FFCP PHASE1:Mm9::chr7:25683387..25683390,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:25683387..25683390,+ | |||
|description=CAGE_peak_at_chr7:25683387..25683390,+ | |description=CAGE_peak_at_chr7:25683387..25683390,+ | ||
|id=chr7:25683387..25683390,+ | |id=chr7:25683387..25683390,+ | ||
|ontology_enrichment_celltype=CL:0000553!1.20e-16!6;CL:0000556!1.20e-16!6;CL:0000050!5.15e-11!9;CL:0000414!5.83e-09!11;CL:0000839!1.55e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,9.63e-23,6;CL:0000556,9.63e-23,6;CL:0000945,6.79e-16,1;CL:0000236,6.79e-16,1;CL:0000826,6.79e-16,1;CL:0000050,1.89e-15,9;CL:0000839,6.16e-11,13;CL:0002031,5.78e-10,25;CL:0000763,5.07e-09,16;CL:0000988,6.80e-08,32;CL:0002032,6.80e-08,32;CL:0000037,6.80e-08,32;CL:0000837,6.80e-08,32;CL:0000049,1.05e-07,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!6.49e-10!6;UBERON:0004457!6.49e-10!6;UBERON:0000042!6.49e-10!6;UBERON:0004854!6.49e-10!6;UBERON:0009034!6.49e-10!6;UBERON:0002095!6.49e-10!6;UBERON:0004782!6.49e-10!6;UBERON:0003281!6.49e-10!6;UBERON:0009664!6.49e-10!6;UBERON:0002296!6.49e-10!6;UBERON:0005602!6.49e-10!6;UBERON:0001179!6.49e-10!6;UBERON:0006293!6.49e-10!6;UBERON:0002193!2.40e-09!48;UBERON:0001962!5.24e-09!2;UBERON:0001961!5.24e-09!2;UBERON:0001744!5.24e-09!2;UBERON:0003887!5.26e-09!10;UBERON:0001474!5.60e-08!22;UBERON:0004765!5.60e-08!22;UBERON:0001434!5.60e-08!22;UBERON:0002390!8.82e-07!45;UBERON:0003061!8.82e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,2.55e-29,2;UBERON:0001961,2.55e-29,2;UBERON:0001744,2.55e-29,2;UBERON:0002465,6.06e-20,3;UBERON:0003199,1.33e-15,1;UBERON:0002371,5.07e-09,16;UBERON:0002193,5.33e-08,48;UBERON:0002405,5.33e-08,48;UBERON:0001474,9.67e-07,22;UBERON:0004765,9.67e-07,22;UBERON:0001434,9.67e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,2.05050407482854,2.4680598049033,2.97072756258621,0,0,0,1.11994695955385,1.60586496747019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18117387875057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0.915112692826091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,2.05050407482854,2.4680598049033,2.97072756258621,0,0,0,1.11994695955385,1.60586496747019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18117387875057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0.915112692826091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr7:25683387..25683390,+ | |short_description=p@chr7:25683387..25683390,+ | ||
}} | }} |
Latest revision as of 19:38, 4 August 2015
Short description: | p@chr7:25683387..25683390, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:25683387..25683390, + |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 9.63e-23 | 6 |
megakaryocyte | 9.63e-23 | 6 |
lymphocyte of B lineage | 6.79e-16 | 1 |
B cell | 6.79e-16 | 1 |
pro-B cell | 6.79e-16 | 1 |
megakaryocyte-erythroid progenitor cell | 1.89e-15 | 9 |
myeloid lineage restricted progenitor cell | 6.16e-11 | 13 |
hematopoietic lineage restricted progenitor cell | 5.78e-10 | 25 |
myeloid cell | 5.07e-09 | 16 |
hematopoietic cell | 6.80e-08 | 32 |
hematopoietic oligopotent progenitor cell | 6.80e-08 | 32 |
hematopoietic stem cell | 6.80e-08 | 32 |
hematopoietic multipotent progenitor cell | 6.80e-08 | 32 |
common myeloid progenitor | 1.05e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 2.55e-29 | 2 |
mucosa-associated lymphoid tissue | 2.55e-29 | 2 |
lymphoid tissue | 2.55e-29 | 2 |
lymphoid system | 6.06e-20 | 3 |
egg chamber | 1.33e-15 | 1 |
bone marrow | 5.07e-09 | 16 |
hemolymphoid system | 5.33e-08 | 48 |
immune system | 5.33e-08 | 48 |
bone element | 9.67e-07 | 22 |
skeletal element | 9.67e-07 | 22 |
skeletal system | 9.67e-07 | 22 |