FFCP PHASE1:Mm9::chr7:148317240..148317277,+: Difference between revisions
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{{FFCP|EntrezGene=27388|HGNC=|MCL_coexpression_id=0|UniProt=G3UYQ3|association_with_transcript=0bp_to_ENSMUST00000173721,ENSMUST00000174058_5end|description=CAGE_peak_2_at_Ptdss2_5end|id=chr7:148317240..148317277,+|ontology_enrichment_celltype=CL:0000221!1.75e-10!44;CL:0000133!1.75e-10!44;CL:0002319!2.08e-10!43;CL:0000540!6.75e-08!33;CL:0000047!6.75e-08!33;CL:0000031!6.75e-08!33;CL:0000404!6.75e-08!33;CL:0000055!7.55e-08!50|ontology_enrichment_celltype_v019_2=CL:0000221,1.73e-10,44;CL:0000133,1.73e-10,44;CL:0002319,2.06e-10,43;CL:0000540,6.71e-08,33;CL:0000047,6.71e-08,33;CL:0000031,6.71e-08,33;CL:0000404,6.71e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.63e-11!73;UBERON:0005743!1.63e-11!73;UBERON:0000073!1.38e-10!75;UBERON:0001016!1.38e-10!75;UBERON:0004121!6.74e-08!102;UBERON:0000924!6.74e-08!102;UBERON:0006601!6.74e-08!102;UBERON:0002346!2.21e-07!71;UBERON:0003075!2.21e-07!71;UBERON:0007284!2.21e-07!71;UBERON:0001049!8.53e-07!52;UBERON:0005068!8.53e-07!52;UBERON:0006241!8.53e-07!52;UBERON:0007135!8.53e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.61e-11,73;UBERON:0001016,1.37e-10,75;UBERON:0004121,1.09e-08,95;UBERON:0000924,1.09e-08,95;UBERON:0006601,1.09e-08,95;UBERON:0002346,1.82e-08,64;UBERON:0003075,1.82e-08,64;UBERON:0007284,1.82e-08,64;UBERON:0000073,7.54e-07,54;UBERON:0001049,8.48e-07,52;UBERON:0005068,8.48e-07,52;UBERON:0006241,8.48e-07,52;UBERON:0007135,8.48e-07,52|phase1_expression=10.890121603126,8.72438519098403,8.18998630901165,11.7961042409664,11.520601788766,2.18243053485457,3.03696432774183,0.129123323441576,1.83025338797167,1.40438715793196,0.68487187290202,0.717949430958028,0,0.437102012094987,11.6588416635482,14.5782192520675,19.5877325875881,0.315462165358238,0.822686601634433,1.69755860719212,25.0877705945656,1.48936426801328,2.87319768052829,5.91971964335605,5.73523202667925,5.7423196411502,9.04600191934057,4.52489588640367,5.32065574477847,4.78857246543868,4.8780712344167,32.3865643464412,28.2929802288902,15.8481681015439,0.866554859253824,1.16364251750945,3.47087905646027,0,0,0.523523743973798,0,0,0,4.78407908307194,3.24406179902447,4.22157529971868,20.342174953049,12.4274339136855,13.4008571468028,18.2764105129826,10.9189408867783,15.8127820801469,0.671130424230945,0.725362142011344,0,2.82985379639542,3.43840127926508,5.15672092277442,14.3644687210314,13.7537654610729,19.6487735086916,8.80995783379743,9.78224275722253,3.5995988691256,3.9554654502679,2.8419204597844,14.081205194365,21.5162250980071,6.73982480005105,9.85543349821342,6.94072372459561,18.5673139862472,18.7738259808871,7.4719387521122,6.13411014516713,5.51531271966013,7.70811166995721,7.53355294702608,5.06901559745603,18.2003077067668,12.4423195299277,14.5855743755893,8.65467296904281,3.93933827022176,6.1119299110724,20.3293723976831,14.3795397607094,15.6575534493252,1.4387976733305,3.17400552448499,2.89864488701678,1.72084775396277,1.3599426674155,1.61910957491345,2.59910566979068,6.72040330646003,6.88177658645584,3.06774580640504,1.81850203222008,3.88673531961374,7.32385782838739,0,2.54805239706646,0,2.59789249213457,1.77351905832569,2.52762222507392,6.39429726426736,0.517875767294343,2.07818994690755,8.15381035800839,6.69824052286711,4.84292544237723,3.01445281105245,4.35078216402108,3.26733137457156,7.16865406429684,5.63937491987655,6.19227386364912,3.72063754879041,4.19598885074748,5.33362778448744,5.59175283654366,6.73395833126558,5.86450779077674,4.34276993854605,1.1981512450592,1.79970819298022,0.889491589511453,5.09288173976397,4.57500602818627,5.90575454930463,4.17178368461463,3.06858548796397,3.94797284663164,8.27430441645564,7.84163101647435,3.6078021476927,4.54900965180614,2.31486041475121,17.4361393570023,19.7715809812787,13.6847218652065,12.0563854268572,9.32100038373192,7.43059577652129,4.96619140166563,3.62184719034622,13.7963515477019,14.7502742530899,12.3165786914764,10.0830036916684,9.45360647367033,3.48252166522167,2.88094990971121,15.723707078661,0.702213187313235,1.02939162845886,0.568326998791185,7.66365358381357,8.20841209933837,6.48223421259654,3.55117103377815,4.72234156193769,4.78228049950873,4.41814495025775,2.14618721119695,5.02090972178829,4.11399624783701,3.11918181750281,3.97237166774693,1.75439984910399,4.17145219052996,2.01309628140558,5.88811855979556,6.17427674275707,11.5646574044329,6.34681359992506,13.650448034255,10.4506502337197,5.7990357594942,4.84040459096022,4.22518283305254,4.37518940058886,3.79623249235609,5.76446341534038,3.01602250560323,2.38747766449381,2.72949721966768,6.29173586057955,2.37751854862164,2.78797782556114,14.035424670528,9.13988100877831,4.50830942692322,9.9789150644204,10.861339281387,9.18779240563173,10.9399209224965,10.1851002105925,11.1469096767376,15.7948369819905,2.96452627087149,14.181833985868,16.9040735797355,12.5922782935518,15.0116489827492,9.40590923034426,10.6942857748196,8.63088412352432,9.07957269940198,4.94210543738547,2.87536413054709,3.34926852901653,1.872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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:27388 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3UYQ3 | |||
|association_with_transcript=0bp_to_ENSMUST00000173721,ENSMUST00000174058_5end | |||
|cluster_id=chr7:148317240..148317277,+ | |||
|description=CAGE_peak_2_at_Ptdss2_5end | |||
|id=chr7:148317240..148317277,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.75e-10!44;CL:0000133!1.75e-10!44;CL:0002319!2.08e-10!43;CL:0000540!6.75e-08!33;CL:0000047!6.75e-08!33;CL:0000031!6.75e-08!33;CL:0000404!6.75e-08!33;CL:0000055!7.55e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.73e-10,44;CL:0000133,1.73e-10,44;CL:0002319,2.06e-10,43;CL:0000540,6.71e-08,33;CL:0000047,6.71e-08,33;CL:0000031,6.71e-08,33;CL:0000404,6.71e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.63e-11!73;UBERON:0005743!1.63e-11!73;UBERON:0000073!1.38e-10!75;UBERON:0001016!1.38e-10!75;UBERON:0004121!6.74e-08!102;UBERON:0000924!6.74e-08!102;UBERON:0006601!6.74e-08!102;UBERON:0002346!2.21e-07!71;UBERON:0003075!2.21e-07!71;UBERON:0007284!2.21e-07!71;UBERON:0001049!8.53e-07!52;UBERON:0005068!8.53e-07!52;UBERON:0006241!8.53e-07!52;UBERON:0007135!8.53e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.61e-11,73;UBERON:0001016,1.37e-10,75;UBERON:0004121,1.09e-08,95;UBERON:0000924,1.09e-08,95;UBERON:0006601,1.09e-08,95;UBERON:0002346,1.82e-08,64;UBERON:0003075,1.82e-08,64;UBERON:0007284,1.82e-08,64;UBERON:0000073,7.54e-07,54;UBERON:0001049,8.48e-07,52;UBERON:0005068,8.48e-07,52;UBERON:0006241,8.48e-07,52;UBERON:0007135,8.48e-07,52 | |||
|phase1_expression=10.890121603126,8.72438519098403,8.18998630901165,11.7961042409664,11.520601788766,2.18243053485457,3.03696432774183,0.129123323441576,1.83025338797167,1.40438715793196,0.68487187290202,0.717949430958028,0,0.437102012094987,11.6588416635482,14.5782192520675,19.5877325875881,0.315462165358238,0.822686601634433,1.69755860719212,25.0877705945656,1.48936426801328,2.87319768052829,5.91971964335605,5.73523202667925,5.7423196411502,9.04600191934057,4.52489588640367,5.32065574477847,4.78857246543868,4.8780712344167,32.3865643464412,28.2929802288902,15.8481681015439,0.866554859253824,1.16364251750945,3.47087905646027,0,0,0.523523743973798,0,0,0,4.78407908307194,3.24406179902447,4.22157529971868,20.342174953049,12.4274339136855,13.4008571468028,18.2764105129826,10.9189408867783,15.8127820801469,0.671130424230945,0.725362142011344,0,2.82985379639542,3.43840127926508,5.15672092277442,14.3644687210314,13.7537654610729,19.6487735086916,8.80995783379743,9.78224275722253,3.5995988691256,3.9554654502679,2.8419204597844,14.081205194365,21.5162250980071,6.73982480005105,9.85543349821342,6.94072372459561,18.5673139862472,18.7738259808871,7.4719387521122,6.13411014516713,5.51531271966013,7.70811166995721,7.53355294702608,5.06901559745603,18.2003077067668,12.4423195299277,14.5855743755893,8.65467296904281,3.93933827022176,6.1119299110724,20.3293723976831,14.3795397607094,15.6575534493252,1.4387976733305,3.17400552448499,2.89864488701678,1.72084775396277,1.3599426674155,1.61910957491345,2.59910566979068,6.72040330646003,6.88177658645584,3.06774580640504,1.81850203222008,3.88673531961374,7.32385782838739,0,2.54805239706646,0,2.59789249213457,1.77351905832569,2.52762222507392,6.39429726426736,0.517875767294343,2.07818994690755,8.15381035800839,6.69824052286711,4.84292544237723,3.01445281105245,4.35078216402108,3.26733137457156,7.16865406429684,5.63937491987655,6.19227386364912,3.72063754879041,4.19598885074748,5.33362778448744,5.59175283654366,6.73395833126558,5.86450779077674,4.34276993854605,1.1981512450592,1.79970819298022,0.889491589511453,5.09288173976397,4.57500602818627,5.90575454930463,4.17178368461463,3.06858548796397,3.94797284663164,8.27430441645564,7.84163101647435,3.6078021476927,4.54900965180614,2.31486041475121,17.4361393570023,19.7715809812787,13.6847218652065,12.0563854268572,9.32100038373192,7.43059577652129,4.96619140166563,3.62184719034622,13.7963515477019,14.7502742530899,12.3165786914764,10.0830036916684,9.45360647367033,3.48252166522167,2.88094990971121,15.723707078661,0.702213187313235,1.02939162845886,0.568326998791185,7.66365358381357,8.20841209933837,6.48223421259654,3.55117103377815,4.72234156193769,4.78228049950873,4.41814495025775,2.14618721119695,5.02090972178829,4.11399624783701,3.11918181750281,3.97237166774693,1.75439984910399,4.17145219052996,2.01309628140558,5.88811855979556,6.17427674275707,11.5646574044329,6.34681359992506,13.650448034255,10.4506502337197,5.7990357594942,4.84040459096022,4.22518283305254,4.37518940058886,3.79623249235609,5.76446341534038,3.01602250560323,2.38747766449381,2.72949721966768,6.29173586057955,2.37751854862164,2.78797782556114,14.035424670528,9.13988100877831,4.50830942692322,9.9789150644204,10.861339281387,9.18779240563173,10.9399209224965,10.1851002105925,11.1469096767376,15.7948369819905,2.96452627087149,14.181833985868,16.9040735797355,12.5922782935518,15.0116489827492,9.40590923034426,10.6942857748196,8.63088412352432,9.07957269940198,4.94210543738547,2.87536413054709,3.34926852901653,1.87222603868736,1.26289438973556,1.4351793081753,4.82443521363367,2.03228509183265,12.127450353311,4.88894929326078,5.7713329163564,6.10194645550105,4.02015017860358,4.52282917683426,3.70753930929818,2.04925687338048,1.55025282754142,1.2756381492599,1.80249646187312,1.38147985492716,2.4590339958857,7.53956419696361,6.52686820582452,2.95058563811422,3.58717770196152,5.29816946959713,5.97779601620236,1.14754461763673,3.28212205365685,7.88770548540642,9.37052986311932,7.75524231838076,5.9742199488138,5.79276552614225,7.64306633129848,10.5250782435473,10.8134667427185,10.2774822266096,4.81981974632711,4.11626247103979,11.5742642383716,9.12166972380026,4.28922319728592,0,8.49732226542435,6.34879469625977,2.26326095707078,5.31543407185391,3.99665692327106,2.32585463851399,2.54473610634254,1.42598951353889,0.316036757935816,1.05418608574999,1.03135543248187,1.70219802876894,14.4048875225048,14.3588138998857,12.0028739617692,9.75371285032505,9.27517851530767,8.72109809191241,6.69822888052118,9.1521966144847,12.0744280392378,1.98475558249466,1.81374878235628,3.87514624070173,2.17126529741361,2.50681922406587,2.79039529566604,2.62332752966866,7.23158677840988,10.7648654902647,8.46186158649212,5.74103034846106,16.1996873024034,12.7125631780553,13.7266903923914,1.18984900995699,1.11961161858926,0.967399816630967,0.954670618015114,15.1841276918945,5.69294507955176,4.96824567780286,5.01811910434725,3.27543845619266,2.56242258131159,2.56225712748541,1.30877970992015,5.44382887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| |||
|short_description=p2@Ptdss2 | |||
}} |
Revision as of 12:17, 4 August 2015
Short description: | p2@Ptdss2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ptdss2_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000173721, ENSMUST00000174058_5end |
EntrezGene: | 27388 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.73e-10 | 44 |
neurectodermal cell | 1.73e-10 | 44 |
neural cell | 2.06e-10 | 43 |
neuron | 6.71e-08 | 33 |
neuronal stem cell | 6.71e-08 | 33 |
neuroblast | 6.71e-08 | 33 |
electrically signaling cell | 6.71e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.61e-11 | 73 |
nervous system | 1.37e-10 | 75 |
ectoderm-derived structure | 1.09e-08 | 95 |
ectoderm | 1.09e-08 | 95 |
presumptive ectoderm | 1.09e-08 | 95 |
neurectoderm | 1.82e-08 | 64 |
neural plate | 1.82e-08 | 64 |
presumptive neural plate | 1.82e-08 | 64 |
regional part of nervous system | 7.54e-07 | 54 |
neural tube | 8.48e-07 | 52 |
neural rod | 8.48e-07 | 52 |
future spinal cord | 8.48e-07 | 52 |
neural keel | 8.48e-07 | 52 |