FFCP PHASE1:Mm9::chr7:52882852..52882863,+: Difference between revisions
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{{FFCP|EntrezGene=69903|HGNC=|MCL_coexpression_id=94|UniProt=Q3U0S6|association_with_transcript=0bp_to_ENSMUST00000057927_5end|description=CAGE_peak_2_at_Rasip1_5end|id=chr7:52882852..52882863,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!3.84e-13!66;UBERON:0005177!5.03e-13!85;UBERON:0002048!3.00e-10!14;UBERON:0000117!3.00e-10!14;UBERON:0000171!3.00e-10!14;UBERON:0000170!3.00e-10!14;UBERON:0005597!3.00e-10!14;UBERON:0000118!3.00e-10!14;UBERON:0001048!3.85e-09!147;UBERON:0000468!7.39e-09!333;UBERON:0002100!9.52e-09!98;UBERON:0000926!4.50e-08!193;UBERON:0004120!4.50e-08!193;UBERON:0006603!4.50e-08!193;UBERON:0005153!4.59e-08!17;UBERON:0005157!1.14e-07!27;UBERON:0007100!1.18e-07!18;UBERON:0000948!1.18e-07!18;UBERON:0005498!1.18e-07!18;UBERON:0004140!1.18e-07!18;UBERON:0009881!1.18e-07!18;UBERON:0004141!1.18e-07!18;UBERON:0003084!1.18e-07!18;UBERON:0007005!1.18e-07!18;UBERON:0004139!1.18e-07!18;UBERON:0004291!1.18e-07!18;UBERON:0005172!1.26e-07!49;UBERON:0005173!1.26e-07!49;UBERON:0002417!1.26e-07!49;UBERON:0000916!1.26e-07!49;UBERON:0000466!2.73e-07!79;UBERON:0004872!3.14e-07!33;UBERON:0005178!8.44e-07!17;UBERON:0005181!8.44e-07!17;UBERON:0002224!8.44e-07!17;UBERON:0000915!8.44e-07!17;UBERON:0008947!8.44e-07!17;UBERON:0003258!8.44e-07!17;UBERON:0003103!8.45e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.46e-17,14;UBERON:0000117,1.46e-17,14;UBERON:0000171,1.46e-17,14;UBERON:0000170,1.46e-17,14;UBERON:0005597,1.46e-17,14;UBERON:0000118,1.46e-17,14;UBERON:0009569,2.61e-15,66;UBERON:0005153,2.80e-15,17;UBERON:0005177,2.10e-14,79;UBERON:0007100,1.24e-13,18;UBERON:0000948,1.24e-13,18;UBERON:0005498,1.24e-13,18;UBERON:0004140,1.24e-13,18;UBERON:0009881,1.24e-13,18;UBERON:0004141,1.24e-13,18;UBERON:0003084,1.24e-13,18;UBERON:0007005,1.24e-13,18;UBERON:0004139,1.24e-13,18;UBERON:0004291,1.24e-13,18;UBERON:0005178,1.28e-13,17;UBERON:0005181,1.28e-13,17;UBERON:0002224,1.28e-13,17;UBERON:0000915,1.28e-13,17;UBERON:0008947,1.28e-13,17;UBERON:0003258,1.28e-13,17;UBERON:0005157,3.05e-12,20;UBERON:0003103,1.47e-11,43;UBERON:0004535,2.14e-11,23;UBERON:0001009,2.14e-11,23;UBERON:0002100,3.39e-11,90;UBERON:0004872,9.57e-11,33;UBERON:0001048,7.64e-08,134;UBERON:0000310,1.48e-07,6;UBERON:0001443,1.48e-07,6;UBERON:0000025,6.82e-07,114|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.202316460859598,0,1.26766280701236,0,0,0,0,0,0,0,0.518448061542388,0.135005938331691,0.420649922702764,0.571301968807607,0.220868540951614,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0.153606533256243,0.395658863190582,0.182975287204819,0,0.279182999001381,0.56276261003168,0.15279824777681,0.589257170947335,0.427115042397309,0.186399445825301,0.227178579999552,0.226714680320357,7.8263411949453,0.860423876981386,0,0,0,0.448026887097336,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,1.03909497345377,2.08182392119363,1.21786191324856,1.15307748628029,0.753613202763113,1.17588707135705,1.13099932196708,0.494389935468748,0.722996784599558,0.884610551949874,1.13236794963186,0.662524555381181,0.484875253135222,0,0.292780797011547,0.83778682725382,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,1.12023300235348,0.497627882440372,0,0,0.390361328888111,0.459804208866946,0.540186389416048,0.60281927134286,0.544291993210623,0.2562274405697,0.281105173679186,0.258703370739016,0.431135985865684,0.756424320671277,1.05570674498369,1.31517439456545,1.11218899690239,0.696504333044333,0.205782136407943,0.995171334092466,0,0,0,4.14251545071004,3.75241695969754,3.6012412292203,4.97163944728941,2.36117078096885,2.62254091908543,3.95307706075693,3.21928081679543,4.08678698285093,1.81015834904829,2.29834449710733,2.26992666728396,1.31579988682799,2.19550115291051,2.01309628140558,0.210289948564127,0.617427674275707,0,0.264450566663544,0.853153002140936,0.696710015581316,0.77320476793256,0.80673409849337,0.889512175379481,0.190225626112559,0,0.658795818896044,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.597423819763102,2.46568271239006,1.02823661348756,2.25415471346161,2.03651327845314,1.35766741017338,2.45475369616115,2.65593455921881,0.590440591918409,1.255989822731,1.60416313098341,0,0.83422552858047,0.786235980452812,0.449724224769707,0.202860121388503,0.241177159752417,0.763877555344259,1.72617682470486,1.45921704097532,0.823684239564244,4.31304619582064,0.744281895337007,0.936113019343682,1.01031551178845,0.717589654087649,0.964887042726734,2.95605104266567,1.51593129416388,3.09633455239849,1.86719594352707,2.58159273117352,2.84760637651087,4.52282917683426,5.65887578787617,4.57141917907954,5.53661724121937,4.30527875375215,4.58817281204066,2.9356446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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69903 | |||
|HGNC= | |||
|MCL_coexpression_id=94 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3U0S6 | |||
|association_with_transcript=0bp_to_ENSMUST00000057927_5end | |||
|cluster_id=chr7:52882852..52882863,+ | |||
|description=CAGE_peak_2_at_Rasip1_5end | |||
|id=chr7:52882852..52882863,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!3.84e-13!66;UBERON:0005177!5.03e-13!85;UBERON:0002048!3.00e-10!14;UBERON:0000117!3.00e-10!14;UBERON:0000171!3.00e-10!14;UBERON:0000170!3.00e-10!14;UBERON:0005597!3.00e-10!14;UBERON:0000118!3.00e-10!14;UBERON:0001048!3.85e-09!147;UBERON:0000468!7.39e-09!333;UBERON:0002100!9.52e-09!98;UBERON:0000926!4.50e-08!193;UBERON:0004120!4.50e-08!193;UBERON:0006603!4.50e-08!193;UBERON:0005153!4.59e-08!17;UBERON:0005157!1.14e-07!27;UBERON:0007100!1.18e-07!18;UBERON:0000948!1.18e-07!18;UBERON:0005498!1.18e-07!18;UBERON:0004140!1.18e-07!18;UBERON:0009881!1.18e-07!18;UBERON:0004141!1.18e-07!18;UBERON:0003084!1.18e-07!18;UBERON:0007005!1.18e-07!18;UBERON:0004139!1.18e-07!18;UBERON:0004291!1.18e-07!18;UBERON:0005172!1.26e-07!49;UBERON:0005173!1.26e-07!49;UBERON:0002417!1.26e-07!49;UBERON:0000916!1.26e-07!49;UBERON:0000466!2.73e-07!79;UBERON:0004872!3.14e-07!33;UBERON:0005178!8.44e-07!17;UBERON:0005181!8.44e-07!17;UBERON:0002224!8.44e-07!17;UBERON:0000915!8.44e-07!17;UBERON:0008947!8.44e-07!17;UBERON:0003258!8.44e-07!17;UBERON:0003103!8.45e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.46e-17,14;UBERON:0000117,1.46e-17,14;UBERON:0000171,1.46e-17,14;UBERON:0000170,1.46e-17,14;UBERON:0005597,1.46e-17,14;UBERON:0000118,1.46e-17,14;UBERON:0009569,2.61e-15,66;UBERON:0005153,2.80e-15,17;UBERON:0005177,2.10e-14,79;UBERON:0007100,1.24e-13,18;UBERON:0000948,1.24e-13,18;UBERON:0005498,1.24e-13,18;UBERON:0004140,1.24e-13,18;UBERON:0009881,1.24e-13,18;UBERON:0004141,1.24e-13,18;UBERON:0003084,1.24e-13,18;UBERON:0007005,1.24e-13,18;UBERON:0004139,1.24e-13,18;UBERON:0004291,1.24e-13,18;UBERON:0005178,1.28e-13,17;UBERON:0005181,1.28e-13,17;UBERON:0002224,1.28e-13,17;UBERON:0000915,1.28e-13,17;UBERON:0008947,1.28e-13,17;UBERON:0003258,1.28e-13,17;UBERON:0005157,3.05e-12,20;UBERON:0003103,1.47e-11,43;UBERON:0004535,2.14e-11,23;UBERON:0001009,2.14e-11,23;UBERON:0002100,3.39e-11,90;UBERON:0004872,9.57e-11,33;UBERON:0001048,7.64e-08,134;UBERON:0000310,1.48e-07,6;UBERON:0001443,1.48e-07,6;UBERON:0000025,6.82e-07,114 | |||
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|short_description=p2@Rasip1 | |||
}} |
Revision as of 08:57, 5 August 2015
Short description: | p2@Rasip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rasip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:94 |
Association with transcript: | 0bp_to_ENSMUST00000057927_5end |
EntrezGene: | 69903 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 1.46e-17 | 14 |
respiratory tube | 1.46e-17 | 14 |
respiration organ | 1.46e-17 | 14 |
pair of lungs | 1.46e-17 | 14 |
lung primordium | 1.46e-17 | 14 |
lung bud | 1.46e-17 | 14 |
subdivision of trunk | 2.61e-15 | 66 |
epithelial bud | 2.80e-15 | 17 |
trunk region element | 2.10e-14 | 79 |
primary circulatory organ | 1.24e-13 | 18 |
heart | 1.24e-13 | 18 |
primitive heart tube | 1.24e-13 | 18 |
primary heart field | 1.24e-13 | 18 |
anterior lateral plate mesoderm | 1.24e-13 | 18 |
heart tube | 1.24e-13 | 18 |
heart primordium | 1.24e-13 | 18 |
cardiac mesoderm | 1.24e-13 | 18 |
cardiogenic plate | 1.24e-13 | 18 |
heart rudiment | 1.24e-13 | 18 |
thoracic cavity element | 1.28e-13 | 17 |
thoracic segment organ | 1.28e-13 | 17 |
thoracic cavity | 1.28e-13 | 17 |
thoracic segment of trunk | 1.28e-13 | 17 |
respiratory primordium | 1.28e-13 | 17 |
endoderm of foregut | 1.28e-13 | 17 |
epithelial fold | 3.05e-12 | 20 |
compound organ | 1.47e-11 | 43 |
cardiovascular system | 2.14e-11 | 23 |
circulatory system | 2.14e-11 | 23 |
trunk | 3.39e-11 | 90 |
splanchnic layer of lateral plate mesoderm | 9.57e-11 | 33 |
primordium | 7.64e-08 | 134 |
breast | 1.48e-07 | 6 |
chest | 1.48e-07 | 6 |
tube | 6.82e-07 | 114 |