FFCP PHASE1:Mm9::chr7:31339942..31339958,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1000|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:31339942..31339958,+|id=chr7:31339942..31339958,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,1.68e-11,8;CL:0000333,3.77e-09,10;CL:0000095,3.77e-09,10;CL:0000243,3.77e-09,10;CL:0000123,3.77e-09,10;CL:0000125,3.77e-09,10;CL:0000030,3.77e-09,10;CL:0000339,3.77e-09,10;CL:0002605,1.39e-08,2;CL:0002604,1.39e-08,2;CL:0000878,3.49e-08,2;CL:0000129,3.49e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!4.45e-09!23;UBERON:0001009!4.45e-09!23;UBERON:0007100!3.00e-08!18;UBERON:0000948!3.00e-08!18;UBERON:0005498!3.00e-08!18;UBERON:0004140!3.00e-08!18;UBERON:0009881!3.00e-08!18;UBERON:0004141!3.00e-08!18;UBERON:0003084!3.00e-08!18;UBERON:0007005!3.00e-08!18;UBERON:0004139!3.00e-08!18;UBERON:0004291!3.00e-08!18|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.46e-07,5;UBERON:0002472,1.46e-07,5;UBERON:0008784,1.46e-07,5;UBERON:0006058,1.46e-07,5;UBERON:0004709,1.46e-07,5;UBERON:0002529,1.46e-07,5;UBERON:0010538,1.46e-07,5;UBERON:0005420,1.46e-07,5;UBERON:0010758,1.46e-07,5;UBERON:0000978,1.46e-07,5;UBERON:0002103,1.46e-07,5;UBERON:0000376,1.46e-07,5;UBERON:0000154,1.46e-07,5;UBERON:0010709,1.46e-07,5;UBERON:0005730,1.46e-07,5;UBERON:0007100,8.78e-07,18;UBERON:0000948,8.78e-07,18;UBERON:0005498,8.78e-07,18;UBERON:0004140,8.78e-07,18;UBERON:0009881,8.78e-07,18;UBERON:0004141,8.78e-07,18;UBERON:0003084,8.78e-07,18;UBERON:0007005,8.78e-07,18;UBERON:0004139,8.78e-07,18;UBERON:0004291,8.78e-07,18|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0,0,0,0.255129870453209,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0,2.61630187656536,2.19686182734472,4.47188767870852,0.839918529752175,0,0,0,0.336093799142464,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,0,1.97773272513395,0,1.79760066311043,3.07374644257244,0,0.135005938331691,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.284743361598206,0.186399445825301,0,0.0755715601067855,0.579728977403356,0,0,0.539703191637817,0,0,2.10666630197628,0.852151612890289,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0.150722640552623,0.352766121407114,0.251333182659351,0,0.578397427679647,4.42305275974937,0.323533699894818,0.883366073841574,2.42437626567611,0,0,0.209446706813455,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.373220911830279,0,1.89397670297827,0.260240885925407,0,0,0,0,0,0.0937017245597288,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.771335564436891,0.697601834251224,0.804820204198858,0.583826711835847,1.48103864922132,2.13417703302824,2.10778904819225,2.92399974850665,4.39100230582101,2.28150911892632,0.210289948564127,0,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0,0.397912944082302,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0.252578877947112,0.538192240565737,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0,0,0,0.163934945376675,9.3414243065618,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0.485561272309963,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0.220528398054962,2.14352128823924,0.161464426695906,0.301564624640779,0.238744688006273,0,0,0.18542530201051,0,0,0.370389054739423,0,0.136694227721025,0,0,0,0,2.86401185404534,0,0,0.216010681643603,0.418176592028937,0.436725127492355,0.674321731924103,0.165306911450672,0.523511883968059,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.864090018773596,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,6.34845074122592,0,0,0,1.35232715822533,0.187682475451182,0,0.214368379079066,0.501572104035363,0.564751842617067,0,0.572895513439397,0,0,0,0.675022500231806,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0,0.187283014939765,0.128050304809739,0.34461281373368,0,0.579421629724277,0,0,0.294397840268795,0.685738504770831,0,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0.73171189149109,0.263069711437843,0.407412341537585,0.561142271657738,0.237270036248348,0,0,0,0.385813221962283,0.499621155875892,0.701794825336225,0.859484216193193,0.956441660344217,1.10295709559758,1.15933917810211|short_description=p@chr7:31339942..31339958,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1000 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:31339942..31339958,+ | |||
|description=CAGE_peak_at_chr7:31339942..31339958,+ | |||
|id=chr7:31339942..31339958,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.68e-11,8;CL:0000333,3.77e-09,10;CL:0000095,3.77e-09,10;CL:0000243,3.77e-09,10;CL:0000123,3.77e-09,10;CL:0000125,3.77e-09,10;CL:0000030,3.77e-09,10;CL:0000339,3.77e-09,10;CL:0002605,1.39e-08,2;CL:0002604,1.39e-08,2;CL:0000878,3.49e-08,2;CL:0000129,3.49e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!4.45e-09!23;UBERON:0001009!4.45e-09!23;UBERON:0007100!3.00e-08!18;UBERON:0000948!3.00e-08!18;UBERON:0005498!3.00e-08!18;UBERON:0004140!3.00e-08!18;UBERON:0009881!3.00e-08!18;UBERON:0004141!3.00e-08!18;UBERON:0003084!3.00e-08!18;UBERON:0007005!3.00e-08!18;UBERON:0004139!3.00e-08!18;UBERON:0004291!3.00e-08!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.46e-07,5;UBERON:0002472,1.46e-07,5;UBERON:0008784,1.46e-07,5;UBERON:0006058,1.46e-07,5;UBERON:0004709,1.46e-07,5;UBERON:0002529,1.46e-07,5;UBERON:0010538,1.46e-07,5;UBERON:0005420,1.46e-07,5;UBERON:0010758,1.46e-07,5;UBERON:0000978,1.46e-07,5;UBERON:0002103,1.46e-07,5;UBERON:0000376,1.46e-07,5;UBERON:0000154,1.46e-07,5;UBERON:0010709,1.46e-07,5;UBERON:0005730,1.46e-07,5;UBERON:0007100,8.78e-07,18;UBERON:0000948,8.78e-07,18;UBERON:0005498,8.78e-07,18;UBERON:0004140,8.78e-07,18;UBERON:0009881,8.78e-07,18;UBERON:0004141,8.78e-07,18;UBERON:0003084,8.78e-07,18;UBERON:0007005,8.78e-07,18;UBERON:0004139,8.78e-07,18;UBERON:0004291,8.78e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0,0,0,0.255129870453209,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0,2.61630187656536,2.19686182734472,4.47188767870852,0.839918529752175,0,0,0,0.336093799142464,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,0,1.97773272513395,0,1.79760066311043,3.07374644257244,0,0.135005938331691,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.284743361598206,0.186399445825301,0,0.0755715601067855,0.579728977403356,0,0,0.539703191637817,0,0,2.10666630197628,0.852151612890289,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0.150722640552623,0.352766121407114,0.251333182659351,0,0.578397427679647,4.42305275974937,0.323533699894818,0.883366073841574,2.42437626567611,0,0,0.209446706813455,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.373220911830279,0,1.89397670297827,0.260240885925407,0,0,0,0,0,0.0937017245597288,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.771335564436891,0.697601834251224,0.804820204198858,0.583826711835847,1.48103864922132,2.13417703302824,2.10778904819225,2.92399974850665,4.39100230582101,2.28150911892632,0.210289948564127,0,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0,0.397912944082302,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0.252578877947112,0.538192240565737,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0,0,0,0.163934945376675,9.3414243065618,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0.485561272309963,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0.220528398054962,2.14352128823924,0.161464426695906,0.301564624640779,0.238744688006273,0,0,0.18542530201051,0,0,0.370389054739423,0,0.136694227721025,0,0,0,0,2.86401185404534,0,0,0.216010681643603,0.418176592028937,0.436725127492355,0.674321731924103,0.165306911450672,0.523511883968059,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.864090018773596,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,6.34845074122592,0,0,0,1.35232715822533,0.187682475451182,0,0.214368379079066,0.501572104035363,0.564751842617067,0,0.572895513439397,0,0,0,0.675022500231806,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0,0.187283014939765,0.128050304809739,0.34461281373368,0,0.579421629724277,0,0,0.294397840268795,0.685738504770831,0,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0.73171189149109,0.263069711437843,0.407412341537585,0.561142271657738,0.237270036248348,0,0,0,0.385813221962283,0.499621155875892,0.701794825336225,0.859484216193193,0.956441660344217,1.10295709559758,1.15933917810211 | |||
|short_description=p@chr7:31339942..31339958,+ | |||
}} |
Latest revision as of 01:24, 5 August 2015
Short description: | p@chr7:31339942..31339958, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:31339942..31339958, + |
Coexpression cluster: | MCL_coexpression_mm9:1000 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.68e-11 | 8 |
migratory neural crest cell | 3.77e-09 | 10 |
neuron associated cell | 3.77e-09 | 10 |
glial cell (sensu Vertebrata) | 3.77e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 3.77e-09 | 10 |
glial cell | 3.77e-09 | 10 |
glioblast | 3.77e-09 | 10 |
glioblast (sensu Vertebrata) | 3.77e-09 | 10 |
astrocyte of the cerebral cortex | 1.39e-08 | 2 |
astrocyte of the hippocampus | 1.39e-08 | 2 |
central nervous system macrophage | 3.49e-08 | 2 |
microglial cell | 3.49e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 1.46e-07 | 5 |
stylopod | 1.46e-07 | 5 |
lower limb segment | 1.46e-07 | 5 |
multi-limb segment region | 1.46e-07 | 5 |
pelvic appendage | 1.46e-07 | 5 |
limb segment | 1.46e-07 | 5 |
paired limb/fin segment | 1.46e-07 | 5 |
pelvic appendage bud | 1.46e-07 | 5 |
subdivision of organism along appendicular axis | 1.46e-07 | 5 |
leg | 1.46e-07 | 5 |
hindlimb | 1.46e-07 | 5 |
hindlimb stylopod | 1.46e-07 | 5 |
posterior region of body | 1.46e-07 | 5 |
pelvic complex | 1.46e-07 | 5 |
hindlimb/pelvic fin field | 1.46e-07 | 5 |
primary circulatory organ | 8.78e-07 | 18 |
heart | 8.78e-07 | 18 |
primitive heart tube | 8.78e-07 | 18 |
primary heart field | 8.78e-07 | 18 |
anterior lateral plate mesoderm | 8.78e-07 | 18 |
heart tube | 8.78e-07 | 18 |
heart primordium | 8.78e-07 | 18 |
cardiac mesoderm | 8.78e-07 | 18 |
cardiogenic plate | 8.78e-07 | 18 |
heart rudiment | 8.78e-07 | 18 |