0.821687657318618,0.51968329191118,0,0.596044064343795,0.120195449519969,0.295379054349154,0.201932899896295,0.228620419965,0.403304740547362,0.487289403698762,0,0.467507608726276,0,0.221985953374065,0.986852422704233,0.335769232728157,0.386379188064381,0.187682475451182,0,0.428736758158132,0,1.12950368523413,1.38097570952153,1.14579102687879,1.3748254587495,2.74033007908257,1.5107877947794,2.02506750069542,0.900642406448441,0,1.03552062350364,1.55681021376265,2.79317411380722,2.390270480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|phase1_expression=1.60148847104794,0,0,0.30246421130683,0,0.16787927191189,0,0.258246646883153,0.140788722151667,0,0.171217968225505,0.239316476986009,0.342401459862411,0.34968160967599,0,0.202475267389826,0,0.315462165358238,0,0.42438965179803,0.510259740906419,1.48936426801328,0.261199789138935,0,0.45881856213434,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.608261587317087,1.65192076945513,0,1.74420125104357,1.5378032791413,0.58328969722285,0.419959264876088,1.43752564364972,0.167782606057736,0,0,0,0,0.515672092277442,1.41621522601718,2.11596391708813,2.53532561402472,0.338844532069132,0,0,0,0,0.299600110518405,1.15265491596466,0.311068836925433,1.75507719831198,0.420649922702764,1.42825492201902,2.20868540951614,1.22490799214954,0.766763768145891,1.83843757322004,1.10115880999389,1.65993539510744,1.0752457327937,2.2420668914133,1.55528994124096,3.12548022334056,0.558365998002762,2.8138130501584,2.13917546887534,2.94628585473668,2.70506193518296,2.05039390407831,0.302904773332736,0.604572480854284,1.44932244350839,0,0,0,0,0,0.421333260395256,0.681721290312231,0.779358013808606,0.70667914902068,4.08445917352373,3.84979432242953,5.09610479413291,0,0,0.253359865475099,0,0.34255163915718,0.517875767294343,1.03909497345377,1.04091196059682,0.913396434936424,1.38369298353635,1.05505848386836,1.99900802130698,0.251333182659351,0,0.578397427679647,0.884610551949874,1.45590164952668,0,0.484875253135222,0,0,1.04723353406728,0,0.11981512450592,0.599902730993408,0.508280908292259,0.898743836428936,1.37250180845588,1.00523481690292,1.73824320192276,1.79000820131231,1.24672826735736,2.27137768294861,1.42575109390443,0.870848794270651,0.505445516867349,0.631325567659422,2.60240885925407,2.75882525320168,2.16074555766419,4.52114453507145,5.91917542616552,5.12454881139399,5.528401749024,4.39795730256327,1.94011193639558,2.26927296201383,1.75951124163949,1.09597866213787,3.89266148915837,1.74126083261083,1.02891068203972,2.58744546864041,0,0.51469581422943,0,2.69263504296152,3.75241695969754,2.88099298337624,1.89395788468168,2.16440654922144,2.46827380619805,2.09280550275367,0.804820204198858,0.817357396570186,1.31647879930784,1.47750717671186,0.891756905004413,0.584799949701329,0,0.402619256281115,1.05144974282064,1.64647379806855,0,0.264450566663544,2.13288250535234,0.928946687441754,0.902072229254653,0.80673409849337,1.11189021922435,0.570676878337677,0.474529061544512,0.823494773620054,0.754005626400808,0.198956472041151,1.36474860983384,0,0.216138049874694,0,1.32767530667157,3.65595240351132,1.1270773567308,3.25842124552503,1.55161989734101,1.68325967736765,2.33975187359752,0.590440591918409,1.255989822731,0.246794327843601,0,0.500535317148282,0.589676985339609,0.674586337154561,0.811440485554012,0.964708639009667,0,1.43848068725405,0.648540907100142,0.549122826376163,1.43768206527355,0.744281895337007,0.312037673114561,0,0.179397413521912,0.482443521363367,0.184753190166605,2.08440552947533,1.79261474086228,1.52770577197669,1.17345124144251,1.34005005953453,0.714130922658041,1.56106918286239,1.41871629695572,2.87904096543407,1.59454768657487,0.983179888294428,0.690739927463582,0.578596234326046,0,0.54390568381871,0,1.10374698521893,0.160550589987792,2.22702204525186,1.3114795630134,0.504941854408746,3.47059041357882,4.68526493155966,4.09304455692318,3.58453196928828,4.45597348164788,4.81230102341015,4.45291771842384,2.63030272120181,4.34816555741176,0.963963949265421,0.99358059645788,0.890328018336276,1.62886959353576,0.659880491890142,1.32745138339963,2.18502572539483,0.604647113929502,0.754420319023592,1.18120757152309,0,1.29214146584111,2.18120237686503,0.356497378384721,0,0,0,1.70219802876894,3.96134406868882,2.97524972700335,4.28674070063185,5.67488747655275,2.31879462882692,1.31639216481697,3.04464949114599,0,1.27099242518292,0,0.16488625294148,0.645857706783622,0.482503399425247,0.238744688006273,0,0.582961673259701,0.927126510052548,0,1.23832120777933,0.740778109478847,0.753473828018764,0.136694227721025,0.457556346413045,0.509935289981566,0.839708713941948,0.414599921413271,0,1.10717597753397,1.21991680276109,1.18805874903981,1.67270636811575,0.87345025498471,0.674321731924103,0.991841468704031,0.523511883968059,0.388844919875379,1.86401793926078,0.56369293868419,3.13984746692355,2.48187735685646,2.52786544847262,1.6790777052105,1.85851738039856,1.29092962510329,1.95306577265925,0.524296722128554,1.20792060413003,1.44015003128933,0,0.405450430580328,0.821687657318618,0.51968329191118,0,0.596044064343795,0.120195449519969,0.295379054349154,0.201932899896295,0.228620419965,0.403304740547362,0.487289403698762,0,0.467507608726276,0,0.221985953374065,0.986852422704233,0.335769232728157,0.386379188064381,0.187682475451182,0,0.428736758158132,0,1.12950368523413,1.38097570952153,1.14579102687879,1.3748254587495,2.74033007908257,1.5107877947794,2.02506750069542,0.900642406448441,0,1.03552062350364,1.55681021376265,2.79317411380722,2.390270480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| ||
|short_description=p@chr19:45438568..45438601,+ | |short_description=p@chr19:45438568..45438601,+ | ||
}} | }} |
Latest revision as of 04:54, 4 August 2015
Short description: | p@chr19:45438568..45438601, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:45438568..45438601, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.05e-10 | 33 |
neuronal stem cell | 1.05e-10 | 33 |
neuroblast | 1.05e-10 | 33 |
electrically signaling cell | 1.05e-10 | 33 |
ectodermal cell | 1.21e-08 | 44 |
neurectodermal cell | 1.21e-08 | 44 |
electrically responsive cell | 4.30e-08 | 39 |
electrically active cell | 4.30e-08 | 39 |
neural cell | 4.38e-08 | 43 |
autonomic neuron | 4.87e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.55e-13 | 95 |
ectoderm | 1.55e-13 | 95 |
presumptive ectoderm | 1.55e-13 | 95 |
neurectoderm | 1.04e-12 | 64 |
neural plate | 1.04e-12 | 64 |
presumptive neural plate | 1.04e-12 | 64 |
central nervous system | 1.24e-12 | 73 |
structure with developmental contribution from neural crest | 1.32e-12 | 92 |
nervous system | 9.30e-12 | 75 |
ecto-epithelium | 6.70e-11 | 73 |
pre-chordal neural plate | 4.63e-10 | 49 |
autonomic nervous system | 4.87e-08 | 9 |
regional part of nervous system | 7.92e-08 | 54 |
neural tube | 3.72e-07 | 52 |
neural rod | 3.72e-07 | 52 |
future spinal cord | 3.72e-07 | 52 |
neural keel | 3.72e-07 | 52 |