FFCP PHASE1:Mm9::chr9:3018760..3018779,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr9:3018760..3018779,+ to FFCP PHASE1:Mm9::chr9:3018760..3018779,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=721 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:3018760..3018779,+ | |||
|description=CAGE_peak_at_chr9:3018760..3018779,+ | |||
|id=chr9:3018760..3018779,+ | |||
|ontology_enrichment_celltype=CL:0000553!4.44e-12!6;CL:0000556!4.44e-12!6;CL:0000414!6.16e-09!11;CL:0000215!2.00e-08!3;CL:0000050!6.77e-08!9;CL:0002031!2.44e-07!25;CL:0000219!7.51e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.50e-37,6;CL:0000556,3.50e-37,6;CL:0000050,6.88e-25,9;CL:0000839,2.68e-17,13;CL:0000763,4.38e-14,16;CL:0002027,3.66e-13,3;CL:0002006,3.66e-13,3;CL:0002024,3.66e-13,3;CL:0002320,6.80e-12,46;CL:0000134,6.80e-12,46;CL:0000049,7.02e-12,19;CL:0000219,4.53e-10,54;CL:0000213,6.88e-10,1;CL:0002078,6.88e-10,1;CL:0000115,6.88e-10,1;CL:0002262,6.88e-10,1;CL:1000398,6.88e-10,1;CL:0002031,4.78e-09,25;CL:0000988,4.51e-07,32;CL:0002032,4.51e-07,32;CL:0000037,4.51e-07,32;CL:0000837,4.51e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.03e-14,22;UBERON:0004765,2.03e-14,22;UBERON:0001434,2.03e-14,22;UBERON:0002371,4.38e-14,16;UBERON:0002384,6.80e-12,46;UBERON:0002394,6.88e-10,1;UBERON:0001281,6.88e-10,1;UBERON:0000353,6.88e-10,1;UBERON:0003497,6.88e-10,1;UBERON:0003909,6.88e-10,1;UBERON:0003928,6.88e-10,1;UBERON:0003835,6.88e-10,1;UBERON:0003513,6.88e-10,1;UBERON:0001280,6.88e-10,1;UBERON:0004647,6.88e-10,1;UBERON:0002294,6.88e-10,1;UBERON:0001173,6.88e-10,1;UBERON:0004912,6.88e-10,1;UBERON:0005171,6.88e-10,1;UBERON:0002204,7.01e-10,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0,0.513653904676515,0.239316476986009,0.171200729931206,0,0,18.4252493324742,6.99561878128147,3.47008381894061,3.29074640653773,5.51706547337439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.226714680320357,3.18850937571846,0,0,0,0,0,0,0,1.29893002301434,3.5333957451034,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448569283047378,0,0,0,0,0,0,0,0,0,5.15559547031063,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0,0.513653904676515,0.239316476986009,0.171200729931206,0,0,18.4252493324742,6.99561878128147,3.47008381894061,3.29074640653773,5.51706547337439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.226714680320357,3.18850937571846,0,0,0,0,0,0,0,1.29893002301434,3.5333957451034,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448569283047378,0,0,0,0,0,0,0,0,0,5.15559547031063,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr9:3018760..3018779,+ | |||
}} | }} |
Latest revision as of 23:39, 4 August 2015
Short description: | p@chr9:3018760..3018779, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:3018760..3018779, + |
Coexpression cluster: | MCL_coexpression_mm9:721 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.50e-37 | 6 |
megakaryocyte | 3.50e-37 | 6 |
megakaryocyte-erythroid progenitor cell | 6.88e-25 | 9 |
myeloid lineage restricted progenitor cell | 2.68e-17 | 13 |
myeloid cell | 4.38e-14 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 3.66e-13 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 3.66e-13 | 3 |
Kit-positive megakaryocyte progenitor cell | 3.66e-13 | 3 |
connective tissue cell | 6.80e-12 | 46 |
mesenchymal cell | 6.80e-12 | 46 |
common myeloid progenitor | 7.02e-12 | 19 |
motile cell | 4.53e-10 | 54 |
lining cell | 6.88e-10 | 1 |
meso-epithelial cell | 6.88e-10 | 1 |
endothelial cell | 6.88e-10 | 1 |
endothelial cell of sinusoid | 6.88e-10 | 1 |
endothelial cell of hepatic sinusoid | 6.88e-10 | 1 |
hematopoietic lineage restricted progenitor cell | 4.78e-09 | 25 |
hematopoietic cell | 4.51e-07 | 32 |
hematopoietic oligopotent progenitor cell | 4.51e-07 | 32 |
hematopoietic stem cell | 4.51e-07 | 32 |
hematopoietic multipotent progenitor cell | 4.51e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
bone element | 2.03e-14 | 22 |
skeletal element | 2.03e-14 | 22 |
skeletal system | 2.03e-14 | 22 |
bone marrow | 4.38e-14 | 16 |
connective tissue | 6.80e-12 | 46 |
bile duct | 6.88e-10 | 1 |
hepatic sinusoid | 6.88e-10 | 1 |
parenchyma | 6.88e-10 | 1 |
abdomen blood vessel | 6.88e-10 | 1 |
sinusoid | 6.88e-10 | 1 |
digestive system duct | 6.88e-10 | 1 |
abdominal segment blood vessel | 6.88e-10 | 1 |
trunk blood vessel | 6.88e-10 | 1 |
liver parenchyma | 6.88e-10 | 1 |
liver lobule | 6.88e-10 | 1 |
biliary system | 6.88e-10 | 1 |
biliary tree | 6.88e-10 | 1 |
biliary bud | 6.88e-10 | 1 |
hepatic duct | 6.88e-10 | 1 |
musculoskeletal system | 7.01e-10 | 32 |