Personal tools

FFCP PHASE1:Mm9::chr9:66440836..66440848,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=235441|HGNC=|UniProt=E9Q8W9|association_with_transcript=0bp_to_ENSMUST00000098613_5end|description=CAGE_peak_6_at_Usp3_5end|id=chr9:66440836..66440848,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002609,2.62e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000955,1.06e-08,47;UBERON:0006238,1.06e-08,47;UBERON:0002616,5.67e-08,46;UBERON:0003528,3.28e-07,29;UBERON:0002791,3.28e-07,29;UBERON:0001893,3.28e-07,29;UBERON:0002780,3.95e-07,39;UBERON:0001890,3.95e-07,39;UBERON:0006240,3.95e-07,39;UBERON:0000369,4.82e-07,5;UBERON:0002435,4.82e-07,5;UBERON:0000204,4.82e-07,5;UBERON:0010082,4.82e-07,5;UBERON:0010371,5.57e-07,73;UBERON:0001049,5.68e-07,52;UBERON:0005068,5.68e-07,52;UBERON:0006241,5.68e-07,52;UBERON:0007135,5.68e-07,52;UBERON:0002346,6.59e-07,64;UBERON:0003075,6.59e-07,64;UBERON:0007284,6.59e-07,64;UBERON:0003080,8.19e-07,40|phase1_expression=0.480446541314382,0.348975407639361,0,0.30246421130683,1.50268718983904,0.503637815735669,0.467225281191051,2.32421982194837,0.281577444303333,0.234064526321993,0.171217968225505,0.239316476986009,0.856003649656029,0.611942816932982,0,0,0,0.630924330716475,0.822686601634433,0.42438965179803,0.340173160604279,0.893618560807968,0,0.319984845586813,0.45881856213434,1.14846392823004,0.430761996159075,0.215471232685889,0,0,0.886922042621219,0.635030673459631,1.23012957516914,0,0.866554859253824,0.664938581433969,0.408338712524738,3.76678467663217,0,0.523523743973798,1.17646297606203,2.73218193983378,0.971020706062307,0.503587271902309,0.202753862439029,0.917733760808408,2.34717403304412,0,0.439372365468944,0.777719596297134,0,0,0,0.725362142011344,1.68046899571232,0.771778308107841,0,1.03134418455488,1.41621522601718,1.05798195854407,0,0,0,0,0,0.7104801149461,0.599200221036809,0,3.83651565541367,3.51015439662396,1.05162480675691,0.285650984403804,0.662605622854841,1.22490799214954,2.1086003624012,1.83843757322004,0,0.893811366596314,0.46081959976873,1.84640802822271,1.73826522844578,3.12548022334056,0.558365998002762,0,0.45839474333043,0.883885756421003,1.13897344639282,0.931997229126503,0.075726193333184,0.529000920747499,1.44932244350839,0,0,1.07940638327563,0.649776417447669,0,0.421333260395256,0.340860645156116,0.519572009205738,0,0.845060518660083,1.28326477414318,2.54805239706646,0,0,0.253359865475099,0.505524445014783,0.68510327831436,0.517875767294343,0.445326417194474,0.173485326766136,0.608930956624282,0.922461989024234,0.301445281105245,0.705532242814229,0.628332956648377,0.247194967734374,0.578397427679647,0,0.323533699894818,0.441683036920787,0.484875253135222,0,2.04946557908083,1.8850203613211,0.255457055208591,0.239630249011841,0.599902730993408,0.127070227073065,0.149790639404823,1.83000241127451,1.7591609295801,0.695297280769106,0.255715457330331,0.62336413367868,0.324482526135515,0.712875546952214,0.497627882440372,0.252722758433675,0.420883711772948,0.780722657776222,0,0.720248519221397,0.30140963567143,1.42876648217788,1.0249097622788,0.937017245597288,1.55222022443409,1.29340795759705,0.945530400839096,0.879755620819744,1.31517439456545,1.11218899690239,1.39300866608867,0.61734640922383,0.398068533636986,0,0.257347907114715,0.852490498186778,1.44988040774851,0.938104239924385,0.540186184383045,0.23674473558521,0.393528463494808,1.23413690309903,0.232533944750408,0,0.233530684734339,0.16455984991348,0.656669856316381,0.56748166682099,0.877199924551994,0.439100230582101,0.134206418760372,0.841159794256509,2.77842453424068,0.330418782983798,0.793351699990633,0.639864751605702,0.696710015581316,0.257734922644187,0.605050573870028,0.22237804384487,0.760902504450237,0.949058123089023,0.658795818896044,0.502670417600539,1.79060824837036,0.779856348476481,0,0.432276099749388,0.199141273254367,0.569003702859245,0.799739588268102,1.1270773567308,0.814605311381257,0.387904974335251,0.561086559122548,0.442655759869801,0.442830443938806,0.470996183524124,0.493588655687202,0.592905254174298,0,0.196558995113203,0.674586337154561,0.811440485554012,0.241177159752417,1.01850340712568,0,0.810676133875177,0.549122826376163,0,0.372140947668503,0.312037673114561,0.505157755894224,0.538192240565737,0,0,0,0.814824882210129,0.678980343100753,0.469380496577004,1.17254380209271,0.714130922658041,0.390267295715598,0.945810864637146,0.44292937929755,0.956728611944923,0.491589944147214,0.863424909329478,1.15719246865209,1.50791283939272,1.63171705145613,0,0.275936746304732,0.963303539926752,0.820481806145422,0.327869890753351,0.757412781613119,0,1.17131623288992,0.215423397732799,0.955875191810208,0.445597348164788,1.13230612315533,0.404810701674894,0.292255857911312,1.18586333383957,2.24924921495265,1.56134093729095,0.534196811001766,0.325773918707152,0.329940245945071,3.98235415019888,0.242780636154981,1.209294227859,0.754420319023592,0.590603785761546,0.922305443831782,1.29214146584111,0.727067458955011,0,0.632073515871632,0,1.03135543248187,0.680879211507576,0.540183282093931,1.16422815404479,0.214337035031592,1.06404140185364,1.60531935841864,1.15184314421485,0.608929898229199,0.469343416127421,0.63549621259146,0.441056796109924,0.32977250588296,1.77610869365496,1.08563264870681,1.19372344003136,0.656563598980245,0.291480836629851,0.927126510052548,0.170870880797853,0.206386867963223,0.925972636848558,0.941842285023455,0.410082683163076,0.686334519619568,0.509935289981566,0.559805809294632,1.38199973804424,0,1.42351197111511,0.609958401380546,0.216010681643603,0.836353184057875,0.655087691238533,0.404593039154462,1.07449492442937,0.523511883968059,0.388844919875379,0.621339313086926,0,0.897099276263873,0.496375471371293,1.16670713006429,1.03327858782185,1.01373675294467,1.40828686374905,1.0416350787516,0.314578033277133,0.483168241652012,0,0.632022241256357,0.405450430580328,0.513554785824136,0.51968329191118,0.895133478337407,0.39736270956253,1.08175904567972,1.18151621739662,0.908698049533329,1.295515713135,0.705783295957884,0.682205165178267,0.865906574762965,0.935015217452552,0.226730383615211,0.443971906748129,0.179427713218951,0,0.579568782096571,0.375364950902364,0.549454872801795,0.428736758158132,0,1.12950368523413,1.38097570952153,0.572895513439397,0.859265911718438,0,1.5107877947794,0.675022500231806,1.35096360967266,0.453142408984205,0.51776031175182,0.62272408550506,0.798049746802062,0.682934423016537,0.729320151204882,0.628839487883947,0.551530525350042,0.44449345560323,0.412070114477788,0.64183841918363,1.26348605881899,0.50695859978048,0.754505365544305,0.187283014939765,1.02440243847791,0.746661096422973,0.952587382566147,0.463537303779422,1.15745532278223,1.23625770240992,1.17759136107518,0.685738504770831,0.887379030796687,1.66905332963125,0.872078499793971,0.941093804153306,0.761531471025089,0.914639864363863,1.05227884575137,1.22223702461276,0.561142271657738,0.949080144993393,0.788035859004508,0,1.08455788830176,0.578719832943424,1.24905288968973,0.467863216890817,0.859484216193193,0,0.661774257358546,0.463735671240843|short_description=p6@Usp3}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:235441
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:E9Q8W9
|association_with_transcript=0bp_to_ENSMUST00000098613_5end
|cluster_id=chr9:66440836..66440848,-
|description=CAGE_peak_6_at_Usp3_5end
|id=chr9:66440836..66440848,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002609,2.62e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0000955,1.06e-08,47;UBERON:0006238,1.06e-08,47;UBERON:0002616,5.67e-08,46;UBERON:0003528,3.28e-07,29;UBERON:0002791,3.28e-07,29;UBERON:0001893,3.28e-07,29;UBERON:0002780,3.95e-07,39;UBERON:0001890,3.95e-07,39;UBERON:0006240,3.95e-07,39;UBERON:0000369,4.82e-07,5;UBERON:0002435,4.82e-07,5;UBERON:0000204,4.82e-07,5;UBERON:0010082,4.82e-07,5;UBERON:0010371,5.57e-07,73;UBERON:0001049,5.68e-07,52;UBERON:0005068,5.68e-07,52;UBERON:0006241,5.68e-07,52;UBERON:0007135,5.68e-07,52;UBERON:0002346,6.59e-07,64;UBERON:0003075,6.59e-07,64;UBERON:0007284,6.59e-07,64;UBERON:0003080,8.19e-07,40
|phase1_expression=0.480446541314382,0.348975407639361,0,0.30246421130683,1.50268718983904,0.503637815735669,0.467225281191051,2.32421982194837,0.281577444303333,0.234064526321993,0.171217968225505,0.239316476986009,0.856003649656029,0.611942816932982,0,0,0,0.630924330716475,0.822686601634433,0.42438965179803,0.340173160604279,0.893618560807968,0,0.319984845586813,0.45881856213434,1.14846392823004,0.430761996159075,0.215471232685889,0,0,0.886922042621219,0.635030673459631,1.23012957516914,0,0.866554859253824,0.664938581433969,0.408338712524738,3.76678467663217,0,0.523523743973798,1.17646297606203,2.73218193983378,0.971020706062307,0.503587271902309,0.202753862439029,0.917733760808408,2.34717403304412,0,0.439372365468944,0.777719596297134,0,0,0,0.725362142011344,1.68046899571232,0.771778308107841,0,1.03134418455488,1.41621522601718,1.05798195854407,0,0,0,0,0,0.7104801149461,0.599200221036809,0,3.83651565541367,3.51015439662396,1.05162480675691,0.285650984403804,0.662605622854841,1.22490799214954,2.1086003624012,1.83843757322004,0,0.893811366596314,0.46081959976873,1.84640802822271,1.73826522844578,3.12548022334056,0.558365998002762,0,0.45839474333043,0.883885756421003,1.13897344639282,0.931997229126503,0.075726193333184,0.529000920747499,1.44932244350839,0,0,1.07940638327563,0.649776417447669,0,0.421333260395256,0.340860645156116,0.519572009205738,0,0.845060518660083,1.28326477414318,2.54805239706646,0,0,0.253359865475099,0.505524445014783,0.68510327831436,0.517875767294343,0.445326417194474,0.173485326766136,0.608930956624282,0.922461989024234,0.301445281105245,0.705532242814229,0.628332956648377,0.247194967734374,0.578397427679647,0,0.323533699894818,0.441683036920787,0.484875253135222,0,2.04946557908083,1.8850203613211,0.255457055208591,0.239630249011841,0.599902730993408,0.127070227073065,0.149790639404823,1.83000241127451,1.7591609295801,0.695297280769106,0.255715457330331,0.62336413367868,0.324482526135515,0.712875546952214,0.497627882440372,0.252722758433675,0.420883711772948,0.780722657776222,0,0.720248519221397,0.30140963567143,1.42876648217788,1.0249097622788,0.937017245597288,1.55222022443409,1.29340795759705,0.945530400839096,0.879755620819744,1.31517439456545,1.11218899690239,1.39300866608867,0.61734640922383,0.398068533636986,0,0.257347907114715,0.852490498186778,1.44988040774851,0.938104239924385,0.540186184383045,0.23674473558521,0.393528463494808,1.23413690309903,0.232533944750408,0,0.233530684734339,0.16455984991348,0.656669856316381,0.56748166682099,0.877199924551994,0.439100230582101,0.134206418760372,0.841159794256509,2.77842453424068,0.330418782983798,0.793351699990633,0.639864751605702,0.696710015581316,0.257734922644187,0.605050573870028,0.22237804384487,0.760902504450237,0.949058123089023,0.658795818896044,0.502670417600539,1.79060824837036,0.779856348476481,0,0.432276099749388,0.199141273254367,0.569003702859245,0.799739588268102,1.1270773567308,0.814605311381257,0.387904974335251,0.561086559122548,0.442655759869801,0.442830443938806,0.470996183524124,0.493588655687202,0.592905254174298,0,0.196558995113203,0.674586337154561,0.811440485554012,0.241177159752417,1.01850340712568,0,0.810676133875177,0.549122826376163,0,0.372140947668503,0.312037673114561,0.505157755894224,0.538192240565737,0,0,0,0.814824882210129,0.678980343100753,0.469380496577004,1.17254380209271,0.714130922658041,0.390267295715598,0.945810864637146,0.44292937929755,0.956728611944923,0.491589944147214,0.863424909329478,1.15719246865209,1.50791283939272,1.63171705145613,0,0.275936746304732,0.963303539926752,0.820481806145422,0.327869890753351,0.757412781613119,0,1.17131623288992,0.215423397732799,0.955875191810208,0.445597348164788,1.13230612315533,0.404810701674894,0.292255857911312,1.18586333383957,2.24924921495265,1.56134093729095,0.534196811001766,0.325773918707152,0.329940245945071,3.98235415019888,0.242780636154981,1.209294227859,0.754420319023592,0.590603785761546,0.922305443831782,1.29214146584111,0.727067458955011,0,0.632073515871632,0,1.03135543248187,0.680879211507576,0.540183282093931,1.16422815404479,0.214337035031592,1.06404140185364,1.60531935841864,1.15184314421485,0.608929898229199,0.469343416127421,0.63549621259146,0.441056796109924,0.32977250588296,1.77610869365496,1.08563264870681,1.19372344003136,0.656563598980245,0.291480836629851,0.927126510052548,0.170870880797853,0.206386867963223,0.925972636848558,0.941842285023455,0.410082683163076,0.686334519619568,0.509935289981566,0.559805809294632,1.38199973804424,0,1.42351197111511,0.609958401380546,0.216010681643603,0.836353184057875,0.655087691238533,0.404593039154462,1.07449492442937,0.523511883968059,0.388844919875379,0.621339313086926,0,0.897099276263873,0.496375471371293,1.16670713006429,1.03327858782185,1.01373675294467,1.40828686374905,1.0416350787516,0.314578033277133,0.483168241652012,0,0.632022241256357,0.405450430580328,0.513554785824136,0.51968329191118,0.895133478337407,0.39736270956253,1.08175904567972,1.18151621739662,0.908698049533329,1.295515713135,0.705783295957884,0.682205165178267,0.865906574762965,0.935015217452552,0.226730383615211,0.443971906748129,0.179427713218951,0,0.579568782096571,0.375364950902364,0.549454872801795,0.428736758158132,0,1.12950368523413,1.38097570952153,0.572895513439397,0.859265911718438,0,1.5107877947794,0.675022500231806,1.35096360967266,0.453142408984205,0.51776031175182,0.62272408550506,0.798049746802062,0.682934423016537,0.729320151204882,0.628839487883947,0.551530525350042,0.44449345560323,0.412070114477788,0.64183841918363,1.26348605881899,0.50695859978048,0.754505365544305,0.187283014939765,1.02440243847791,0.746661096422973,0.952587382566147,0.463537303779422,1.15745532278223,1.23625770240992,1.17759136107518,0.685738504770831,0.887379030796687,1.66905332963125,0.872078499793971,0.941093804153306,0.761531471025089,0.914639864363863,1.05227884575137,1.22223702461276,0.561142271657738,0.949080144993393,0.788035859004508,0,1.08455788830176,0.578719832943424,1.24905288968973,0.467863216890817,0.859484216193193,0,0.661774257358546,0.463735671240843
|short_description=p6@Usp3
}}

Revision as of 12:39, 5 August 2015

Short description:p6@Usp3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Usp3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000098613_5end
EntrezGene:235441
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Usp3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.32
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G12.78
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C40.91
thymus, neonate N07.CNhs11211.713-19D31.30
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of cerebral cortex2.62e-076

Uber anatomy
Ontology termp-valuen
brain1.06e-0847
future brain1.06e-0847
regional part of brain5.67e-0846
brain grey matter3.28e-0729
regional part of telencephalon3.28e-0729
telencephalon3.28e-0729
regional part of forebrain3.95e-0739
forebrain3.95e-0739
future forebrain3.95e-0739
corpus striatum4.82e-075
striatum4.82e-075
ventral part of telencephalon4.82e-075
future corpus striatum4.82e-075
ecto-epithelium5.57e-0773
neural tube5.68e-0752
neural rod5.68e-0752
future spinal cord5.68e-0752
neural keel5.68e-0752
neurectoderm6.59e-0764
neural plate6.59e-0764
presumptive neural plate6.59e-0764
anterior neural tube8.19e-0740
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:66440836..66440848,-&oldid=3900172"