FFCP PHASE1:Mm9::chr4:57607267..57607285,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=847 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:57607267..57607285,+ | |||
|description=CAGE_peak_at_chr4:57607267..57607285,+ | |description=CAGE_peak_at_chr4:57607267..57607285,+ | ||
|id=chr4:57607267..57607285,+ | |id=chr4:57607267..57607285,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!8.84e-09!18;UBERON:0000948!8.84e-09!18;UBERON:0005498!8.84e-09!18;UBERON:0004140!8.84e-09!18;UBERON:0009881!8.84e-09!18;UBERON:0004141!8.84e-09!18;UBERON:0003084!8.84e-09!18;UBERON:0007005!8.84e-09!18;UBERON:0004139!8.84e-09!18;UBERON:0004291!8.84e-09!18;UBERON:0000468!1.55e-08!333;UBERON:0005157!2.44e-08!27;UBERON:0002048!5.85e-08!14;UBERON:0000117!5.85e-08!14;UBERON:0000171!5.85e-08!14;UBERON:0000170!5.85e-08!14;UBERON:0005597!5.85e-08!14;UBERON:0000118!5.85e-08!14;UBERON:0000922!6.43e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.04e-10,18;UBERON:0000948,3.04e-10,18;UBERON:0005498,3.04e-10,18;UBERON:0004140,3.04e-10,18;UBERON:0009881,3.04e-10,18;UBERON:0004141,3.04e-10,18;UBERON:0003084,3.04e-10,18;UBERON:0007005,3.04e-10,18;UBERON:0004139,3.04e-10,18;UBERON:0004291,3.04e-10,18;UBERON:0002048,1.34e-09,14;UBERON:0000117,1.34e-09,14;UBERON:0000171,1.34e-09,14;UBERON:0000170,1.34e-09,14;UBERON:0005597,1.34e-09,14;UBERON:0000118,1.34e-09,14;UBERON:0004535,8.99e-08,23;UBERON:0001009,8.99e-08,23;UBERON:0005153,4.89e-07,17;UBERON:0005178,4.89e-07,17;UBERON:0005181,4.89e-07,17;UBERON:0002224,4.89e-07,17;UBERON:0000915,4.89e-07,17;UBERON:0008947,4.89e-07,17;UBERON:0003258,4.89e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0,0,1.10115880999389,0.766124028511126,0.921639199537461,0.263772575460388,0.0914876436024097,0.52091337055676,0,0,0.45839474333043,0.883885756421003,0.711858403995515,0.745597783301202,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,1.7813056687779,1.38788261412909,3.95805121805784,1.15307748628029,5.27529241934179,16.5800077061344,4.02133092254962,0.494389935468748,2.74738778147832,0,2.42650274921114,1.98757366614354,0.484875253135222,0,0.585561594023094,0.628340120440365,0,0,0,0,3.59497534571574,1.83000241127451,1.63350657746724,1.04294592115366,2.30143911597297,1.87009240103604,2.92034273521964,2.54598409625791,0.497627882440372,0.252722758433675,0.631325567659422,2.21204753036596,0,0.180062129805349,3.31550599238573,2.99360596265843,2.69038812598185,1.3118241438362,2.84573707812917,1.5089759505299,3.40390944302075,2.11141348996739,1.09597866213787,7.78532297831674,2.089512999133,2.67516777330327,1.39323986772945,0,0,0,9.52778553663309,11.9608290590359,7.38254451990161,14.4414288706978,15.5443743080449,14.5011086114136,13.2544348507732,14.2184902741798,24.4039565547384,16.1268652915211,12.8050621981694,5.02626619184305,2.19299981137998,6.80605357402257,3.35516046900929,1.68231958851302,0.92614151141356,0,0,2.13288250535234,5.57368012465052,2.31961430379768,3.22693639397348,3.55804870151792,0.380451252225118,0,0.494096864172033,2.01068167040216,0.795825888164603,0.38992817423824,0,0.216138049874694,0.796565093017469,0,0.799739588268102,2.25415471346161,1.62921062276251,0.581857461502877,2.10407459670956,0.885311519739602,0.295220295959204,1.255989822731,0.246794327843601,0,0.667380422864376,0,0.224862112384854,0,0.241177159752417,0,0.287696137450811,0,0.549122826376163,2.87536413054709,0,1.24815069245824,0.757736633841335,0.179397413521912,0.482443521363367,1.29327233116623,0.189491411770485,6.84452901056509,8.14776411720903,7.51008794523207,8.5428191295326,3.33261097240419,9.17128144931655,15.1329738341943,17.0527811029557,16.5832959403787,3.76885623846197,5.87128938344045,2.4590339958857,0,0,0.983528546038072,0.275936746304732,2.24770825982909,2.34423373184406,0.327869890753351,0.504941854408746,0.315508219416257,0,1.93881057959519,0,0,0.283076530788832,0,0.876767573733936,0,3.53453448063988,1.41940085208269,0.178065603667255,1.46598263418218,0.659880491890142,0,0.485561272309963,0.604647113929502,0,0,0,0.258428293168221,0.363533729477506,1.06949213515416,0.316036757935816,0,0,2.38307724027652,1.98067203434441,0.129358683782755,0.428674070063185,0.177340233642274,1.24858172321449,0.493647061806363,0,0.23467170806371,0.21183207086382,0,0.49465875882444,1.45317984026315,1.08563264870681,0.596861720015682,0.328281799490123,0.291480836629851,3.33765543618917,0,0,1.29636169158798,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0.632671987162271,3.04979200690273,3.02414954301044,3.13632444021703,2.83871332870031,5.66430254816247,2.23164330458407,0.523511883968059,0.259229946583586,0,0,1.94371509857172,0.496375471371293,1.75006069509643,1.03327858782185,4.05494701177868,5.39843297770468,7.16124116641726,3.35549902162275,0.724752362478018,1.15212002503146,0,0,0.308132871494482,0,0.358053391334963,0.79472541912506,0.240390899039938,0,0.403865799792591,0,0.504130925684203,0.194915761479505,0,0.233753804363138,0,0,0,0,0.19318959403219,0.375364950902364,1.09890974560359,0.214368379079066,0,3.95326289831947,1.84130094602871,2.86447756719698,0.343706364687375,0,0.755393897389701,0.675022500231806,2.70192721934532,0,0.51776031175182,0,2.39414924040619,0.341467211508268,1.94485373654635,0.209613162627982,0,1.33348036680969,1.23621034343337,1.92551525755089,0.758091635291392,0.25347929989024,1.88626341386076,1.591905626988,1.34452820050225,1.43588672389033,1.42888107384922,1.39061191133827,1.54327376370964,2.06042950401653,1.76638704161277,1.71434626192708,1.06485483695602,2.38436189947321,1.16277133305863,0.752875043322645,0.676916863133412,1.64635175585495,1.31534855718921,1.90125759384206,2.80571135828869,1.66089025373844,1.77308068276014,1.22769312950907,0.619747364743864,1.54325288784913,0.999242311751784,1.63752125911786,0.214871054048298,1.14772999241306,0.220591419119515,0.695603506861264 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0,0,1.10115880999389,0.766124028511126,0.921639199537461,0.263772575460388,0.0914876436024097,0.52091337055676,0,0,0.45839474333043,0.883885756421003,0.711858403995515,0.745597783301202,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,1.7813056687779,1.38788261412909,3.95805121805784,1.15307748628029,5.27529241934179,16.5800077061344,4.02133092254962,0.494389935468748,2.74738778147832,0,2.42650274921114,1.98757366614354,0.484875253135222,0,0.585561594023094,0.628340120440365,0,0,0,0,3.59497534571574,1.83000241127451,1.63350657746724,1.04294592115366,2.30143911597297,1.87009240103604,2.92034273521964,2.54598409625791,0.497627882440372,0.252722758433675,0.631325567659422,2.21204753036596,0,0.180062129805349,3.31550599238573,2.99360596265843,2.69038812598185,1.3118241438362,2.84573707812917,1.5089759505299,3.40390944302075,2.11141348996739,1.09597866213787,7.78532297831674,2.089512999133,2.67516777330327,1.39323986772945,0,0,0,9.52778553663309,11.9608290590359,7.38254451990161,14.4414288706978,15.5443743080449,14.5011086114136,13.2544348507732,14.2184902741798,24.4039565547384,16.1268652915211,12.8050621981694,5.02626619184305,2.19299981137998,6.80605357402257,3.35516046900929,1.68231958851302,0.92614151141356,0,0,2.13288250535234,5.57368012465052,2.31961430379768,3.22693639397348,3.55804870151792,0.380451252225118,0,0.494096864172033,2.01068167040216,0.795825888164603,0.38992817423824,0,0.216138049874694,0.796565093017469,0,0.799739588268102,2.25415471346161,1.62921062276251,0.581857461502877,2.10407459670956,0.885311519739602,0.295220295959204,1.255989822731,0.246794327843601,0,0.667380422864376,0,0.224862112384854,0,0.241177159752417,0,0.287696137450811,0,0.549122826376163,2.87536413054709,0,1.24815069245824,0.757736633841335,0.179397413521912,0.482443521363367,1.29327233116623,0.189491411770485,6.84452901056509,8.14776411720903,7.51008794523207,8.5428191295326,3.33261097240419,9.17128144931655,15.1329738341943,17.0527811029557,16.5832959403787,3.76885623846197,5.87128938344045,2.4590339958857,0,0,0.983528546038072,0.275936746304732,2.24770825982909,2.34423373184406,0.327869890753351,0.504941854408746,0.315508219416257,0,1.93881057959519,0,0,0.283076530788832,0,0.876767573733936,0,3.53453448063988,1.41940085208269,0.178065603667255,1.46598263418218,0.659880491890142,0,0.485561272309963,0.604647113929502,0,0,0,0.258428293168221,0.363533729477506,1.06949213515416,0.316036757935816,0,0,2.38307724027652,1.98067203434441,0.129358683782755,0.428674070063185,0.177340233642274,1.24858172321449,0.493647061806363,0,0.23467170806371,0.21183207086382,0,0.49465875882444,1.45317984026315,1.08563264870681,0.596861720015682,0.328281799490123,0.291480836629851,3.33765543618917,0,0,1.29636169158798,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0.632671987162271,3.04979200690273,3.02414954301044,3.13632444021703,2.83871332870031,5.66430254816247,2.23164330458407,0.523511883968059,0.259229946583586,0,0,1.94371509857172,0.496375471371293,1.75006069509643,1.03327858782185,4.05494701177868,5.39843297770468,7.16124116641726,3.35549902162275,0.724752362478018,1.15212002503146,0,0,0.308132871494482,0,0.358053391334963,0.79472541912506,0.240390899039938,0,0.403865799792591,0,0.504130925684203,0.194915761479505,0,0.233753804363138,0,0,0,0,0.19318959403219,0.375364950902364,1.09890974560359,0.214368379079066,0,3.95326289831947,1.84130094602871,2.86447756719698,0.343706364687375,0,0.755393897389701,0.675022500231806,2.70192721934532,0,0.51776031175182,0,2.39414924040619,0.341467211508268,1.94485373654635,0.209613162627982,0,1.33348036680969,1.23621034343337,1.92551525755089,0.758091635291392,0.25347929989024,1.88626341386076,1.591905626988,1.34452820050225,1.43588672389033,1.42888107384922,1.39061191133827,1.54327376370964,2.06042950401653,1.76638704161277,1.71434626192708,1.06485483695602,2.38436189947321,1.16277133305863,0.752875043322645,0.676916863133412,1.64635175585495,1.31534855718921,1.90125759384206,2.80571135828869,1.66089025373844,1.77308068276014,1.22769312950907,0.619747364743864,1.54325288784913,0.999242311751784,1.63752125911786,0.214871054048298,1.14772999241306,0.220591419119515,0.695603506861264 | ||
|short_description=p@chr4:57607267..57607285,+ | |short_description=p@chr4:57607267..57607285,+ | ||
}} | }} |
Latest revision as of 15:06, 5 August 2015
Short description: | p@chr4:57607267..57607285, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:57607267..57607285, + |
Coexpression cluster: | MCL_coexpression_mm9:847 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.04e-10 | 18 |
heart | 3.04e-10 | 18 |
primitive heart tube | 3.04e-10 | 18 |
primary heart field | 3.04e-10 | 18 |
anterior lateral plate mesoderm | 3.04e-10 | 18 |
heart tube | 3.04e-10 | 18 |
heart primordium | 3.04e-10 | 18 |
cardiac mesoderm | 3.04e-10 | 18 |
cardiogenic plate | 3.04e-10 | 18 |
heart rudiment | 3.04e-10 | 18 |
lung | 1.34e-09 | 14 |
respiratory tube | 1.34e-09 | 14 |
respiration organ | 1.34e-09 | 14 |
pair of lungs | 1.34e-09 | 14 |
lung primordium | 1.34e-09 | 14 |
lung bud | 1.34e-09 | 14 |
cardiovascular system | 8.99e-08 | 23 |
circulatory system | 8.99e-08 | 23 |
epithelial bud | 4.89e-07 | 17 |
thoracic cavity element | 4.89e-07 | 17 |
thoracic segment organ | 4.89e-07 | 17 |
thoracic cavity | 4.89e-07 | 17 |
thoracic segment of trunk | 4.89e-07 | 17 |
respiratory primordium | 4.89e-07 | 17 |
endoderm of foregut | 4.89e-07 | 17 |