FFCP PHASE1:Mm9::chr12:114382235..114382248,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:114382235..114382248,+ | |||
|description=CAGE_peak_at_chr12:114382235..114382248,+ | |description=CAGE_peak_at_chr12:114382235..114382248,+ | ||
|id=chr12:114382235..114382248,+ | |id=chr12:114382235..114382248,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.11e-15!50;CL:0000221!2.99e-13!44;CL:0000133!2.99e-13!44;CL:0002319!7.05e-13!43;CL:0000393!1.66e-10!39;CL:0000211!1.66e-10!39;CL:0002321!5.32e-10!70;CL:0000220!5.32e-10!70;CL:0000540!1.94e-08!33;CL:0000047!1.94e-08!33;CL:0000031!1.94e-08!33;CL:0000404!1.94e-08!33;CL:0000117!3.73e-07!23;CL:0000337!3.73e-07!23 | |ontology_enrichment_celltype=CL:0000055!2.11e-15!50;CL:0000221!2.99e-13!44;CL:0000133!2.99e-13!44;CL:0002319!7.05e-13!43;CL:0000393!1.66e-10!39;CL:0000211!1.66e-10!39;CL:0002321!5.32e-10!70;CL:0000220!5.32e-10!70;CL:0000540!1.94e-08!33;CL:0000047!1.94e-08!33;CL:0000031!1.94e-08!33;CL:0000404!1.94e-08!33;CL:0000117!3.73e-07!23;CL:0000337!3.73e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.04e-10,70;CL:0002453,1.58e-10,8;CL:0000221,7.06e-10,44;CL:0000133,7.06e-10,44;CL:0002319,2.48e-09,43;CL:0000333,5.02e-08,10;CL:0000095,5.02e-08,10;CL:0000243,5.02e-08,10;CL:0000123,5.02e-08,10;CL:0000125,5.02e-08,10;CL:0000030,5.02e-08,10;CL:0000339,5.02e-08,10;CL:0000128,5.50e-08,6;CL:0000126,5.50e-08,6;CL:0000127,5.50e-08,6;CL:0000034,2.71e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!2.74e-14!114;UBERON:0004111!4.63e-14!122;UBERON:0000073!3.12e-12!75;UBERON:0001016!3.12e-12!75;UBERON:0001017!4.83e-12!73;UBERON:0005743!4.83e-12!73;UBERON:0007100!1.44e-10!18;UBERON:0000948!1.44e-10!18;UBERON:0005498!1.44e-10!18;UBERON:0004140!1.44e-10!18;UBERON:0009881!1.44e-10!18;UBERON:0004141!1.44e-10!18;UBERON:0003084!1.44e-10!18;UBERON:0007005!1.44e-10!18;UBERON:0004139!1.44e-10!18;UBERON:0004291!1.44e-10!18;UBERON:0004535!2.09e-10!23;UBERON:0001009!2.09e-10!23;UBERON:0002020!4.10e-09!34;UBERON:0004872!1.06e-08!33;UBERON:0004121!1.89e-08!102;UBERON:0000924!1.89e-08!102;UBERON:0006601!1.89e-08!102;UBERON:0003103!6.71e-08!43;UBERON:0000477!7.22e-08!154;UBERON:0001049!1.79e-07!52;UBERON:0005068!1.79e-07!52;UBERON:0006241!1.79e-07!52;UBERON:0007135!1.79e-07!52;UBERON:0000956!1.83e-07!21;UBERON:0001869!1.83e-07!21;UBERON:0000203!1.83e-07!21;UBERON:0002791!2.15e-07!29;UBERON:0003528!2.15e-07!29;UBERON:0001893!2.15e-07!29;UBERON:0002619!3.99e-07!17 | |ontology_enrichment_uberon=UBERON:0000025!2.74e-14!114;UBERON:0004111!4.63e-14!122;UBERON:0000073!3.12e-12!75;UBERON:0001016!3.12e-12!75;UBERON:0001017!4.83e-12!73;UBERON:0005743!4.83e-12!73;UBERON:0007100!1.44e-10!18;UBERON:0000948!1.44e-10!18;UBERON:0005498!1.44e-10!18;UBERON:0004140!1.44e-10!18;UBERON:0009881!1.44e-10!18;UBERON:0004141!1.44e-10!18;UBERON:0003084!1.44e-10!18;UBERON:0007005!1.44e-10!18;UBERON:0004139!1.44e-10!18;UBERON:0004291!1.44e-10!18;UBERON:0004535!2.09e-10!23;UBERON:0001009!2.09e-10!23;UBERON:0002020!4.10e-09!34;UBERON:0004872!1.06e-08!33;UBERON:0004121!1.89e-08!102;UBERON:0000924!1.89e-08!102;UBERON:0006601!1.89e-08!102;UBERON:0003103!6.71e-08!43;UBERON:0000477!7.22e-08!154;UBERON:0001049!1.79e-07!52;UBERON:0005068!1.79e-07!52;UBERON:0006241!1.79e-07!52;UBERON:0007135!1.79e-07!52;UBERON:0000956!1.83e-07!21;UBERON:0001869!1.83e-07!21;UBERON:0000203!1.83e-07!21;UBERON:0002791!2.15e-07!29;UBERON:0003528!2.15e-07!29;UBERON:0001893!2.15e-07!29;UBERON:0002619!3.99e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.08e-16,18;UBERON:0000948,8.08e-16,18;UBERON:0005498,8.08e-16,18;UBERON:0004140,8.08e-16,18;UBERON:0009881,8.08e-16,18;UBERON:0004141,8.08e-16,18;UBERON:0003084,8.08e-16,18;UBERON:0007005,8.08e-16,18;UBERON:0004139,8.08e-16,18;UBERON:0004291,8.08e-16,18;UBERON:0004535,6.27e-13,23;UBERON:0001009,6.27e-13,23;UBERON:0010314,1.39e-12,92;UBERON:0000025,8.63e-12,114;UBERON:0004111,1.77e-11,122;UBERON:0003103,1.81e-10,43;UBERON:0002020,7.54e-10,34;UBERON:0000956,2.76e-09,21;UBERON:0001869,2.76e-09,21;UBERON:0000203,2.76e-09,21;UBERON:0002021,3.02e-09,10;UBERON:0000411,3.02e-09,10;UBERON:0001950,3.02e-09,10;UBERON:0001017,3.81e-09,73;UBERON:0002619,6.20e-09,17;UBERON:0001016,1.13e-08,75;UBERON:0004872,1.70e-08,33;UBERON:0003528,1.00e-07,29;UBERON:0002791,1.00e-07,29;UBERON:0001893,1.00e-07,29;UBERON:0003914,8.61e-07,47 | |||
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,1.01237633694913,2.09868563438444,0.157731082679119,0.137114433605739,0,1.19060606211498,0.0992909512008853,0,0,0,0,0,0,0,0,0,2.54012269383853,3.07532393792285,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.811015449756117,0.367093504323363,1.56478268869608,6.75877984779384,4.39372365468944,6.9994763666742,2.09979632438044,1.43752564364972,0,0,0,8.2323019531503,4.01146815914259,9.28209766099396,0.404632921719196,2.64495489636016,3.1691570175309,1.35537812827653,0.889294796111139,2.6996991518442,0.988866362566974,2.1314403448383,2.99600110518405,6.53171119046643,0.933206510776299,4.18518408828241,1.26194976810829,1.14260393761521,1.98781686856452,0.61245399607477,0.958454710182364,1.83843757322004,0,0.510749352340751,0.768032666281217,0.659431438650969,3.20206752608434,0.52091337055676,1.11673199600552,0.56276261003168,0.45839474333043,2.06240009831567,1.28134512719193,0.559198337475902,0.832988126665025,0.226714680320357,2.02905142091174,0.860423876981386,0,2.15881276655127,1.94932925234301,0,0.140444420131752,1.53387290320252,4.1565760736459,2.47337702157238,1.26759077799012,0,0,0,1.29894624606728,1.77351905832569,1.51657333504435,0.22836775943812,0,0.148442139064825,0,0.304465478312141,0,0,0,0.125666591329675,0.494389935468748,0.144599356919912,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0,0,0,0.255715457330331,0.41557608911912,0,0,0.248813941220186,0,0,0.130120442962704,0,0.540186389416048,0.452114453507145,0.204109497453984,0.12811372028485,0,0.517406741478031,0,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0,1.65700618028402,1.40715635988658,2.70093092191522,3.31442629819294,0.590292695242212,2.31400669331067,2.55787339225449,1.87791380979733,2.33530684734339,0.987359099480883,2.13417703302824,1.29710095273369,3.07019973593198,2.85415149878366,1.74468344388483,0,0.308713837137853,0,0,0,0,0.38660238396628,0.403367049246685,0,0.190225626112559,0,0,0,0,0,0,0.216138049874694,0,0.379335801906163,0.114248512609729,0,0.407302655690628,0,0.0701358198903186,0.126473074248515,0.147610147979602,0.31399745568275,0,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0.274561413188081,1.43768206527355,0,0,0.505157755894224,0,1.4473305640901,0.739012760666419,0.757965647081939,0.162964976442026,0.339490171550376,0.704070744865506,0.502518772325447,0.238043640886014,2.14647012643579,0,0.44292937929755,1.11618338060241,0.983179888294428,0.518054945597687,1.59113964439663,0,0,0,0.551873492609465,0.321101179975584,0.468846746368813,0,0.252470927204373,1.26203287766503,0.780877488593277,1.07711698866399,0,0.891194696329576,0.566153061577665,1.61924280669958,1.46127928955656,0.790575555893047,0.642642632843614,0.141940085208269,0.178065603667255,0.162886959353576,0.494910368917606,0,0,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0.258717367565509,0,0.177340233642274,0.178368817602071,0.658196082408484,0.304464949114599,1.40803024838226,0,0,0.8244312647074,0.484393280087717,0.120625849856312,0.119372344003136,0,0.291480836629851,0.370850604021019,0.341741761595705,0.206386867963223,0.370389054739423,0.376736914009382,0.410082683163076,0.686334519619568,0,0.139951452323658,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.41326727862668,0,0.388844919875379,0,1.12738587736838,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0.117357238645754,0,0,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0.240390899039938,0,0.302899349844443,0,0.403304740547362,0,0.288635524920988,0.116876902181569,0.906921534460845,1.55390167361845,2.6017018416748,2.18250001273302,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,1.00314420807073,2.82375921308533,1.84130094602871,4.58316410751517,1.03111909406213,1.37016503954128,2.2661816921691,4.05013500139084,2.2516060161211,2.71885445390523,0.51776031175182,0.207574695168353,0.399024873401031,0,0,0.419226325255965,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.640251524048693,0.17230640686684,0.952587382566147,0.115884325944855,0,0.412085900803307,0.294397840268795,0.685738504770831,0.532427418478012,0.238436189947321,0.581385666529314,0.658765662907314,0.25384382367503,0.365855945745545,0,0.814824683075171,0,0.355905054372522,0.394017929502254,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.765153328275374,0.220591419119515,0.231867835620421 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|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,1.01237633694913,2.09868563438444,0.157731082679119,0.137114433605739,0,1.19060606211498,0.0992909512008853,0,0,0,0,0,0,0,0,0,2.54012269383853,3.07532393792285,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.811015449756117,0.367093504323363,1.56478268869608,6.75877984779384,4.39372365468944,6.9994763666742,2.09979632438044,1.43752564364972,0,0,0,8.2323019531503,4.01146815914259,9.28209766099396,0.404632921719196,2.64495489636016,3.1691570175309,1.35537812827653,0.889294796111139,2.6996991518442,0.988866362566974,2.1314403448383,2.99600110518405,6.53171119046643,0.933206510776299,4.18518408828241,1.26194976810829,1.14260393761521,1.98781686856452,0.61245399607477,0.958454710182364,1.83843757322004,0,0.510749352340751,0.768032666281217,0.659431438650969,3.20206752608434,0.52091337055676,1.11673199600552,0.56276261003168,0.45839474333043,2.06240009831567,1.28134512719193,0.559198337475902,0.832988126665025,0.226714680320357,2.02905142091174,0.860423876981386,0,2.15881276655127,1.94932925234301,0,0.140444420131752,1.53387290320252,4.1565760736459,2.47337702157238,1.26759077799012,0,0,0,1.29894624606728,1.77351905832569,1.51657333504435,0.22836775943812,0,0.148442139064825,0,0.304465478312141,0,0,0,0.125666591329675,0.494389935468748,0.144599356919912,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0,0,0,0.255715457330331,0.41557608911912,0,0,0.248813941220186,0,0,0.130120442962704,0,0.540186389416048,0.452114453507145,0.204109497453984,0.12811372028485,0,0.517406741478031,0,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0,1.65700618028402,1.40715635988658,2.70093092191522,3.31442629819294,0.590292695242212,2.31400669331067,2.55787339225449,1.87791380979733,2.33530684734339,0.987359099480883,2.13417703302824,1.29710095273369,3.07019973593198,2.85415149878366,1.74468344388483,0,0.308713837137853,0,0,0,0,0.38660238396628,0.403367049246685,0,0.190225626112559,0,0,0,0,0,0,0.216138049874694,0,0.379335801906163,0.114248512609729,0,0.407302655690628,0,0.0701358198903186,0.126473074248515,0.147610147979602,0.31399745568275,0,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0.274561413188081,1.43768206527355,0,0,0.505157755894224,0,1.4473305640901,0.739012760666419,0.757965647081939,0.162964976442026,0.339490171550376,0.704070744865506,0.502518772325447,0.238043640886014,2.14647012643579,0,0.44292937929755,1.11618338060241,0.983179888294428,0.518054945597687,1.59113964439663,0,0,0,0.551873492609465,0.321101179975584,0.468846746368813,0,0.252470927204373,1.26203287766503,0.780877488593277,1.07711698866399,0,0.891194696329576,0.566153061577665,1.61924280669958,1.46127928955656,0.790575555893047,0.642642632843614,0.141940085208269,0.178065603667255,0.162886959353576,0.494910368917606,0,0,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0.258717367565509,0,0.177340233642274,0.178368817602071,0.658196082408484,0.304464949114599,1.40803024838226,0,0,0.8244312647074,0.484393280087717,0.120625849856312,0.119372344003136,0,0.291480836629851,0.370850604021019,0.341741761595705,0.206386867963223,0.370389054739423,0.376736914009382,0.410082683163076,0.686334519619568,0,0.139951452323658,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.41326727862668,0,0.388844919875379,0,1.12738587736838,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0.117357238645754,0,0,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0.240390899039938,0,0.302899349844443,0,0.403304740547362,0,0.288635524920988,0.116876902181569,0.906921534460845,1.55390167361845,2.6017018416748,2.18250001273302,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,1.00314420807073,2.82375921308533,1.84130094602871,4.58316410751517,1.03111909406213,1.37016503954128,2.2661816921691,4.05013500139084,2.2516060161211,2.71885445390523,0.51776031175182,0.207574695168353,0.399024873401031,0,0,0.419226325255965,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.640251524048693,0.17230640686684,0.952587382566147,0.115884325944855,0,0.412085900803307,0.294397840268795,0.685738504770831,0.532427418478012,0.238436189947321,0.581385666529314,0.658765662907314,0.25384382367503,0.365855945745545,0,0.814824683075171,0,0.355905054372522,0.394017929502254,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.765153328275374,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr12:114382235..114382248,+ | |short_description=p@chr12:114382235..114382248,+ | ||
}} | }} |
Latest revision as of 19:34, 4 August 2015
Short description: | p@chr12:114382235..114382248, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114382235..114382248, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.04e-10 | 70 |
oligodendrocyte precursor cell | 1.58e-10 | 8 |
ectodermal cell | 7.06e-10 | 44 |
neurectodermal cell | 7.06e-10 | 44 |
neural cell | 2.48e-09 | 43 |
migratory neural crest cell | 5.02e-08 | 10 |
neuron associated cell | 5.02e-08 | 10 |
glial cell (sensu Vertebrata) | 5.02e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 5.02e-08 | 10 |
glial cell | 5.02e-08 | 10 |
glioblast | 5.02e-08 | 10 |
glioblast (sensu Vertebrata) | 5.02e-08 | 10 |
oligodendrocyte | 5.50e-08 | 6 |
macroglial cell | 5.50e-08 | 6 |
astrocyte | 5.50e-08 | 6 |
stem cell | 2.71e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 8.08e-16 | 18 |
heart | 8.08e-16 | 18 |
primitive heart tube | 8.08e-16 | 18 |
primary heart field | 8.08e-16 | 18 |
anterior lateral plate mesoderm | 8.08e-16 | 18 |
heart tube | 8.08e-16 | 18 |
heart primordium | 8.08e-16 | 18 |
cardiac mesoderm | 8.08e-16 | 18 |
cardiogenic plate | 8.08e-16 | 18 |
heart rudiment | 8.08e-16 | 18 |
cardiovascular system | 6.27e-13 | 23 |
circulatory system | 6.27e-13 | 23 |
structure with developmental contribution from neural crest | 1.39e-12 | 92 |
tube | 8.63e-12 | 114 |
anatomical conduit | 1.77e-11 | 122 |
compound organ | 1.81e-10 | 43 |
gray matter | 7.54e-10 | 34 |
cerebral cortex | 2.76e-09 | 21 |
cerebral hemisphere | 2.76e-09 | 21 |
pallium | 2.76e-09 | 21 |
occipital lobe | 3.02e-09 | 10 |
visual cortex | 3.02e-09 | 10 |
neocortex | 3.02e-09 | 10 |
central nervous system | 3.81e-09 | 73 |
regional part of cerebral cortex | 6.20e-09 | 17 |
nervous system | 1.13e-08 | 75 |
splanchnic layer of lateral plate mesoderm | 1.70e-08 | 33 |
brain grey matter | 1.00e-07 | 29 |
regional part of telencephalon | 1.00e-07 | 29 |
telencephalon | 1.00e-07 | 29 |
epithelial tube | 8.61e-07 | 47 |