FFCP PHASE1:Mm9::chr2:62163994..62163996,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=135 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:62163994..62163996,+ | |||
|description=CAGE_peak_at_chr2:62163994..62163996,+ | |description=CAGE_peak_at_chr2:62163994..62163996,+ | ||
|id=chr2:62163994..62163996,+ | |id=chr2:62163994..62163996,+ | ||
|ontology_enrichment_celltype=CL:0002612!4.22e-08!3 | |ontology_enrichment_celltype=CL:0002612!4.22e-08!3 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.26e-28!52;UBERON:0005068!1.26e-28!52;UBERON:0006241!1.26e-28!52;UBERON:0007135!1.26e-28!52;UBERON:0002616!7.16e-26!49;UBERON:0000955!3.04e-25!50;UBERON:0006238!3.04e-25!50;UBERON:0000073!2.90e-23!75;UBERON:0001016!2.90e-23!75;UBERON:0001017!2.57e-22!73;UBERON:0005743!2.57e-22!73;UBERON:0002021!1.51e-21!10;UBERON:0000411!1.51e-21!10;UBERON:0001950!1.51e-21!10;UBERON:0003080!6.60e-20!40;UBERON:0002346!2.14e-19!71;UBERON:0003075!2.14e-19!71;UBERON:0007284!2.14e-19!71;UBERON:0002020!3.21e-19!34;UBERON:0000033!6.83e-19!63;UBERON:0002780!3.25e-18!39;UBERON:0001890!3.25e-18!39;UBERON:0006240!3.25e-18!39;UBERON:0002619!1.78e-17!17;UBERON:0002791!1.51e-15!29;UBERON:0003528!1.51e-15!29;UBERON:0001893!1.51e-15!29;UBERON:0004121!1.94e-15!102;UBERON:0000924!1.94e-15!102;UBERON:0006601!1.94e-15!102;UBERON:0003056!2.01e-15!49;UBERON:0000956!1.09e-13!21;UBERON:0001869!1.09e-13!21;UBERON:0000203!1.09e-13!21;UBERON:0007811!1.32e-13!86;UBERON:0000153!5.78e-12!94;UBERON:0002298!2.73e-10!6;UBERON:0000025!7.12e-10!114;UBERON:0003076!3.17e-09!12;UBERON:0003057!3.17e-09!12;UBERON:0004111!7.59e-09!122;UBERON:0002257!4.22e-08!3;UBERON:0002240!9.16e-07!6;UBERON:0005174!9.16e-07!6;UBERON:0001137!9.16e-07!6 | |ontology_enrichment_uberon=UBERON:0001049!1.26e-28!52;UBERON:0005068!1.26e-28!52;UBERON:0006241!1.26e-28!52;UBERON:0007135!1.26e-28!52;UBERON:0002616!7.16e-26!49;UBERON:0000955!3.04e-25!50;UBERON:0006238!3.04e-25!50;UBERON:0000073!2.90e-23!75;UBERON:0001016!2.90e-23!75;UBERON:0001017!2.57e-22!73;UBERON:0005743!2.57e-22!73;UBERON:0002021!1.51e-21!10;UBERON:0000411!1.51e-21!10;UBERON:0001950!1.51e-21!10;UBERON:0003080!6.60e-20!40;UBERON:0002346!2.14e-19!71;UBERON:0003075!2.14e-19!71;UBERON:0007284!2.14e-19!71;UBERON:0002020!3.21e-19!34;UBERON:0000033!6.83e-19!63;UBERON:0002780!3.25e-18!39;UBERON:0001890!3.25e-18!39;UBERON:0006240!3.25e-18!39;UBERON:0002619!1.78e-17!17;UBERON:0002791!1.51e-15!29;UBERON:0003528!1.51e-15!29;UBERON:0001893!1.51e-15!29;UBERON:0004121!1.94e-15!102;UBERON:0000924!1.94e-15!102;UBERON:0006601!1.94e-15!102;UBERON:0003056!2.01e-15!49;UBERON:0000956!1.09e-13!21;UBERON:0001869!1.09e-13!21;UBERON:0000203!1.09e-13!21;UBERON:0007811!1.32e-13!86;UBERON:0000153!5.78e-12!94;UBERON:0002298!2.73e-10!6;UBERON:0000025!7.12e-10!114;UBERON:0003076!3.17e-09!12;UBERON:0003057!3.17e-09!12;UBERON:0004111!7.59e-09!122;UBERON:0002257!4.22e-08!3;UBERON:0002240!9.16e-07!6;UBERON:0005174!9.16e-07!6;UBERON:0001137!9.16e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.37e-35,10;UBERON:0000411,2.37e-35,10;UBERON:0001950,2.37e-35,10;UBERON:0002619,3.13e-21,17;UBERON:0000956,2.25e-17,21;UBERON:0001869,2.25e-17,21;UBERON:0000203,2.25e-17,21;UBERON:0003528,7.80e-13,29;UBERON:0002791,7.80e-13,29;UBERON:0001893,7.80e-13,29;UBERON:0002020,4.50e-11,34;UBERON:0002780,9.26e-10,39;UBERON:0001890,9.26e-10,39;UBERON:0006240,9.26e-10,39;UBERON:0003080,1.55e-09,40;UBERON:0002616,2.15e-08,46;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0003056,6.29e-08,49;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.768032666281217,0,0,0,0.279182999001381,0,0.763991238884051,0.294628585473668,0.284743361598206,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83778682725382,0,0,0,0,0.449371918214468,0.915001205637253,0,0,0.511430914660661,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,2.57779773515531,1.37016503954128,0.755393897389701,1.35004500046361,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.768032666281217,0,0,0,0.279182999001381,0,0.763991238884051,0.294628585473668,0.284743361598206,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83778682725382,0,0,0,0,0.449371918214468,0.915001205637253,0,0,0.511430914660661,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,2.57779773515531,1.37016503954128,0.755393897389701,1.35004500046361,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr2:62163994..62163996,+ | |short_description=p@chr2:62163994..62163996,+ | ||
}} | }} |
Latest revision as of 07:47, 5 August 2015
Short description: | p@chr2:62163994..62163996, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:62163994..62163996, + |
Coexpression cluster: | MCL_coexpression_mm9:135 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.37e-35 | 10 |
visual cortex | 2.37e-35 | 10 |
neocortex | 2.37e-35 | 10 |
regional part of cerebral cortex | 3.13e-21 | 17 |
cerebral cortex | 2.25e-17 | 21 |
cerebral hemisphere | 2.25e-17 | 21 |
pallium | 2.25e-17 | 21 |
brain grey matter | 7.80e-13 | 29 |
regional part of telencephalon | 7.80e-13 | 29 |
telencephalon | 7.80e-13 | 29 |
gray matter | 4.50e-11 | 34 |
regional part of forebrain | 9.26e-10 | 39 |
forebrain | 9.26e-10 | 39 |
future forebrain | 9.26e-10 | 39 |
anterior neural tube | 1.55e-09 | 40 |
regional part of brain | 2.15e-08 | 46 |
brain | 3.12e-08 | 47 |
future brain | 3.12e-08 | 47 |
pre-chordal neural plate | 6.29e-08 | 49 |
neural tube | 1.63e-07 | 52 |
neural rod | 1.63e-07 | 52 |
future spinal cord | 1.63e-07 | 52 |
neural keel | 1.63e-07 | 52 |
regional part of nervous system | 2.91e-07 | 54 |