FFCP PHASE1:Mm9::chr1:187242150..187242173,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1723 | |MCL_coexpression_id=1723 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:187242150..187242173,+ | |||
|description=CAGE_peak_at_chr1:187242150..187242173,+ | |description=CAGE_peak_at_chr1:187242150..187242173,+ | ||
|id=chr1:187242150..187242173,+ | |id=chr1:187242150..187242173,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.98e-10!23;CL:0000337!2.98e-10!23;CL:0000540!1.94e-08!33;CL:0000047!1.94e-08!33;CL:0000031!1.94e-08!33;CL:0000404!1.94e-08!33;CL:0000393!1.96e-07!39;CL:0000211!1.96e-07!39 | |ontology_enrichment_celltype=CL:0000117!2.98e-10!23;CL:0000337!2.98e-10!23;CL:0000540!1.94e-08!33;CL:0000047!1.94e-08!33;CL:0000031!1.94e-08!33;CL:0000404!1.94e-08!33;CL:0000393!1.96e-07!39;CL:0000211!1.96e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,4.54e-30,3;CL:0000117,7.83e-27,23;CL:0000337,7.83e-27,23;CL:0002611,6.10e-20,2;CL:0000540,1.13e-18,33;CL:0000047,1.13e-18,33;CL:0000031,1.13e-18,33;CL:0000404,1.13e-18,33;CL:0000393,8.87e-16,39;CL:0000211,8.87e-16,39;CL:0002614,2.70e-14,3;CL:0002319,2.71e-14,43;CL:0000221,5.79e-14,44;CL:0000133,5.79e-14,44;CL:0002321,1.12e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.25e-14!52;UBERON:0005068!4.25e-14!52;UBERON:0006241!4.25e-14!52;UBERON:0007135!4.25e-14!52;UBERON:0000073!6.05e-14!75;UBERON:0001016!6.05e-14!75;UBERON:0002020!1.19e-13!34;UBERON:0001017!1.46e-13!73;UBERON:0005743!1.46e-13!73;UBERON:0002616!2.48e-11!49;UBERON:0000955!5.54e-11!50;UBERON:0006238!5.54e-11!50;UBERON:0002240!2.13e-10!6;UBERON:0005174!2.13e-10!6;UBERON:0001137!2.13e-10!6;UBERON:0004121!2.26e-10!102;UBERON:0000924!2.26e-10!102;UBERON:0006601!2.26e-10!102;UBERON:0000033!2.05e-09!63;UBERON:0002346!2.13e-09!71;UBERON:0003075!2.13e-09!71;UBERON:0007284!2.13e-09!71;UBERON:0003080!3.76e-09!40;UBERON:0001948!4.86e-09!5;UBERON:0002315!4.86e-09!5;UBERON:0002780!2.66e-08!39;UBERON:0001890!2.66e-08!39;UBERON:0006240!2.66e-08!39;UBERON:0002791!3.06e-08!29;UBERON:0003528!3.06e-08!29;UBERON:0001893!3.06e-08!29;UBERON:0002950!8.44e-08!4;UBERON:0001891!8.44e-08!4;UBERON:0009616!8.44e-08!4;UBERON:0002021!1.03e-07!10;UBERON:0000411!1.03e-07!10;UBERON:0001950!1.03e-07!10;UBERON:0002298!1.72e-07!6;UBERON:0007811!3.86e-07!86 | |ontology_enrichment_uberon=UBERON:0001049!4.25e-14!52;UBERON:0005068!4.25e-14!52;UBERON:0006241!4.25e-14!52;UBERON:0007135!4.25e-14!52;UBERON:0000073!6.05e-14!75;UBERON:0001016!6.05e-14!75;UBERON:0002020!1.19e-13!34;UBERON:0001017!1.46e-13!73;UBERON:0005743!1.46e-13!73;UBERON:0002616!2.48e-11!49;UBERON:0000955!5.54e-11!50;UBERON:0006238!5.54e-11!50;UBERON:0002240!2.13e-10!6;UBERON:0005174!2.13e-10!6;UBERON:0001137!2.13e-10!6;UBERON:0004121!2.26e-10!102;UBERON:0000924!2.26e-10!102;UBERON:0006601!2.26e-10!102;UBERON:0000033!2.05e-09!63;UBERON:0002346!2.13e-09!71;UBERON:0003075!2.13e-09!71;UBERON:0007284!2.13e-09!71;UBERON:0003080!3.76e-09!40;UBERON:0001948!4.86e-09!5;UBERON:0002315!4.86e-09!5;UBERON:0002780!2.66e-08!39;UBERON:0001890!2.66e-08!39;UBERON:0006240!2.66e-08!39;UBERON:0002791!3.06e-08!29;UBERON:0003528!3.06e-08!29;UBERON:0001893!3.06e-08!29;UBERON:0002950!8.44e-08!4;UBERON:0001891!8.44e-08!4;UBERON:0009616!8.44e-08!4;UBERON:0002021!1.03e-07!10;UBERON:0000411!1.03e-07!10;UBERON:0001950!1.03e-07!10;UBERON:0002298!1.72e-07!6;UBERON:0007811!3.86e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,4.54e-30,3;UBERON:0002275,4.54e-30,3;UBERON:0002256,6.10e-20,2;UBERON:0001948,1.00e-17,5;UBERON:0002315,1.00e-17,5;UBERON:0002240,6.80e-15,6;UBERON:0005174,6.80e-15,6;UBERON:0001137,6.80e-15,6;UBERON:0000073,2.22e-14,54;UBERON:0002038,2.70e-14,3;UBERON:0009663,2.70e-14,3;UBERON:0009661,2.70e-14,3;UBERON:0000125,2.70e-14,3;UBERON:0002308,2.70e-14,3;UBERON:0002950,5.77e-11,4;UBERON:0001891,5.77e-11,4;UBERON:0009616,5.77e-11,4;UBERON:0010286,5.77e-11,4;UBERON:0001017,1.45e-10,73;UBERON:0001016,2.82e-10,75;UBERON:0002020,2.91e-10,34;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95;UBERON:0003076,9.06e-08,12;UBERON:0003057,9.06e-08,12 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,1.10434270475807,0.122490799214954,0,0,2.20231761998777,4.72443150915195,1.38245879930619,0,0.182975287204819,0,2.51264699101243,0.56276261003168,2.59757021220577,1.17851434189467,0.854230084794618,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.299581278809645,0.457500602818626,0,0,0.255715457330331,0,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428674070063185,0.177340233642274,0,0,0,0,0.21183207086382,0,0,0,0,0.119372344003136,0,0,0.370850604021019,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0.209088296014469,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,1.71868654031819,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0,0,0,0.294397840268795,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,1.10434270475807,0.122490799214954,0,0,2.20231761998777,4.72443150915195,1.38245879930619,0,0.182975287204819,0,2.51264699101243,0.56276261003168,2.59757021220577,1.17851434189467,0.854230084794618,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.299581278809645,0.457500602818626,0,0,0.255715457330331,0,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428674070063185,0.177340233642274,0,0,0,0,0.21183207086382,0,0,0,0,0.119372344003136,0,0,0.370850604021019,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0.209088296014469,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,1.71868654031819,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0,0,0,0.294397840268795,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:187242150..187242173,+ | |short_description=p@chr1:187242150..187242173,+ | ||
}} | }} |
Latest revision as of 11:01, 5 August 2015
Short description: | p@chr1:187242150..187242173, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:187242150..187242173, + |
Coexpression cluster: | MCL_coexpression_mm9:1723 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 4.54e-30 | 3 |
CNS neuron (sensu Vertebrata) | 7.83e-27 | 23 |
neuroblast (sensu Vertebrata) | 7.83e-27 | 23 |
neuron of the dorsal spinal cord | 6.10e-20 | 2 |
neuron | 1.13e-18 | 33 |
neuronal stem cell | 1.13e-18 | 33 |
neuroblast | 1.13e-18 | 33 |
electrically signaling cell | 1.13e-18 | 33 |
electrically responsive cell | 8.87e-16 | 39 |
electrically active cell | 8.87e-16 | 39 |
neuron of the substantia nigra | 2.70e-14 | 3 |
neural cell | 2.71e-14 | 43 |
ectodermal cell | 5.79e-14 | 44 |
neurectodermal cell | 5.79e-14 | 44 |
embryonic cell | 1.12e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 4.54e-30 | 3 |
reticular formation | 4.54e-30 | 3 |
dorsal horn of spinal cord | 6.10e-20 | 2 |
regional part of spinal cord | 1.00e-17 | 5 |
gray matter of spinal cord | 1.00e-17 | 5 |
spinal cord | 6.80e-15 | 6 |
dorsal region element | 6.80e-15 | 6 |
dorsum | 6.80e-15 | 6 |
regional part of nervous system | 2.22e-14 | 54 |
substantia nigra | 2.70e-14 | 3 |
telencephalic nucleus | 2.70e-14 | 3 |
midbrain nucleus | 2.70e-14 | 3 |
neural nucleus | 2.70e-14 | 3 |
nucleus of brain | 2.70e-14 | 3 |
regional part of midbrain | 5.77e-11 | 4 |
midbrain | 5.77e-11 | 4 |
presumptive midbrain | 5.77e-11 | 4 |
midbrain neural tube | 5.77e-11 | 4 |
central nervous system | 1.45e-10 | 73 |
nervous system | 2.82e-10 | 75 |
gray matter | 2.91e-10 | 34 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |
posterior neural tube | 9.06e-08 | 12 |
chordal neural plate | 9.06e-08 | 12 |