FFCP PHASE1:Mm9::chr17:27963869..27963903,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=26 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:27963869..27963903,- | |||
|description=CAGE_peak_at_chr17:27963869..27963903,- | |description=CAGE_peak_at_chr17:27963869..27963903,- | ||
|id=chr17:27963869..27963903,- | |id=chr17:27963869..27963903,- | ||
|ontology_enrichment_celltype=CL:0000988!1.35e-09!32;CL:0002032!1.35e-09!32;CL:0000037!1.35e-09!32;CL:0000566!1.35e-09!32;CL:0000837!1.35e-09!32;CL:0000838!6.44e-08!12;CL:0002320!7.13e-08!46;CL:0000134!7.13e-08!46;CL:0002031!1.34e-07!25;CL:0000542!3.92e-07!13;CL:0000051!3.92e-07!13;CL:0000084!9.27e-07!11;CL:0000827!9.27e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.63e-10,1;CL:0002078,1.63e-10,1;CL:0000115,1.63e-10,1;CL:0002262,1.63e-10,1;CL:1000398,1.63e-10,1;CL:0000945,3.04e-10,1;CL:0000236,3.04e-10,1;CL:0000826,3.04e-10,1;CL:0000625,4.59e-10,1;CL:0000355,1.28e-09,9;CL:0002031,9.32e-09,25;CL:0000723,2.31e-07,91;CL:0000048,2.31e-07,91;CL:0000838,3.68e-07,12;CL:0000034,7.22e-07,97;CL:0000988,7.54e-07,32;CL:0002032,7.54e-07,32;CL:0000037,7.54e-07,32;CL:0000837,7.54e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.68e-27,3;DOID:4045,1.68e-27,3;DOID:0050686,4.07e-14,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!7.13e-08!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.63e-10,1;UBERON:0001281,1.63e-10,1;UBERON:0000353,1.63e-10,1;UBERON:0003497,1.63e-10,1;UBERON:0003909,1.63e-10,1;UBERON:0003928,1.63e-10,1;UBERON:0003835,1.63e-10,1;UBERON:0003513,1.63e-10,1;UBERON:0001280,1.63e-10,1;UBERON:0004647,1.63e-10,1;UBERON:0002294,1.63e-10,1;UBERON:0001173,1.63e-10,1;UBERON:0004912,1.63e-10,1;UBERON:0005171,1.63e-10,1;UBERON:0001134,1.28e-09,9;UBERON:0002036,1.28e-09,9;UBERON:0002385,1.28e-09,9;UBERON:0000486,1.28e-09,9;UBERON:0007503,1.28e-09,9;UBERON:0001015,1.28e-09,9;UBERON:0002329,1.28e-09,9;UBERON:0003082,1.28e-09,9;UBERON:0003059,1.28e-09,9;UBERON:0007282,1.28e-09,9;UBERON:0004290,1.28e-09,9;UBERON:0009618,1.28e-09,9;UBERON:0000383,1.03e-08,10;UBERON:0007524,5.67e-08,11;UBERON:0003077,5.67e-08,11;UBERON:0007285,5.67e-08,11;UBERON:0002204,5.75e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,1.12630977721333,0.468129052643987,0,0.0797721589953364,0.342401459862411,0.524522414513984,0,0.202475267389826,0,1.10411757875383,1.23402990245165,0.84877930359606,0,0,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92972141515835,2.3440060335714,2.61761871986899,1.17646297606203,0.683045484958446,0.485510353031154,0,0.101376931219515,0,0,0,0,0,0,0,2.51673909086605,0,2.01656279485478,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.0755715601067855,20.8702431865208,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0.255457055208591,0.479260498023681,0,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.379335801906163,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0.430846795465598,0,0.222798674082394,0,0,0.876767573733936,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.16488625294148,0,0,0,0,0.291480836629851,0,0.170870880797853,0,0.185194527369712,0,0,0,0.339956859987711,0.419854356970974,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0.337912250981556,0.234714477291508,0.13020438484395,0,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0.194915761479505,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.516493293766305,1.12630977721333,0.468129052643987,0,0.0797721589953364,0.342401459862411,0.524522414513984,0,0.202475267389826,0,1.10411757875383,1.23402990245165,0.84877930359606,0,0,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92972141515835,2.3440060335714,2.61761871986899,1.17646297606203,0.683045484958446,0.485510353031154,0,0.101376931219515,0,0,0,0,0,0,0,2.51673909086605,0,2.01656279485478,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.0755715601067855,20.8702431865208,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0.255457055208591,0.479260498023681,0,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.379335801906163,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0.430846795465598,0,0.222798674082394,0,0,0.876767573733936,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.16488625294148,0,0,0,0,0.291480836629851,0,0.170870880797853,0,0.185194527369712,0,0,0,0.339956859987711,0.419854356970974,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0.337912250981556,0.234714477291508,0.13020438484395,0,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0.194915761479505,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr17:27963869..27963903,- | |short_description=p@chr17:27963869..27963903,- | ||
}} | }} |
Latest revision as of 12:38, 4 August 2015
Short description: | p@chr17:27963869..27963903, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:27963869..27963903, - |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.63e-10 | 1 |
meso-epithelial cell | 1.63e-10 | 1 |
endothelial cell | 1.63e-10 | 1 |
endothelial cell of sinusoid | 1.63e-10 | 1 |
endothelial cell of hepatic sinusoid | 1.63e-10 | 1 |
lymphocyte of B lineage | 3.04e-10 | 1 |
B cell | 3.04e-10 | 1 |
pro-B cell | 3.04e-10 | 1 |
CD8-positive, alpha-beta T cell | 4.59e-10 | 1 |
multi-potent skeletal muscle stem cell | 1.28e-09 | 9 |
hematopoietic lineage restricted progenitor cell | 9.32e-09 | 25 |
somatic stem cell | 2.31e-07 | 91 |
multi fate stem cell | 2.31e-07 | 91 |
lymphoid lineage restricted progenitor cell | 3.68e-07 | 12 |
stem cell | 7.22e-07 | 97 |
hematopoietic cell | 7.54e-07 | 32 |
hematopoietic oligopotent progenitor cell | 7.54e-07 | 32 |
hematopoietic stem cell | 7.54e-07 | 32 |
hematopoietic multipotent progenitor cell | 7.54e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.63e-10 | 1 |
hepatic sinusoid | 1.63e-10 | 1 |
parenchyma | 1.63e-10 | 1 |
abdomen blood vessel | 1.63e-10 | 1 |
sinusoid | 1.63e-10 | 1 |
digestive system duct | 1.63e-10 | 1 |
abdominal segment blood vessel | 1.63e-10 | 1 |
trunk blood vessel | 1.63e-10 | 1 |
liver parenchyma | 1.63e-10 | 1 |
liver lobule | 1.63e-10 | 1 |
biliary system | 1.63e-10 | 1 |
biliary tree | 1.63e-10 | 1 |
biliary bud | 1.63e-10 | 1 |
hepatic duct | 1.63e-10 | 1 |
skeletal muscle tissue | 1.28e-09 | 9 |
striated muscle tissue | 1.28e-09 | 9 |
muscle tissue | 1.28e-09 | 9 |
multilaminar epithelium | 1.28e-09 | 9 |
epithelial vesicle | 1.28e-09 | 9 |
musculature | 1.28e-09 | 9 |
somite | 1.28e-09 | 9 |
myotome | 1.28e-09 | 9 |
presomitic mesoderm | 1.28e-09 | 9 |
presumptive segmental plate | 1.28e-09 | 9 |
dermomyotome | 1.28e-09 | 9 |
trunk paraxial mesoderm | 1.28e-09 | 9 |
musculature of body | 1.03e-08 | 10 |
dense mesenchyme tissue | 5.67e-08 | 11 |
paraxial mesoderm | 5.67e-08 | 11 |
presumptive paraxial mesoderm | 5.67e-08 | 11 |
musculoskeletal system | 5.75e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.68e-27 | 3 |
muscle cancer | 1.68e-27 | 3 |
organ system cancer | 4.07e-14 | 6 |