FFCP PHASE1:Mm9::chr2:163471573..163471583,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:163471573..163471583,- to FFCP PHASE1:Mm9::chr2:163471573..163471583,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=404 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:163471573..163471583,- | |||
|description=CAGE_peak_at_chr2:163471573..163471583,- | |||
|id=chr2:163471573..163471583,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.41e-12,6;CL:0000556,3.41e-12,6;CL:0000049,3.78e-11,19;CL:0000763,7.90e-11,16;CL:0000839,1.39e-10,13;CL:0000050,5.12e-08,9;CL:0000988,1.77e-07,32;CL:0002032,1.77e-07,32;CL:0000037,1.77e-07,32;CL:0000837,1.77e-07,32;CL:0002476,1.81e-07,2;CL:0002320,7.52e-07,46;CL:0000134,7.52e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002323!5.67e-13!37;UBERON:0004458!5.67e-13!37;UBERON:0002553!7.75e-13!39;UBERON:0003886!2.65e-12!38;UBERON:0000464!3.76e-09!57;UBERON:0000991!5.03e-08!18;UBERON:0005564!5.03e-08!18;UBERON:0004176!6.38e-08!17;UBERON:0009196!6.38e-08!17;UBERON:0009117!6.38e-08!17;UBERON:0000466!1.16e-07!79;UBERON:0002193!1.82e-07!48;UBERON:0000926!1.92e-07!193;UBERON:0004120!1.92e-07!193;UBERON:0006603!1.92e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.50e-17,16;UBERON:0001474,3.41e-14,22;UBERON:0004765,3.41e-14,22;UBERON:0001434,3.41e-14,22;UBERON:0002193,3.28e-12,48;UBERON:0002405,3.28e-12,48;UBERON:0002106,1.58e-11,6;UBERON:0004457,1.58e-11,6;UBERON:0000042,1.58e-11,6;UBERON:0004854,1.58e-11,6;UBERON:0009034,1.58e-11,6;UBERON:0002095,1.58e-11,6;UBERON:0004782,1.58e-11,6;UBERON:0003281,1.58e-11,6;UBERON:0009664,1.58e-11,6;UBERON:0002296,1.58e-11,6;UBERON:0005602,1.58e-11,6;UBERON:0001179,1.58e-11,6;UBERON:0006293,1.58e-11,6;UBERON:0002390,2.23e-11,45;UBERON:0003061,2.23e-11,45;UBERON:0002323,2.52e-10,37;UBERON:0004458,2.52e-10,37;UBERON:0003886,5.54e-10,38;UBERON:0002553,1.17e-09,39;UBERON:0002204,4.55e-09,32;UBERON:0000926,7.56e-09,120;UBERON:0004120,7.56e-09,120;UBERON:0006603,7.56e-09,120;UBERON:0002384,7.52e-07,46;UBERON:0003887,8.47e-07,10 | |||
|phase1_expression=0,0.697950815278722,0.454999239389536,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,1.01237633694913,2.09868563438444,3.62781490161973,3.56497527374921,2.54633791078818,0,0,0,0.319984845586813,0.45881856213434,0.57423196411502,0.86152399231815,0.430942465371778,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,2.85230430298152,0,0.336093799142464,0,0,0,0,0,0,0,0,1.3498495759221,1.97773272513395,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.02765491747154,4.66088190564909,1.03909497345377,0,0,0,0.301445281105245,1.17588707135705,0.376999773989026,0,0.144599356919912,1.76922110389975,0.161766849947409,0.220841518460394,0,0,0,0,0.255457055208591,1.31796636956512,0.599902730993408,0.508280908292259,0,0,0,0,0.255715457330331,0,0.162241263067758,0.203678727700633,0.622034853050465,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,1.42081749697796,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.243206428637567,0.292399974850665,0.219550115291051,0.402619256281115,0,0,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0,0,0,0,0.398282546508734,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.31399745568275,0,0,0,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.486405680325106,0.274561413188081,1.43768206527355,1.11642284300551,0.624075346229121,0,0.179397413521912,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0.172684981865896,0,7.53956419696361,4.35124547054968,0.983528546038072,0.551873492609465,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,2.41298144854057,0.534196811001766,0.488660878060728,0.329940245945071,2.65490276679926,0,0.302323556964751,0.188605079755898,0,0,0.516856586336442,0.363533729477506,0.712994756769443,0.632073515871632,1.05418608574999,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0.8244312647074,0.322928853391811,0.0603129249281559,0.119372344003136,0,0.582961673259701,0.18542530201051,2.39219233116994,0.206386867963223,1.29636169158798,1.13021074202815,2.1871076435364,1.37266903923914,0.169978429993855,0.139951452323658,0.276399947608848,0,0,0,0,0.209088296014469,0,0.269728692769641,0.495920734352016,0.523511883968059,0.129614973291793,0.621339313086926,0,1.34564891439581,0.992750942742586,0.583353565032143,1.93739735216597,1.68956125490778,4.69428954583016,1.17183946359555,0.419437377702843,0.724752362478018,0.288030006257865,0.948033361884535,0,0,0.129920822977795,0.179026695667481,0.596044064343795,0.360586348559907,0.147689527174577,0.201932899896295,0,0.504130925684203,0.682205165178267,0.384847366561318,0.935015217452552,0,0,0,0,0.579568782096571,0.563047426353546,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.64183841918363,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0.526139422875686,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,0.697950815278722,0.454999239389536,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,1.01237633694913,2.09868563438444,3.62781490161973,3.56497527374921,2.54633791078818,0,0,0,0.319984845586813,0.45881856213434,0.57423196411502,0.86152399231815,0.430942465371778,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,2.85230430298152,0,0.336093799142464,0,0,0,0,0,0,0,0,1.3498495759221,1.97773272513395,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.02765491747154,4.66088190564909,1.03909497345377,0,0,0,0.301445281105245,1.17588707135705,0.376999773989026,0,0.144599356919912,1.76922110389975,0.161766849947409,0.220841518460394,0,0,0,0,0.255457055208591,1.31796636956512,0.599902730993408,0.508280908292259,0,0,0,0,0.255715457330331,0,0.162241263067758,0.203678727700633,0.622034853050465,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,1.42081749697796,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.243206428637567,0.292399974850665,0.219550115291051,0.402619256281115,0,0,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0,0,0,0,0.398282546508734,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.31399745568275,0,0,0,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.486405680325106,0.274561413188081,1.43768206527355,1.11642284300551,0.624075346229121,0,0.179397413521912,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0.172684981865896,0,7.53956419696361,4.35124547054968,0.983528546038072,0.551873492609465,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,2.41298144854057,0.534196811001766,0.488660878060728,0.329940245945071,2.65490276679926,0,0.302323556964751,0.188605079755898,0,0,0.516856586336442,0.363533729477506,0.712994756769443,0.632073515871632,1.05418608574999,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0.8244312647074,0.322928853391811,0.0603129249281559,0.119372344003136,0,0.582961673259701,0.18542530201051,2.39219233116994,0.206386867963223,1.29636169158798,1.13021074202815,2.1871076435364,1.37266903923914,0.169978429993855,0.139951452323658,0.276399947608848,0,0,0,0,0.209088296014469,0,0.269728692769641,0.495920734352016,0.523511883968059,0.129614973291793,0.621339313086926,0,1.34564891439581,0.992750942742586,0.583353565032143,1.93739735216597,1.68956125490778,4.69428954583016,1.17183946359555,0.419437377702843,0.724752362478018,0.288030006257865,0.948033361884535,0,0,0.129920822977795,0.179026695667481,0.596044064343795,0.360586348559907,0.147689527174577,0.201932899896295,0,0.504130925684203,0.682205165178267,0.384847366561318,0.935015217452552,0,0,0,0,0.579568782096571,0.563047426353546,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.64183841918363,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0.526139422875686,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr2:163471573..163471583,- | |||
}} | }} |
Latest revision as of 11:28, 4 August 2015
Short description: | p@chr2:163471573..163471583, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:163471573..163471583, - |
Coexpression cluster: | MCL_coexpression_mm9:404 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.41e-12 | 6 |
megakaryocyte | 3.41e-12 | 6 |
common myeloid progenitor | 3.78e-11 | 19 |
myeloid cell | 7.90e-11 | 16 |
myeloid lineage restricted progenitor cell | 1.39e-10 | 13 |
megakaryocyte-erythroid progenitor cell | 5.12e-08 | 9 |
hematopoietic cell | 1.77e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.77e-07 | 32 |
hematopoietic stem cell | 1.77e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.77e-07 | 32 |
bone marrow macrophage | 1.81e-07 | 2 |
connective tissue cell | 7.52e-07 | 46 |
mesenchymal cell | 7.52e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.50e-17 | 16 |
bone element | 3.41e-14 | 22 |
skeletal element | 3.41e-14 | 22 |
skeletal system | 3.41e-14 | 22 |
hemolymphoid system | 3.28e-12 | 48 |
immune system | 3.28e-12 | 48 |
spleen | 1.58e-11 | 6 |
cavity lining | 1.58e-11 | 6 |
serous membrane | 1.58e-11 | 6 |
gastrointestinal system mesentery | 1.58e-11 | 6 |
stomach region | 1.58e-11 | 6 |
mesentery | 1.58e-11 | 6 |
gastrointestinal system serosa | 1.58e-11 | 6 |
mesentery of stomach | 1.58e-11 | 6 |
gut mesentery | 1.58e-11 | 6 |
dorsal mesentery | 1.58e-11 | 6 |
dorsal mesogastrium | 1.58e-11 | 6 |
peritoneal cavity | 1.58e-11 | 6 |
spleen primordium | 1.58e-11 | 6 |
hematopoietic system | 2.23e-11 | 45 |
blood island | 2.23e-11 | 45 |
body cavity | 2.52e-10 | 37 |
body cavity or lining | 2.52e-10 | 37 |
body cavity precursor | 5.54e-10 | 38 |
anatomical cavity | 1.17e-09 | 39 |
musculoskeletal system | 4.55e-09 | 32 |
mesoderm | 7.56e-09 | 120 |
mesoderm-derived structure | 7.56e-09 | 120 |
presumptive mesoderm | 7.56e-09 | 120 |
connective tissue | 7.52e-07 | 46 |
intraembryonic coelom | 8.47e-07 | 10 |