FFCP PHASE1:Mm9::chr1:130090307..130090310,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=857 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:130090307..130090310,+ | |||
|description=CAGE_peak_at_chr1:130090307..130090310,+ | |description=CAGE_peak_at_chr1:130090307..130090310,+ | ||
|id=chr1:130090307..130090310,+ | |id=chr1:130090307..130090310,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!7.80e-09!10;UBERON:0000411!7.80e-09!10;UBERON:0001950!7.80e-09!10;UBERON:0000956!2.74e-08!21;UBERON:0001869!2.74e-08!21;UBERON:0000203!2.74e-08!21;UBERON:0000955!7.59e-08!50;UBERON:0006238!7.59e-08!50;UBERON:0002791!1.49e-07!29;UBERON:0003528!1.49e-07!29;UBERON:0001893!1.49e-07!29;UBERON:0007811!2.29e-07!86;UBERON:0000153!2.66e-07!94;UBERON:0002616!2.96e-07!49;UBERON:0002020!3.19e-07!34;UBERON:0001049!5.01e-07!52;UBERON:0005068!5.01e-07!52;UBERON:0006241!5.01e-07!52;UBERON:0007135!5.01e-07!52;UBERON:0001017!7.00e-07!73;UBERON:0005743!7.00e-07!73;UBERON:0000073!8.26e-07!75;UBERON:0001016!8.26e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.71e-39,10;UBERON:0000411,3.71e-39,10;UBERON:0001950,3.71e-39,10;UBERON:0002619,5.75e-23,17;UBERON:0000956,1.51e-18,21;UBERON:0001869,1.51e-18,21;UBERON:0000203,1.51e-18,21;UBERON:0003528,2.40e-13,29;UBERON:0002791,2.40e-13,29;UBERON:0001893,2.40e-13,29;UBERON:0002020,2.48e-11,34;UBERON:0002780,7.88e-10,39;UBERON:0001890,7.88e-10,39;UBERON:0006240,7.88e-10,39;UBERON:0003080,1.42e-09,40;UBERON:0001851,5.27e-09,1;UBERON:0005889,5.27e-09,1;UBERON:0002616,2.86e-08,46;UBERON:0000955,4.38e-08,47;UBERON:0006238,4.38e-08,47;UBERON:0003056,9.77e-08,49;UBERON:0001049,2.90e-07,52;UBERON:0005068,2.90e-07,52;UBERON:0006241,2.90e-07,52;UBERON:0007135,2.90e-07,52;UBERON:0000073,5.61e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.34243593645101,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0,0,0,0.127687338085188,0.768032666281217,0.131886287730194,0,0,0,0,0.15279824777681,0,0.284743361598206,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,0,1.28326477414318,0,0,0,0.253359865475099,0,0,0.517875767294343,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0.457500602818626,0.125654352112864,0.347648640384553,1.27857728665165,0,0,0.101839363850316,0.124406970610093,0,0,0.260240885925407,0,0,0.150704817835715,0.204109497453984,0,0,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0,0,0,0,0.146199987425332,0,0,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0,0.147610147979602,0,0.123397163921801,0.296452627087149,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,2.87536413054709,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0,0,0.327726629431476,0,0,0,0,0,0.275936746304732,0,0.234423373184406,0,0,0,0.390438744296638,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0.963963949265421,0.425820255624806,0.35613120733451,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0,0,0,0.23467170806371,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0.18542530201051,0,0,0.370389054739423,0,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.269728692769641,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0.576060012515731,0.316011120628178,0,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0.100826185136841,0,0.0962118416403295,0.233753804363138,0,0,0.0897138566094757,0.335769232728157,0,0.187682475451182,0,0,0,1.6942555278512,0.920650473014354,2.86447756719698,2.92150409984269,0,2.2661816921691,1.35004500046361,1.35096360967266,0.906284817968409,1.55328093525546,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.17230640686684,0,0,0,0,0,0.342869252385415,0,0,0,0,0.169229215783353,0.182927972872773,0,0.135804113845862,1.12228454331548,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.34243593645101,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0,0,0,0.127687338085188,0.768032666281217,0.131886287730194,0,0,0,0,0.15279824777681,0,0.284743361598206,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,0,1.28326477414318,0,0,0,0.253359865475099,0,0,0.517875767294343,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0.457500602818626,0.125654352112864,0.347648640384553,1.27857728665165,0,0,0.101839363850316,0.124406970610093,0,0,0.260240885925407,0,0,0.150704817835715,0.204109497453984,0,0,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0,0,0,0,0.146199987425332,0,0,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0,0.147610147979602,0,0.123397163921801,0.296452627087149,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,2.87536413054709,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0,0,0.327726629431476,0,0,0,0,0,0.275936746304732,0,0.234423373184406,0,0,0,0.390438744296638,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0.963963949265421,0.425820255624806,0.35613120733451,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0,0,0,0.23467170806371,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0.18542530201051,0,0,0.370389054739423,0,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.269728692769641,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0.576060012515731,0.316011120628178,0,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0.100826185136841,0,0.0962118416403295,0.233753804363138,0,0,0.0897138566094757,0.335769232728157,0,0.187682475451182,0,0,0,1.6942555278512,0.920650473014354,2.86447756719698,2.92150409984269,0,2.2661816921691,1.35004500046361,1.35096360967266,0.906284817968409,1.55328093525546,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.17230640686684,0,0,0,0,0,0.342869252385415,0,0,0,0,0.169229215783353,0.182927972872773,0,0.135804113845862,1.12228454331548,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr1:130090307..130090310,+ | |short_description=p@chr1:130090307..130090310,+ | ||
}} | }} |
Latest revision as of 17:16, 4 August 2015
Short description: | p@chr1:130090307..130090310, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:130090307..130090310, + |
Coexpression cluster: | MCL_coexpression_mm9:857 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.71e-39 | 10 |
visual cortex | 3.71e-39 | 10 |
neocortex | 3.71e-39 | 10 |
regional part of cerebral cortex | 5.75e-23 | 17 |
cerebral cortex | 1.51e-18 | 21 |
cerebral hemisphere | 1.51e-18 | 21 |
pallium | 1.51e-18 | 21 |
brain grey matter | 2.40e-13 | 29 |
regional part of telencephalon | 2.40e-13 | 29 |
telencephalon | 2.40e-13 | 29 |
gray matter | 2.48e-11 | 34 |
regional part of forebrain | 7.88e-10 | 39 |
forebrain | 7.88e-10 | 39 |
future forebrain | 7.88e-10 | 39 |
anterior neural tube | 1.42e-09 | 40 |
cortex | 5.27e-09 | 1 |
zygote cortex | 5.27e-09 | 1 |
regional part of brain | 2.86e-08 | 46 |
brain | 4.38e-08 | 47 |
future brain | 4.38e-08 | 47 |
pre-chordal neural plate | 9.77e-08 | 49 |
neural tube | 2.90e-07 | 52 |
neural rod | 2.90e-07 | 52 |
future spinal cord | 2.90e-07 | 52 |
neural keel | 2.90e-07 | 52 |
regional part of nervous system | 5.61e-07 | 54 |