FFCP PHASE1:Mm9::chr10:56109271..56109285,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1892|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:56109271..56109285,+|id=chr10:56109271..56109285,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.04e-10!102;UBERON:0000924!1.04e-10!102;UBERON:0006601!1.04e-10!102;UBERON:0002346!3.81e-09!71;UBERON:0003075!3.81e-09!71;UBERON:0007284!3.81e-09!71;UBERON:0004535!4.91e-08!23;UBERON:0001009!4.91e-08!23;UBERON:0007100!5.84e-08!18;UBERON:0000948!5.84e-08!18;UBERON:0005498!5.84e-08!18;UBERON:0004140!5.84e-08!18;UBERON:0009881!5.84e-08!18;UBERON:0004141!5.84e-08!18;UBERON:0003084!5.84e-08!18;UBERON:0007005!5.84e-08!18;UBERON:0004139!5.84e-08!18;UBERON:0004291!5.84e-08!18;UBERON:0001017!1.16e-07!73;UBERON:0005743!1.16e-07!73;UBERON:0000073!2.54e-07!75;UBERON:0001016!2.54e-07!75;UBERON:0003103!7.88e-07!43;UBERON:0004872!9.23e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.82e-15,92;UBERON:0004121,3.79e-09,95;UBERON:0000924,3.79e-09,95;UBERON:0006601,3.79e-09,95;UBERON:0004535,3.70e-08,23;UBERON:0001009,3.70e-08,23;UBERON:0010371,4.33e-08,73;UBERON:0007100,4.42e-08,18;UBERON:0000948,4.42e-08,18;UBERON:0005498,4.42e-08,18;UBERON:0004140,4.42e-08,18;UBERON:0009881,4.42e-08,18;UBERON:0004141,4.42e-08,18;UBERON:0003084,4.42e-08,18;UBERON:0007005,4.42e-08,18;UBERON:0004139,4.42e-08,18;UBERON:0004291,4.42e-08,18;UBERON:0002346,1.10e-07,64;UBERON:0003075,1.10e-07,64;UBERON:0007284,1.10e-07,64;UBERON:0001017,1.14e-07,73;UBERON:0001016,2.53e-07,75;UBERON:0000073,3.81e-07,54|phase1_expression=2.5623815536767,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,1.33243904726265,0.404950534779652,2.79824751251259,0,0.274228867211478,0,5.69790044012167,0.397163804803541,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,13.7227531593379,12.3679856087808,15.9685674380663,7.04152209913235,10.6832326626419,3.51497892375155,11.2769341463084,49.9751525202544,4.31257693094915,0,0,0,4.3734104126111,1.43266719969378,6.18806510732931,0.202316460859598,1.05798195854407,3.1691570175309,7.79342423759004,36.4610866405567,0.899899717281399,3.9554654502679,5.6838409195688,14.6804054154018,16.5213871288268,2.69592992002042,2.70011876663381,2.52389953621658,15.4251531578054,15.0190607847097,1.46988959057945,0.575072826109418,1.83843757322004,8.8092704799511,16.98241596533,17.664751324468,1.05509030184155,1.73826522844578,4.68822033501084,22.6138229191119,44.4582461925027,28.2676758387099,22.6864010814724,21.0710087582672,4.47358669980721,2.19605960666234,3.17400552448499,3.76823835312181,0,0,0,0.649776417447669,0,4.49422144421606,24.2011058060842,64.1671431369086,41.3407302177098,0.14084341977668,6.41632387071589,5.09610479413291,7.11066703153331,13.4224445426953,12.6679932737549,15.6712577954583,2.2836775943812,0,1.33597925158342,9.36820764537134,26.4884966131563,20.9860102503013,19.8953885529462,11.5236932992991,7.79132866243988,4.94389935468748,2.4581890676385,0.884610551949874,6.14714029800155,8.83366073841574,15.5160081003271,0,7.90508151931177,13.6140359428746,1.02182822083437,0.359445373517761,0.599902730993408,0.254140454146129,9.58660092190865,8.23501085073528,1.50785222535437,6.08385120672968,9.46147192122223,9.97382613885888,10.8701646255398,6.31404055871961,22.5176616804268,23.2504937758981,1.89397670297827,15.7445735984871,8.27647575960503,5.04173963454978,13.5634336052144,6.12328492361951,10.1209839025031,7.30873451565885,6.98499100995342,10.1316956678436,3.9712276835242,3.51902248327898,10.9597866213787,23.6340161841758,15.6713474934975,37.8639130990616,11.1459189418356,0.702213187313235,0.51469581422943,0,8.07790512888457,19.2311369184499,23.5881300513929,13.0209604571866,25.9728785906573,35.6357030769844,43.0187797788255,47.216118646333,30.4757543578312,27.1523752357243,47.7727320470167,28.1308769124119,45.321996101853,39.079920521807,31.6727148274477,5.88811855979556,3.08713837137853,0,0.793351699990633,4.90562976231038,4.64473343720877,0.77320476793256,0.605050573870028,0.889512175379481,1.33157938278791,5.69434873853414,2.30578536613615,7.28872105520782,4.77495532898762,4.09424582950152,0.898819408654221,4.10662294761919,2.19055400579804,4.1726938209678,6.85491075658373,0,7.73875045812194,4.46090720485539,2.03393877681924,0.632365371242573,0.590440591918409,0.627994911365499,0.863780147452604,0,0.500535317148282,0.196558995113203,0,0.405720242777006,0,0.50925170356284,0.287696137450811,0,1.64736847912849,4.31304619582064,1.86070473834252,0.936113019343682,0.505157755894224,1.07638448113147,0,2.21703828199926,3.7898282354097,2.11854469374634,7.46878377410828,5.16318546234705,5.52770649557992,4.99891645860629,4.48807390072937,5.2019597555043,7.75126413770712,3.98636921643718,7.53771247692395,8.63424909329478,9.69148692496127,0,0,1.47529281905711,1.10374698521893,12.8440471990234,14.2998257642488,2.78689407140348,8.33154059774431,6.62567260774139,8.19921363022941,4.5238913523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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1892 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:56109271..56109285,+ | |||
|description=CAGE_peak_at_chr10:56109271..56109285,+ | |||
|id=chr10:56109271..56109285,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.04e-10!102;UBERON:0000924!1.04e-10!102;UBERON:0006601!1.04e-10!102;UBERON:0002346!3.81e-09!71;UBERON:0003075!3.81e-09!71;UBERON:0007284!3.81e-09!71;UBERON:0004535!4.91e-08!23;UBERON:0001009!4.91e-08!23;UBERON:0007100!5.84e-08!18;UBERON:0000948!5.84e-08!18;UBERON:0005498!5.84e-08!18;UBERON:0004140!5.84e-08!18;UBERON:0009881!5.84e-08!18;UBERON:0004141!5.84e-08!18;UBERON:0003084!5.84e-08!18;UBERON:0007005!5.84e-08!18;UBERON:0004139!5.84e-08!18;UBERON:0004291!5.84e-08!18;UBERON:0001017!1.16e-07!73;UBERON:0005743!1.16e-07!73;UBERON:0000073!2.54e-07!75;UBERON:0001016!2.54e-07!75;UBERON:0003103!7.88e-07!43;UBERON:0004872!9.23e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.82e-15,92;UBERON:0004121,3.79e-09,95;UBERON:0000924,3.79e-09,95;UBERON:0006601,3.79e-09,95;UBERON:0004535,3.70e-08,23;UBERON:0001009,3.70e-08,23;UBERON:0010371,4.33e-08,73;UBERON:0007100,4.42e-08,18;UBERON:0000948,4.42e-08,18;UBERON:0005498,4.42e-08,18;UBERON:0004140,4.42e-08,18;UBERON:0009881,4.42e-08,18;UBERON:0004141,4.42e-08,18;UBERON:0003084,4.42e-08,18;UBERON:0007005,4.42e-08,18;UBERON:0004139,4.42e-08,18;UBERON:0004291,4.42e-08,18;UBERON:0002346,1.10e-07,64;UBERON:0003075,1.10e-07,64;UBERON:0007284,1.10e-07,64;UBERON:0001017,1.14e-07,73;UBERON:0001016,2.53e-07,75;UBERON:0000073,3.81e-07,54 | |||
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| |||
|short_description=p@chr10:56109271..56109285,+ | |||
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Latest revision as of 11:34, 4 August 2015
Short description: | p@chr10:56109271..56109285, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:56109271..56109285, + |
Coexpression cluster: | MCL_coexpression_mm9:1892 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.82e-15 | 92 |
ectoderm-derived structure | 3.79e-09 | 95 |
ectoderm | 3.79e-09 | 95 |
presumptive ectoderm | 3.79e-09 | 95 |
cardiovascular system | 3.70e-08 | 23 |
circulatory system | 3.70e-08 | 23 |
ecto-epithelium | 4.33e-08 | 73 |
primary circulatory organ | 4.42e-08 | 18 |
heart | 4.42e-08 | 18 |
primitive heart tube | 4.42e-08 | 18 |
primary heart field | 4.42e-08 | 18 |
anterior lateral plate mesoderm | 4.42e-08 | 18 |
heart tube | 4.42e-08 | 18 |
heart primordium | 4.42e-08 | 18 |
cardiac mesoderm | 4.42e-08 | 18 |
cardiogenic plate | 4.42e-08 | 18 |
heart rudiment | 4.42e-08 | 18 |
neurectoderm | 1.10e-07 | 64 |
neural plate | 1.10e-07 | 64 |
presumptive neural plate | 1.10e-07 | 64 |
central nervous system | 1.14e-07 | 73 |
nervous system | 2.53e-07 | 75 |
regional part of nervous system | 3.81e-07 | 54 |