FFCP PHASE1:Mm9::chr14:51677314..51677342,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=497106|HGNC=|MCL_coexpression_id=9|UniProt=Q5GAM8|association_with_transcript=-397bp_to_ENSMUST00000089798_5end|description=CAGE_peak_2_at_Rnase12_5end|id=chr14:51677314..51677342,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000014!9.99e-08!5;UBERON:0001003!9.99e-08!5;UBERON:0002097!9.99e-08!5;UBERON:0002199!9.99e-08!5;UBERON:0007029!9.99e-08!5;UBERON:0007376!9.99e-08!5;UBERON:0002416!9.99e-08!5;UBERON:0007383!9.99e-08!5|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.99e-14,3;UBERON:0006555,1.99e-14,3;UBERON:0005103,1.99e-14,3;UBERON:0000083,1.99e-14,3;UBERON:0009201,1.99e-14,3;UBERON:0004819,1.99e-14,3;UBERON:0006553,1.99e-14,3;UBERON:0003074,1.99e-14,3;UBERON:0003060,1.99e-14,3;UBERON:0002113,1.20e-11,14;UBERON:0003918,1.20e-11,14;UBERON:0011143,1.20e-11,14;UBERON:0005095,1.20e-11,14;UBERON:0007687,1.20e-11,14;UBERON:0000080,4.60e-11,4;UBERON:0005904,4.60e-11,4;UBERON:0006947,4.60e-11,4;UBERON:0002120,4.60e-11,4;UBERON:0004054,4.60e-11,4;UBERON:0004875,4.60e-11,4;UBERON:0004876,4.60e-11,4;UBERON:0005721,4.60e-11,4;UBERON:0005754,4.60e-11,4;UBERON:0007297,4.60e-11,4;UBERON:0006554,3.87e-09,18;UBERON:0001008,1.13e-08,19;UBERON:0000014,1.56e-08,5;UBERON:0001003,1.56e-08,5;UBERON:0002097,1.56e-08,5;UBERON:0002199,1.56e-08,5;UBERON:0007029,1.56e-08,5;UBERON:0007376,1.56e-08,5;UBERON:0002416,1.56e-08,5;UBERON:0007383,1.56e-08,5;UBERON:0000489,7.05e-08,21|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0.473193248037357,0.411343300817216,0.42438965179803,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1554064790051,0.166234645358492,0,0,0.7813353445238,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0.346970653532272,0,0,0,0.117588707135705,0,0,0,0,0.323533699894818,0.220841518460394,0,0,0,0,0,0.11981512450592,0.599902730993408,0.381210681219194,0,0,0,0,0.255715457330331,0,0,0,16.4217201205323,113.725241295154,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0.398068533636986,0,0.51469581422943,0.568326998791185,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.432276099749388,0.199141273254367,0.379335801906163,1.25673363870702,1.1270773567308,0,0.387904974335251,0.420814919341911,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0.65954501176592,0.161464426695906,0.301564624640779,1.07435109602823,1.14898629821543,0,0,0,0,0.185194527369712,0.565105371014073,0,0.228778173206523,0.169978429993855,0,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45636007509439,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661774257358546,0|short_description=p2@Rnase12}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:497106 | |||
|HGNC= | |||
|MCL_coexpression_id=9 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5GAM8 | |||
|association_with_transcript=-397bp_to_ENSMUST00000089798_5end | |||
|cluster_id=chr14:51677314..51677342,- | |||
|description=CAGE_peak_2_at_Rnase12_5end | |||
|id=chr14:51677314..51677342,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!9.99e-08!5;UBERON:0001003!9.99e-08!5;UBERON:0002097!9.99e-08!5;UBERON:0002199!9.99e-08!5;UBERON:0007029!9.99e-08!5;UBERON:0007376!9.99e-08!5;UBERON:0002416!9.99e-08!5;UBERON:0007383!9.99e-08!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.99e-14,3;UBERON:0006555,1.99e-14,3;UBERON:0005103,1.99e-14,3;UBERON:0000083,1.99e-14,3;UBERON:0009201,1.99e-14,3;UBERON:0004819,1.99e-14,3;UBERON:0006553,1.99e-14,3;UBERON:0003074,1.99e-14,3;UBERON:0003060,1.99e-14,3;UBERON:0002113,1.20e-11,14;UBERON:0003918,1.20e-11,14;UBERON:0011143,1.20e-11,14;UBERON:0005095,1.20e-11,14;UBERON:0007687,1.20e-11,14;UBERON:0000080,4.60e-11,4;UBERON:0005904,4.60e-11,4;UBERON:0006947,4.60e-11,4;UBERON:0002120,4.60e-11,4;UBERON:0004054,4.60e-11,4;UBERON:0004875,4.60e-11,4;UBERON:0004876,4.60e-11,4;UBERON:0005721,4.60e-11,4;UBERON:0005754,4.60e-11,4;UBERON:0007297,4.60e-11,4;UBERON:0006554,3.87e-09,18;UBERON:0001008,1.13e-08,19;UBERON:0000014,1.56e-08,5;UBERON:0001003,1.56e-08,5;UBERON:0002097,1.56e-08,5;UBERON:0002199,1.56e-08,5;UBERON:0007029,1.56e-08,5;UBERON:0007376,1.56e-08,5;UBERON:0002416,1.56e-08,5;UBERON:0007383,1.56e-08,5;UBERON:0000489,7.05e-08,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0.473193248037357,0.411343300817216,0.42438965179803,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1554064790051,0.166234645358492,0,0,0.7813353445238,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0.346970653532272,0,0,0,0.117588707135705,0,0,0,0,0.323533699894818,0.220841518460394,0,0,0,0,0,0.11981512450592,0.599902730993408,0.381210681219194,0,0,0,0,0.255715457330331,0,0,0,16.4217201205323,113.725241295154,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0.398068533636986,0,0.51469581422943,0.568326998791185,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.432276099749388,0.199141273254367,0.379335801906163,1.25673363870702,1.1270773567308,0,0.387904974335251,0.420814919341911,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0.65954501176592,0.161464426695906,0.301564624640779,1.07435109602823,1.14898629821543,0,0,0,0,0.185194527369712,0.565105371014073,0,0.228778173206523,0.169978429993855,0,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45636007509439,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661774257358546,0 | |||
|short_description=p2@Rnase12 | |||
}} |
Revision as of 09:20, 4 August 2015
Short description: | p2@Rnase12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rnase12_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | -397bp_to_ENSMUST00000089798_5end |
EntrezGene: | 497106 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 1.99e-14 | 3 |
excretory tube | 1.99e-14 | 3 |
mesonephric epithelium | 1.99e-14 | 3 |
mesonephric tubule | 1.99e-14 | 3 |
nephric duct | 1.99e-14 | 3 |
kidney epithelium | 1.99e-14 | 3 |
renal duct | 1.99e-14 | 3 |
mesonephric duct | 1.99e-14 | 3 |
pronephric duct | 1.99e-14 | 3 |
kidney | 1.20e-11 | 14 |
kidney mesenchyme | 1.20e-11 | 14 |
upper urinary tract | 1.20e-11 | 14 |
kidney rudiment | 1.20e-11 | 14 |
kidney field | 1.20e-11 | 14 |
mesonephros | 4.60e-11 | 4 |
duct of male reproductive system | 4.60e-11 | 4 |
male genital duct | 4.60e-11 | 4 |
pronephros | 4.60e-11 | 4 |
internal male genitalia | 4.60e-11 | 4 |
nephrogenic cord | 4.60e-11 | 4 |
urogenital ridge | 4.60e-11 | 4 |
pronephric mesoderm | 4.60e-11 | 4 |
rostral part of nephrogenic cord | 4.60e-11 | 4 |
presumptive pronephric mesoderm | 4.60e-11 | 4 |
urinary system structure | 3.87e-09 | 18 |
renal system | 1.13e-08 | 19 |
zone of skin | 1.56e-08 | 5 |
skin epidermis | 1.56e-08 | 5 |
skin of body | 1.56e-08 | 5 |
integument | 1.56e-08 | 5 |
surface | 1.56e-08 | 5 |
outer epithelium | 1.56e-08 | 5 |
integumental system | 1.56e-08 | 5 |
enveloping layer of ectoderm | 1.56e-08 | 5 |
cavitated compound organ | 7.05e-08 | 21 |