FFCP PHASE1:Mm9::chr12:57636278..57636289,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=139 | |MCL_coexpression_id=139 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:57636278..57636289,+ | |||
|description=CAGE_peak_at_chr12:57636278..57636289,+ | |description=CAGE_peak_at_chr12:57636278..57636289,+ | ||
|id=chr12:57636278..57636289,+ | |id=chr12:57636278..57636289,+ | ||
|ontology_enrichment_celltype=CL:0002613!4.05e-07!3 | |ontology_enrichment_celltype=CL:0002613!4.05e-07!3 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!7.20e-26!17;UBERON:0005181!7.20e-26!17;UBERON:0002224!7.20e-26!17;UBERON:0000915!7.20e-26!17;UBERON:0008947!7.20e-26!17;UBERON:0003258!7.20e-26!17;UBERON:0002048!1.13e-23!14;UBERON:0000117!1.13e-23!14;UBERON:0000171!1.13e-23!14;UBERON:0000170!1.13e-23!14;UBERON:0005597!1.13e-23!14;UBERON:0000118!1.13e-23!14;UBERON:0005153!5.83e-19!17;UBERON:0005157!7.71e-11!27;UBERON:0000065!1.17e-08!41;UBERON:0001004!2.27e-08!42;UBERON:0000310!9.76e-07!6;UBERON:0001443!9.76e-07!6 | |ontology_enrichment_uberon=UBERON:0005178!7.20e-26!17;UBERON:0005181!7.20e-26!17;UBERON:0002224!7.20e-26!17;UBERON:0000915!7.20e-26!17;UBERON:0008947!7.20e-26!17;UBERON:0003258!7.20e-26!17;UBERON:0002048!1.13e-23!14;UBERON:0000117!1.13e-23!14;UBERON:0000171!1.13e-23!14;UBERON:0000170!1.13e-23!14;UBERON:0005597!1.13e-23!14;UBERON:0000118!1.13e-23!14;UBERON:0005153!5.83e-19!17;UBERON:0005157!7.71e-11!27;UBERON:0000065!1.17e-08!41;UBERON:0001004!2.27e-08!42;UBERON:0000310!9.76e-07!6;UBERON:0001443!9.76e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,5.50e-58,14;UBERON:0000117,5.50e-58,14;UBERON:0000171,5.50e-58,14;UBERON:0000170,5.50e-58,14;UBERON:0005597,5.50e-58,14;UBERON:0000118,5.50e-58,14;UBERON:0005178,2.01e-56,17;UBERON:0005181,2.01e-56,17;UBERON:0002224,2.01e-56,17;UBERON:0000915,2.01e-56,17;UBERON:0008947,2.01e-56,17;UBERON:0003258,2.01e-56,17;UBERON:0005153,1.28e-47,17;UBERON:0005157,2.35e-40,20;UBERON:0000065,7.39e-23,41;UBERON:0001004,2.74e-22,42;UBERON:0009569,8.67e-14,66;UBERON:0005177,2.52e-11,79;UBERON:0001041,3.61e-11,80;UBERON:0005911,5.55e-11,69;UBERON:0000310,8.77e-11,6;UBERON:0001443,8.77e-11,6;UBERON:0002100,8.61e-10,90;UBERON:0004921,1.86e-07,114;UBERON:0001007,2.63e-07,116;UBERON:0001555,2.63e-07,116;UBERON:0007026,2.63e-07,116;UBERON:0004119,3.69e-07,118;UBERON:0000925,3.69e-07,118;UBERON:0006595,3.69e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395658863190582,0.274462930807229,0.52091337055676,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432982082022428,0,1.01104889002957,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,2.03228509183265,0,0,0.848725428875941,2.58159273117352,3.68513766371995,3.80869825417622,5.07347484430277,2.20689201748667,2.6575762757853,1.2756381492599,2.94953966488328,2.93564469172023,4.91806799177139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.561849044819294,0.320125762024346,0.459483751644906,0,0,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.953744759789284,0.290692833264657,0.376437521661322,0.0846146078916765,0,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395658863190582,0.274462930807229,0.52091337055676,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432982082022428,0,1.01104889002957,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,2.03228509183265,0,0,0.848725428875941,2.58159273117352,3.68513766371995,3.80869825417622,5.07347484430277,2.20689201748667,2.6575762757853,1.2756381492599,2.94953966488328,2.93564469172023,4.91806799177139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.561849044819294,0.320125762024346,0.459483751644906,0,0,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.953744759789284,0.290692833264657,0.376437521661322,0.0846146078916765,0,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr12:57636278..57636289,+ | |short_description=p@chr12:57636278..57636289,+ | ||
}} | }} |
Latest revision as of 03:12, 5 August 2015
Short description: | p@chr12:57636278..57636289, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:57636278..57636289, + |
Coexpression cluster: | MCL_coexpression_mm9:139 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 5.50e-58 | 14 |
respiratory tube | 5.50e-58 | 14 |
respiration organ | 5.50e-58 | 14 |
pair of lungs | 5.50e-58 | 14 |
lung primordium | 5.50e-58 | 14 |
lung bud | 5.50e-58 | 14 |
thoracic cavity element | 2.01e-56 | 17 |
thoracic segment organ | 2.01e-56 | 17 |
thoracic cavity | 2.01e-56 | 17 |
thoracic segment of trunk | 2.01e-56 | 17 |
respiratory primordium | 2.01e-56 | 17 |
endoderm of foregut | 2.01e-56 | 17 |
epithelial bud | 1.28e-47 | 17 |
epithelial fold | 2.35e-40 | 20 |
respiratory tract | 7.39e-23 | 41 |
respiratory system | 2.74e-22 | 42 |
subdivision of trunk | 8.67e-14 | 66 |
trunk region element | 2.52e-11 | 79 |
foregut | 3.61e-11 | 80 |
endo-epithelium | 5.55e-11 | 69 |
breast | 8.77e-11 | 6 |
chest | 8.77e-11 | 6 |
trunk | 8.61e-10 | 90 |
subdivision of digestive tract | 1.86e-07 | 114 |
digestive system | 2.63e-07 | 116 |
digestive tract | 2.63e-07 | 116 |
primitive gut | 2.63e-07 | 116 |
endoderm-derived structure | 3.69e-07 | 118 |
endoderm | 3.69e-07 | 118 |
presumptive endoderm | 3.69e-07 | 118 |